RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
PMPCB-204ENST00000444457 PPP1R42Q7Z4L9 355 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
PMPCB-204ENST00000444457 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
PMPCB-204ENST00000444457 BTBD11A6QL63 1104 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 GCP02774 474 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 ARHGEF25Q86VW2 580 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 DNAAF4Q8WXU2 420 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 TMX3Q96JJ7 454 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 RAB11FIP3O75154 756 aa22.73■■□□□ 1.23
PMPCB-204ENST00000444457 AMOTQ4VCS5 1084 aa22.73■■□□□ 1.23
PMPCB-204ENST00000444457 MPRIPQ6WCQ1 1025 aa22.73■■□□□ 1.23
PMPCB-204ENST00000444457 ORAI2Q96SN7 254 aa22.73■■□□□ 1.23
PMPCB-204ENST00000444457 IL1RAPL2Q9NP60 686 aa22.73■■□□□ 1.23
PMPCB-204ENST00000444457 CUL4AQ13619 759 aa22.72■■□□□ 1.23
PMPCB-204ENST00000444457 BEND3Q5T5X7 828 aa22.72■■□□□ 1.23
PMPCB-204ENST00000444457 TTC12Q9H892 705 aaPredicted RBP22.72■■□□□ 1.23
PMPCB-204ENST00000444457 CAMTA1Q9Y6Y1 1673 aa22.72■■□□□ 1.23
PMPCB-204ENST00000444457 PI4KAP2A4QPH2 592 aa22.72■■□□□ 1.23
PMPCB-204ENST00000444457 PI4KAP1Q8N8J0 262 aa22.72■■□□□ 1.23
PMPCB-204ENST00000444457 USP25Q9UHP3 1055 aa22.72■■□□□ 1.23
PMPCB-204ENST00000444457 TRPM3Q9HCF6 1732 aaPredicted RBP22.72■■□□□ 1.23
PMPCB-204ENST00000444457 MCM2P49736 904 aa22.71■■□□□ 1.23
PMPCB-204ENST00000444457 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
PMPCB-204ENST00000444457 PDCL2Q8N4E4 241 aa22.71■■□□□ 1.23
PMPCB-204ENST00000444457 OVOS2A0A0G2JMS6 1433 aa22.71■■□□□ 1.23
PMPCB-204ENST00000444457 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
PMPCB-204ENST00000444457 SURF6O75683 361 aaKnown RBP22.71■■□□□ 1.23
PMPCB-204ENST00000444457 NBPF7P0C2Y1 421 aaPredicted RBP22.71■■□□□ 1.23
PMPCB-204ENST00000444457 MCCP23508 829 aa22.7■■□□□ 1.22
PMPCB-204ENST00000444457 C17orf53Q8N3J3 647 aaPredicted RBP22.7■■□□□ 1.22
PMPCB-204ENST00000444457 ANKRD7Q92527 254 aa22.7■■□□□ 1.22
PMPCB-204ENST00000444457 ADCY9O60503 1353 aa22.7■■□□□ 1.22
PMPCB-204ENST00000444457 SRGAP3O43295 1099 aa22.7■■□□□ 1.22
PMPCB-204ENST00000444457 ADCY5O95622 1261 aa22.7■■□□□ 1.22
PMPCB-204ENST00000444457 C1orf141Q5JVX7 400 aa22.7■■□□□ 1.22
PMPCB-204ENST00000444457 FAM177BA6PVY3 158 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 ANXA1P04083 346 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 NUTM1Q86Y26 1132 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 RHPN1Q8TCX5 695 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 INTS4Q96HW7 963 aaKnown RBP22.69■■□□□ 1.22
PMPCB-204ENST00000444457 ANO2Q9NQ90 1003 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 NEK4P51957 841 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 MPNDQ8N594 471 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 ANKRD24Q8TF21 1146 aa22.69■■□□□ 1.22
PMPCB-204ENST00000444457 SIPA1L3O60292 1781 aaPredicted RBP22.68■■□□□ 1.22
PMPCB-204ENST00000444457 ANAPC15P60006 121 aa22.68■■□□□ 1.22
PMPCB-204ENST00000444457 PALD1Q9ULE6 856 aa22.68■■□□□ 1.22
PMPCB-204ENST00000444457 GADD45BO75293 160 aaPredicted RBP22.67■■□□□ 1.22
PMPCB-204ENST00000444457 KIF1BPQ96EK5 621 aa22.67■■□□□ 1.22
PMPCB-204ENST00000444457 DIAPH3Q9NSV4 1193 aa22.67■■□□□ 1.22
PMPCB-204ENST00000444457 DBF4Q9UBU7 674 aaPredicted RBP22.67■■□□□ 1.22
PMPCB-204ENST00000444457 RGPD5Q99666 1765 aa22.66■■□□□ 1.22
PMPCB-204ENST00000444457 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
PMPCB-204ENST00000444457 SPDYE4A6NLX3 237 aa22.65■■□□□ 1.22
PMPCB-204ENST00000444457 PI4K2BQ8TCG2 481 aa22.65■■□□□ 1.22
PMPCB-204ENST00000444457 CTIFO43310 598 aaKnown RBP22.65■■□□□ 1.22
PMPCB-204ENST00000444457 TAF3Q5VWG9 929 aa22.65■■□□□ 1.22
PMPCB-204ENST00000444457 IL17RAQ96F46 866 aa22.65■■□□□ 1.22
PMPCB-204ENST00000444457 KIF1AQ12756 1690 aa22.65■■□□□ 1.22
PMPCB-204ENST00000444457 HEG1Q9ULI3 1381 aa22.64■■□□□ 1.22
PMPCB-204ENST00000444457 ADAMTS7Q9UKP4 1686 aa22.64■■□□□ 1.21
PMPCB-204ENST00000444457 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
PMPCB-204ENST00000444457 CCDC183Q5T5S1 534 aa22.64■■□□□ 1.21
PMPCB-204ENST00000444457 USP48Q86UV5 1035 aa22.64■■□□□ 1.21
PMPCB-204ENST00000444457 TMEM87AQ8NBN3 555 aa22.64■■□□□ 1.21
PMPCB-204ENST00000444457 KIAA1524Q8TCG1 905 aa22.64■■□□□ 1.21
PMPCB-204ENST00000444457 RIOK3O14730 519 aaKnown RBP22.63■■□□□ 1.21
PMPCB-204ENST00000444457 EPB41L2O43491 1005 aaKnown RBP22.63■■□□□ 1.21
PMPCB-204ENST00000444457 HSPA2P54652 639 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 FEZ1Q99689 392 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 IL25Q9H293 177 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 HSP90AB4PQ58FF6 505 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 CRYBG1Q9Y4K1 1723 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 TCHHQ07283 1943 aa22.63■■□□□ 1.21
PMPCB-204ENST00000444457 U2AF2P26368 475 aaKnown RBP eCLIP22.62■■□□□ 1.212e-10■■□□□ 11.9
PMPCB-204ENST00000444457 CHAF1AQ13111 956 aaPredicted RBP22.62■■□□□ 1.21
PMPCB-204ENST00000444457 KDM4AO75164 1064 aa22.62■■□□□ 1.21
PMPCB-204ENST00000444457 PROSER3Q2NL68 480 aa22.62■■□□□ 1.21
PMPCB-204ENST00000444457 MTX1Q13505 466 aa22.61■■□□□ 1.21
PMPCB-204ENST00000444457 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
PMPCB-204ENST00000444457 GDPD2Q9HCC8 539 aa22.61■■□□□ 1.21
PMPCB-204ENST00000444457 MAP3K2Q9Y2U5 619 aa22.61■■□□□ 1.21
PMPCB-204ENST00000444457 ALDH1L1O75891 902 aa22.61■■□□□ 1.21
PMPCB-204ENST00000444457 MAP4K4O95819 1239 aaPredicted RBP22.61■■□□□ 1.21
PMPCB-204ENST00000444457 HCLS1P14317 486 aaPredicted RBP22.61■■□□□ 1.21
PMPCB-204ENST00000444457 GTF2E1P29083 439 aaPredicted RBP22.61■■□□□ 1.21
PMPCB-204ENST00000444457 KLHL34Q8N239 644 aa22.61■■□□□ 1.21
PMPCB-204ENST00000444457 BBXQ8WY36 941 aaPredicted RBP22.61■■□□□ 1.21
PMPCB-204ENST00000444457 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
PMPCB-204ENST00000444457 TPM3P06753 285 aa22.6■■□□□ 1.21
PMPCB-204ENST00000444457 KSR2Q6VAB6 950 aa22.6■■□□□ 1.21
PMPCB-204ENST00000444457 ALS2Q96Q42 1657 aa22.59■■□□□ 1.21
PMPCB-204ENST00000444457 PRAMEF22A3QJZ6 481 aa22.59■■□□□ 1.21
PMPCB-204ENST00000444457 KCNF1Q9H3M0 494 aa22.59■■□□□ 1.21
PMPCB-204ENST00000444457 WDR33Q9C0J8 1336 aaKnown RBP22.59■■□□□ 1.21
PMPCB-204ENST00000444457 USP42Q9H9J4 1324 aaKnown RBP22.59■■□□□ 1.21
PMPCB-204ENST00000444457 HSPA4P34932 840 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms