RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 PHACTR3Q96KR7 559 aa26.62■■□□□ 1.85
UBE2F-215ENST00000441728 RSPH6AQ9H0K4 717 aa26.62■■□□□ 1.85
UBE2F-215ENST00000441728 KCNQ3O43525 872 aa26.61■■□□□ 1.85
UBE2F-215ENST00000441728 SNRPA1P09661 255 aaKnown RBP26.6■■□□□ 1.85
UBE2F-215ENST00000441728 PRPF40BQ6NWY9 871 aaKnown RBP26.6■■□□□ 1.85
UBE2F-215ENST00000441728 LTBP3Q9NS15 1303 aa26.6■■□□□ 1.85
UBE2F-215ENST00000441728 COL11A2P13942 1736 aaPredicted RBP26.59■■□□□ 1.85
UBE2F-215ENST00000441728 NEFMP07197 916 aa26.59■■□□□ 1.85
UBE2F-215ENST00000441728 PIP4K2AP48426 406 aaPredicted RBP26.59■■□□□ 1.85
UBE2F-215ENST00000441728 USP16Q9Y5T5 823 aa26.59■■□□□ 1.85
UBE2F-215ENST00000441728 SRGNP10124 158 aa26.58■■□□□ 1.85
UBE2F-215ENST00000441728 CLEC4GQ6UXB4 293 aa26.58■■□□□ 1.85
UBE2F-215ENST00000441728 CACNA1SQ13698 1873 aa26.57■■□□□ 1.84
UBE2F-215ENST00000441728 COL13A1Q5TAT6 717 aaPredicted RBP26.57■■□□□ 1.84
UBE2F-215ENST00000441728 MCM10Q7L590 875 aa26.57■■□□□ 1.84
UBE2F-215ENST00000441728 FER1L6Q2WGJ9 1857 aa26.57■■□□□ 1.84
UBE2F-215ENST00000441728 BCORQ6W2J9 1755 aa26.56■■□□□ 1.84
UBE2F-215ENST00000441728 TNS4Q8IZW8 715 aa26.56■■□□□ 1.84
UBE2F-215ENST00000441728 DICER1Q9UPY3 1922 aaKnown RBP26.56■■□□□ 1.84
UBE2F-215ENST00000441728 GTF2E1P29083 439 aaPredicted RBP26.55■■□□□ 1.84
UBE2F-215ENST00000441728 CCDC93Q567U6 631 aa26.55■■□□□ 1.84
UBE2F-215ENST00000441728 TPTE2Q6XPS3 522 aa26.55■■□□□ 1.84
UBE2F-215ENST00000441728 CHADLQ6NUI6 762 aa26.54■■□□□ 1.84
UBE2F-215ENST00000441728 NIP7Q9Y221 180 aaKnown RBP eCLIP26.54■■□□□ 1.84
UBE2F-215ENST00000441728 IQCA1LA6NCM1 817 aa26.53■■□□□ 1.84
UBE2F-215ENST00000441728 FAM177BA6PVY3 158 aa26.53■■□□□ 1.84
UBE2F-215ENST00000441728 CAPN15O75808 1086 aa26.53■■□□□ 1.84
UBE2F-215ENST00000441728 DDNO94850 711 aaPredicted RBP26.53■■□□□ 1.84
UBE2F-215ENST00000441728 HSPA1AP0DMV8 641 aaKnown RBP26.53■■□□□ 1.84
UBE2F-215ENST00000441728 HSPA1BP0DMV9 641 aaKnown RBP26.53■■□□□ 1.84
UBE2F-215ENST00000441728 NPR1P16066 1061 aa26.53■■□□□ 1.84
UBE2F-215ENST00000441728 PRAMEF22A3QJZ6 481 aa26.52■■□□□ 1.84
UBE2F-215ENST00000441728 POTECB2RU33 542 aa26.52■■□□□ 1.84
UBE2F-215ENST00000441728 SLX4Q8IY92 1834 aa26.52■■□□□ 1.84
UBE2F-215ENST00000441728 HTATSF1O43719 755 aaKnown RBP26.5■■□□□ 1.83
UBE2F-215ENST00000441728 PPP2R1AP30153 589 aa26.5■■□□□ 1.83
UBE2F-215ENST00000441728 DCTN1Q14203 1278 aa26.5■■□□□ 1.83
UBE2F-215ENST00000441728 ARFGEF2Q9Y6D5 1785 aa26.49■■□□□ 1.83
UBE2F-215ENST00000441728 TAF7Q15545 349 aaPredicted RBP26.48■■□□□ 1.83
UBE2F-215ENST00000441728 CREBZFQ9NS37 354 aa26.48■■□□□ 1.83
UBE2F-215ENST00000441728 FKBP4Q02790 459 aaKnown RBP eCLIP26.47■■□□□ 1.83
UBE2F-215ENST00000441728 RGL2O15211 777 aa26.46■■□□□ 1.83
UBE2F-215ENST00000441728 ALDH1B1P30837 517 aa26.46■■□□□ 1.83
UBE2F-215ENST00000441728 RTKN2Q8IZC4 609 aa26.46■■□□□ 1.83
UBE2F-215ENST00000441728 MKRN1Q9UHC7 482 aaKnown RBP26.46■■□□□ 1.83
UBE2F-215ENST00000441728 LDHDQ86WU2 507 aa26.45■■□□□ 1.82
UBE2F-215ENST00000441728 NGEFQ8N5V2 710 aa26.45■■□□□ 1.82
UBE2F-215ENST00000441728 PNISRQ8TF01 805 aaKnown RBP26.45■■□□□ 1.82
UBE2F-215ENST00000441728 EAPPQ56P03 285 aaPredicted RBP26.44■■□□□ 1.82
UBE2F-215ENST00000441728 NYXQ9GZU5 481 aa26.44■■□□□ 1.82
UBE2F-215ENST00000441728 ZNF277Q9NRM2 450 aaPredicted RBP26.44■■□□□ 1.82
UBE2F-215ENST00000441728 CLEC11AQ9Y240 323 aa26.44■■□□□ 1.82
UBE2F-215ENST00000441728 NBPF26B4DH59 902 aa26.43■■□□□ 1.82
UBE2F-215ENST00000441728 NBPF10Q6P3W6 841 aaKnown RBP26.43■■□□□ 1.82
UBE2F-215ENST00000441728 NBPF15Q8N660 670 aa26.43■■□□□ 1.82
UBE2F-215ENST00000441728 POTEIP0CG38 1075 aa26.42■■□□□ 1.82
UBE2F-215ENST00000441728 POTEJP0CG39 1038 aa26.42■■□□□ 1.82
UBE2F-215ENST00000441728 KIF6Q6ZMV9 814 aa26.42■■□□□ 1.82
UBE2F-215ENST00000441728 TAF1DQ9H5J8 278 aaPredicted RBP26.42■■□□□ 1.82
UBE2F-215ENST00000441728 MIS18AQ9NYP9 233 aa26.42■■□□□ 1.82
UBE2F-215ENST00000441728 C7orf43Q8WVR3 580 aa26.41■■□□□ 1.82
UBE2F-215ENST00000441728 L3MBTL3Q96JM7 780 aaPredicted RBP26.41■■□□□ 1.82
UBE2F-215ENST00000441728 HACL1Q9UJ83 578 aa26.41■■□□□ 1.82
UBE2F-215ENST00000441728 SCN4AP35499 1836 aa26.4■■□□□ 1.82
UBE2F-215ENST00000441728 KLRG2A4D1S0 409 aaPredicted RBP26.4■■□□□ 1.82
UBE2F-215ENST00000441728 HLFQ16534 295 aa26.4■■□□□ 1.82
UBE2F-215ENST00000441728 JDP2Q8WYK2 163 aa26.4■■□□□ 1.82
UBE2F-215ENST00000441728 IARSP41252 1262 aaKnown RBP26.39■■□□□ 1.82
UBE2F-215ENST00000441728 RPGRQ92834 1020 aaKnown RBP26.39■■□□□ 1.82
UBE2F-215ENST00000441728 RRP7AQ9Y3A4 280 aaKnown RBP26.39■■□□□ 1.82
UBE2F-215ENST00000441728 LAMB4A4D0S4 1761 aa26.38■■□□□ 1.81
UBE2F-215ENST00000441728 SYNE4Q8N205 404 aa26.38■■□□□ 1.81
UBE2F-215ENST00000441728 ZNF541Q9H0D2 1346 aa26.38■■□□□ 1.81
UBE2F-215ENST00000441728 AIDAQ96BJ3 306 aa26.37■■□□□ 1.81
UBE2F-215ENST00000441728 PNNQ9H307 717 aaKnown RBP26.37■■□□□ 1.81
UBE2F-215ENST00000441728 MAPK8IP3Q9UPT6 1336 aa26.37■■□□□ 1.81
UBE2F-215ENST00000441728 ERVV-1B6SEH8 477 aa26.36■■□□□ 1.81
UBE2F-215ENST00000441728 EPHX2P34913 555 aa26.36■■□□□ 1.81
UBE2F-215ENST00000441728 OLFM4Q6UX06 510 aa26.36■■□□□ 1.81
UBE2F-215ENST00000441728 PNMA8AQ86V59 439 aaPredicted RBP26.36■■□□□ 1.81
UBE2F-215ENST00000441728 TMEM88BA6NKF7 163 aa26.35■■□□□ 1.81
UBE2F-215ENST00000441728 MYL6BP14649 208 aa26.35■■□□□ 1.81
UBE2F-215ENST00000441728 CC2D2BQ6DHV5 1058 aa26.35■■□□□ 1.81
UBE2F-215ENST00000441728 NUTM1Q86Y26 1132 aa26.35■■□□□ 1.81
UBE2F-215ENST00000441728 TMX4Q9H1E5 349 aaPredicted RBP26.35■■□□□ 1.81
UBE2F-215ENST00000441728 MAP3K15Q6ZN16 1313 aa26.35■■□□□ 1.81
UBE2F-215ENST00000441728 EIF6P56537 245 aaKnown RBP26.34■■□□□ 1.81
UBE2F-215ENST00000441728 CNTNAP1P78357 1384 aa26.33■■□□□ 1.81
UBE2F-215ENST00000441728 GPTP24298 496 aa26.33■■□□□ 1.81
UBE2F-215ENST00000441728 LMOD1P29536 600 aaPredicted RBP26.33■■□□□ 1.81
UBE2F-215ENST00000441728 RNF123Q5XPI4 1314 aa26.33■■□□□ 1.81
UBE2F-215ENST00000441728 GPC2Q8N158 579 aa26.32■■□□□ 1.8
UBE2F-215ENST00000441728 ZBTB3Q9H5J0 574 aa26.32■■□□□ 1.8
UBE2F-215ENST00000441728 GJA3Q9Y6H8 435 aa26.32■■□□□ 1.8
UBE2F-215ENST00000441728 PASKQ96RG2 1323 aa26.32■■□□□ 1.8
UBE2F-215ENST00000441728 NFE2L2Q16236 605 aa26.31■■□□□ 1.8
UBE2F-215ENST00000441728 PSMD1Q99460 953 aa26.31■■□□□ 1.8
UBE2F-215ENST00000441728 ABCC12Q96J65 1359 aa26.31■■□□□ 1.8
UBE2F-215ENST00000441728 FZD9O00144 591 aa26.3■■□□□ 1.8
UBE2F-215ENST00000441728 EIF4A1P60842 406 aaKnown RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms