RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 RHPN1Q8TCX5 695 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 PA2G4Q9UQ80 394 aaKnown RBP12.62□□□□□ -0.39
TOP3B-210ENST00000444502 ATP7BP35670 1465 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 KCNQ3O43525 872 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
TOP3B-210ENST00000444502 AATKQ6ZMQ8 1374 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 SNRKQ9NRH2 765 aa12.62□□□□□ -0.39
TOP3B-210ENST00000444502 ADGRB1O14514 1584 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 USP19O94966 1318 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
TOP3B-210ENST00000444502 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
TOP3B-210ENST00000444502 MCM2P49736 904 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
TOP3B-210ENST00000444502 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 FIBPO43427 364 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 MARCH6O60337 910 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 GSPT1P15170 499 aaKnown RBP12.61□□□□□ -0.39
TOP3B-210ENST00000444502 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
TOP3B-210ENST00000444502 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
TOP3B-210ENST00000444502 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 STK3Q13188 491 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 PTPRMP28827 1452 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
TOP3B-210ENST00000444502 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
TOP3B-210ENST00000444502 RFC4P35249 363 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
TOP3B-210ENST00000444502 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 PRPF40BQ6NWY9 871 aaKnown RBP12.6□□□□□ -0.39
TOP3B-210ENST00000444502 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 NLRP1Q9C000 1473 aa12.6□□□□□ -0.39
TOP3B-210ENST00000444502 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-210ENST00000444502 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
TOP3B-210ENST00000444502 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
TOP3B-210ENST00000444502 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
TOP3B-210ENST00000444502 ERICH2A1L162 156 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
TOP3B-210ENST00000444502 RBM5P52756 815 aaKnown RBP eCLIP12.59□□□□□ -0.39
TOP3B-210ENST00000444502 SNX21Q969T3 373 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
TOP3B-210ENST00000444502 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.39
TOP3B-210ENST00000444502 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 USP6P35125 1406 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 A1BGP04217 495 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 SMAP1Q8IYB5 467 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 PRDM4Q9UKN5 801 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 CYP46A1Q9Y6A2 500 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
TOP3B-210ENST00000444502 TEX13AQ9BXU3 409 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-210ENST00000444502 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 ATP2B1P20020 1258 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-210ENST00000444502 PIK3C2BO00750 1634 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 DTNBO60941 627 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
TOP3B-210ENST00000444502 NBPF5PQ86XG9 351 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-210ENST00000444502 ECHDC1Q9NTX5 307 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
TOP3B-210ENST00000444502 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
TOP3B-210ENST00000444502 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.42e-9■■■■□ 23.1
TOP3B-210ENST00000444502 PDRG1Q9NUG6 133 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 USP21Q9UK80 565 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
TOP3B-210ENST00000444502 TRIM29Q14134 588 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms