RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 EIF2S2P20042 333 aaKnown RBP22.98■■□□□ 1.27
CCDC188-201ENST00000439765 PIM2Q9P1W9 311 aa22.98■■□□□ 1.27
CCDC188-201ENST00000439765 DZIP3Q86Y13 1208 aaKnown RBP22.97■■□□□ 1.27
CCDC188-201ENST00000439765 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
CCDC188-201ENST00000439765 NUP98P52948 1817 aa22.97■■□□□ 1.27
CCDC188-201ENST00000439765 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
CCDC188-201ENST00000439765 MYL6BP14649 208 aa22.96■■□□□ 1.27
CCDC188-201ENST00000439765 GPBP1L1Q9HC44 474 aaPredicted RBP22.96■■□□□ 1.27
CCDC188-201ENST00000439765 NGEFQ8N5V2 710 aa22.95■■□□□ 1.26
CCDC188-201ENST00000439765 CAMTA2O94983 1202 aa22.94■■□□□ 1.26
CCDC188-201ENST00000439765 SERPINB2P05120 415 aa22.94■■□□□ 1.26
CCDC188-201ENST00000439765 TSR2Q969E8 191 aaKnown RBP22.94■■□□□ 1.26
CCDC188-201ENST00000439765 CHRNA5P30532 468 aa22.93■■□□□ 1.26
CCDC188-201ENST00000439765 DALRD3Q5D0E6 543 aaKnown RBP22.93■■□□□ 1.26
CCDC188-201ENST00000439765 COL11A2P13942 1736 aaPredicted RBP22.93■■□□□ 1.26
CCDC188-201ENST00000439765 ERBB4Q15303 1308 aa22.92■■□□□ 1.26
CCDC188-201ENST00000439765 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
CCDC188-201ENST00000439765 BICDL1Q6ZP65 573 aa22.92■■□□□ 1.26
CCDC188-201ENST00000439765 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
CCDC188-201ENST00000439765 ANXA1P04083 346 aa22.92■■□□□ 1.26
CCDC188-201ENST00000439765 PROSER3Q2NL68 480 aa22.92■■□□□ 1.26
CCDC188-201ENST00000439765 DUSP27Q5VZP5 1158 aa22.92■■□□□ 1.26
CCDC188-201ENST00000439765 CACNA1SQ13698 1873 aa22.91■■□□□ 1.26
CCDC188-201ENST00000439765 ANKRD36CQ5JPF3 1778 aa22.91■■□□□ 1.26
CCDC188-201ENST00000439765 CARMIL3Q8ND23 1372 aa22.91■■□□□ 1.26
CCDC188-201ENST00000439765 HDGFL1Q5TGJ6 251 aa22.91■■□□□ 1.26
CCDC188-201ENST00000439765 ARFGEF2Q9Y6D5 1785 aa22.9■■□□□ 1.26
CCDC188-201ENST00000439765 IL16Q14005 1332 aa22.9■■□□□ 1.26
CCDC188-201ENST00000439765 ELL2O00472 640 aaPredicted RBP22.9■■□□□ 1.26
CCDC188-201ENST00000439765 TBC1D9BQ66K14 1250 aa22.9■■□□□ 1.26
CCDC188-201ENST00000439765 HOXB7P09629 217 aa22.89■■□□□ 1.25
CCDC188-201ENST00000439765 PDIA6Q15084 440 aa22.89■■□□□ 1.25
CCDC188-201ENST00000439765 ZNF526Q8TF50 670 aaPredicted RBP22.89■■□□□ 1.25
CCDC188-201ENST00000439765 TTLL7Q6ZT98 887 aa22.88■■□□□ 1.25
CCDC188-201ENST00000439765 C8orf58Q8NAV2 365 aa22.88■■□□□ 1.25
CCDC188-201ENST00000439765 CHPF2Q9P2E5 772 aa22.88■■□□□ 1.25
CCDC188-201ENST00000439765 FANCIQ9NVI1 1328 aa22.87■■□□□ 1.25
CCDC188-201ENST00000439765 KIF6Q6ZMV9 814 aa22.87■■□□□ 1.25
CCDC188-201ENST00000439765 WDR63Q8IWG1 891 aa22.87■■□□□ 1.25
CCDC188-201ENST00000439765 DICER1Q9UPY3 1922 aaKnown RBP22.87■■□□□ 1.25
CCDC188-201ENST00000439765 FER1L6Q2WGJ9 1857 aa22.87■■□□□ 1.25
CCDC188-201ENST00000439765 LRP10Q7Z4F1 713 aa22.86■■□□□ 1.25
CCDC188-201ENST00000439765 ZNF652Q9Y2D9 606 aa22.86■■□□□ 1.25
CCDC188-201ENST00000439765 ZBTB3Q9H5J0 574 aa22.85■■□□□ 1.25
CCDC188-201ENST00000439765 MAP3K15Q6ZN16 1313 aa22.85■■□□□ 1.25
CCDC188-201ENST00000439765 HLFQ16534 295 aa22.85■■□□□ 1.25
CCDC188-201ENST00000439765 TSPYL6Q8N831 410 aa22.85■■□□□ 1.25
CCDC188-201ENST00000439765 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
CCDC188-201ENST00000439765 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCDC188-201ENST00000439765 TNRC6CQ9HCJ0 1690 aaKnown RBP22.84■■□□□ 1.25
CCDC188-201ENST00000439765 PRR5LQ6MZQ0 368 aa22.84■■□□□ 1.25
CCDC188-201ENST00000439765 PDZRN3Q9UPQ7 1066 aa22.84■■□□□ 1.25
CCDC188-201ENST00000439765 TIAM2Q8IVF5 1701 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 ZNF521Q96K83 1311 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 KIF3CO14782 793 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 RGL2O15211 777 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 AIMP1Q12904 312 aaKnown RBP22.83■■□□□ 1.25
CCDC188-201ENST00000439765 C9orf131Q5VYM1 1079 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 CLEC4GQ6UXB4 293 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 C2CD5Q86YS7 1000 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 SETDB2Q96T68 719 aa22.83■■□□□ 1.25
CCDC188-201ENST00000439765 H0YIN7 160 aa22.82■■□□□ 1.24
CCDC188-201ENST00000439765 TTLL6Q8N841 843 aa22.82■■□□□ 1.24
CCDC188-201ENST00000439765 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
CCDC188-201ENST00000439765 BRIP1Q9BX63 1249 aa22.82■■□□□ 1.24
CCDC188-201ENST00000439765 DBF4Q9UBU7 674 aaPredicted RBP22.82■■□□□ 1.24
CCDC188-201ENST00000439765 SLX4Q8IY92 1834 aa22.82■■□□□ 1.24
CCDC188-201ENST00000439765 HNRNPUQ00839 825 aaKnown RBP eCLIP22.81■■□□□ 1.24
CCDC188-201ENST00000439765 YTHDC1Q96MU7 727 aaKnown RBP22.81■■□□□ 1.24
CCDC188-201ENST00000439765 NIP7Q9Y221 180 aaKnown RBP eCLIP22.81■■□□□ 1.24
CCDC188-201ENST00000439765 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
CCDC188-201ENST00000439765 PDE6BP35913 854 aa22.8■■□□□ 1.24
CCDC188-201ENST00000439765 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
CCDC188-201ENST00000439765 COPS6Q7L5N1 327 aa22.8■■□□□ 1.24
CCDC188-201ENST00000439765 NPHP1O15259 732 aa22.79■■□□□ 1.24
CCDC188-201ENST00000439765 CCDC24Q8N4L8 307 aa22.79■■□□□ 1.24
CCDC188-201ENST00000439765 CNBD1Q8NA66 436 aa22.79■■□□□ 1.24
CCDC188-201ENST00000439765 CACNA1FO60840 1977 aa22.79■■□□□ 1.24
CCDC188-201ENST00000439765 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
CCDC188-201ENST00000439765 RNF181Q9P0P0 153 aa22.79■■□□□ 1.24
CCDC188-201ENST00000439765 CEP350Q5VT06 3117 aa22.78■■□□□ 1.24
CCDC188-201ENST00000439765 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
CCDC188-201ENST00000439765 GOLGA2Q08379 1002 aa22.78■■□□□ 1.24
CCDC188-201ENST00000439765 ZC3H4Q9UPT8 1303 aaKnown RBP22.77■■□□□ 1.24
CCDC188-201ENST00000439765 TCERG1O14776 1098 aaKnown RBP22.77■■□□□ 1.24
CCDC188-201ENST00000439765 GPTP24298 496 aa22.77■■□□□ 1.24
CCDC188-201ENST00000439765 EXOSC9Q06265 439 aaKnown RBP22.77■■□□□ 1.24
CCDC188-201ENST00000439765 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
CCDC188-201ENST00000439765 NBPF5PQ86XG9 351 aaPredicted RBP22.77■■□□□ 1.24
CCDC188-201ENST00000439765 HYPKQ9NX55 129 aa22.77■■□□□ 1.24
CCDC188-201ENST00000439765 ST5P78524 1137 aa22.76■■□□□ 1.23
CCDC188-201ENST00000439765 GIGYF2Q6Y7W6 1299 aaKnown RBP22.76■■□□□ 1.23
CCDC188-201ENST00000439765 UBN2Q6ZU65 1347 aa22.76■■□□□ 1.23
CCDC188-201ENST00000439765 RASSF7Q02833 373 aa22.74■■□□□ 1.23
CCDC188-201ENST00000439765 PHAXQ9H814 394 aaKnown RBP22.74■■□□□ 1.23
CCDC188-201ENST00000439765 NMRK2Q9NPI5 230 aa22.74■■□□□ 1.23
CCDC188-201ENST00000439765 LMNB1P20700 586 aa22.73■■□□□ 1.23
CCDC188-201ENST00000439765 ZNF622Q969S3 477 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCDC188-201ENST00000439765 TOMM70O94826 608 aa22.73■■□□□ 1.23
CCDC188-201ENST00000439765 SRGNP10124 158 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms