RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PROSER3Q2NL68 480 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 TTLL7Q6ZT98 887 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 SETDB2Q96T68 719 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 HYPKQ9NX55 129 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 CHPF2Q9P2E5 772 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
HSPG2-206ENST00000439717 CARMIL3Q8ND23 1372 aa15.25■□□□□ 0.03
HSPG2-206ENST00000439717 ANXA1P04083 346 aa15.25■□□□□ 0.03
HSPG2-206ENST00000439717 SERPINB2P05120 415 aa15.25■□□□□ 0.03
HSPG2-206ENST00000439717 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-206ENST00000439717 BICDL1Q6ZP65 573 aa15.25■□□□□ 0.03
HSPG2-206ENST00000439717 TSPYL6Q8N831 410 aa15.25■□□□□ 0.03
HSPG2-206ENST00000439717 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-206ENST00000439717 E9PSI1 815 aa15.24■□□□□ 0.03
HSPG2-206ENST00000439717 HLFQ16534 295 aa15.24■□□□□ 0.03
HSPG2-206ENST00000439717 COPS6Q7L5N1 327 aa15.24■□□□□ 0.03
HSPG2-206ENST00000439717 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
HSPG2-206ENST00000439717 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
HSPG2-206ENST00000439717 TGFB2P61812 414 aa15.23■□□□□ 0.03
HSPG2-206ENST00000439717 GIGYF2Q6Y7W6 1299 aaKnown RBP15.23■□□□□ 0.03
HSPG2-206ENST00000439717 NLGN2Q8NFZ4 835 aa15.23■□□□□ 0.03
HSPG2-206ENST00000439717 ZBTB3Q9H5J0 574 aa15.23■□□□□ 0.03
HSPG2-206ENST00000439717 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
HSPG2-206ENST00000439717 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
HSPG2-206ENST00000439717 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
HSPG2-206ENST00000439717 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
HSPG2-206ENST00000439717 ATP10DQ9P241 1426 aa15.22■□□□□ 0.03
HSPG2-206ENST00000439717 VAMP4O75379 141 aa15.21■□□□□ 0.03
HSPG2-206ENST00000439717 SLFN5Q08AF3 891 aa15.21■□□□□ 0.03
HSPG2-206ENST00000439717 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
HSPG2-206ENST00000439717 HSP90AB3PQ58FF7 597 aa15.21■□□□□ 0.03
HSPG2-206ENST00000439717 STK31Q9BXU1 1019 aa15.21■□□□□ 0.03
HSPG2-206ENST00000439717 ANKRD13DQ6ZTN6 518 aa15.2■□□□□ 0.02
HSPG2-206ENST00000439717 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
HSPG2-206ENST00000439717 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
HSPG2-206ENST00000439717 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
HSPG2-206ENST00000439717 ZNF34Q8IZ26 560 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 NYXQ9GZU5 481 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 NUP98P52948 1817 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
HSPG2-206ENST00000439717 NPHP1O15259 732 aa15.18■□□□□ 0.02
HSPG2-206ENST00000439717 ST5P78524 1137 aa15.18■□□□□ 0.02
HSPG2-206ENST00000439717 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
HSPG2-206ENST00000439717 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
HSPG2-206ENST00000439717 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
HSPG2-206ENST00000439717 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
HSPG2-206ENST00000439717 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
HSPG2-206ENST00000439717 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
HSPG2-206ENST00000439717 DPEP1P16444 411 aa15.17■□□□□ 0.02
HSPG2-206ENST00000439717 PDE6BP35913 854 aa15.17■□□□□ 0.02
HSPG2-206ENST00000439717 HNRNPUQ00839 825 aaKnown RBP eCLIP15.17■□□□□ 0.02
HSPG2-206ENST00000439717 TCIRG1Q13488 830 aa15.17■□□□□ 0.02
HSPG2-206ENST00000439717 PHAXQ9H814 394 aaKnown RBP15.17■□□□□ 0.02
HSPG2-206ENST00000439717 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
HSPG2-206ENST00000439717 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
HSPG2-206ENST00000439717 A0A0G2JLW4 131 aa15.16■□□□□ 0.02
HSPG2-206ENST00000439717 GPTP24298 496 aa15.16■□□□□ 0.02
HSPG2-206ENST00000439717 GPR162Q16538 588 aa15.16■□□□□ 0.02
HSPG2-206ENST00000439717 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
HSPG2-206ENST00000439717 RIC3Q7Z5B4 369 aa15.16■□□□□ 0.02
HSPG2-206ENST00000439717 CDCA7LQ96GN5 454 aa15.16■□□□□ 0.02
HSPG2-206ENST00000439717 KCNA3P22001 575 aa15.15■□□□□ 0.02
HSPG2-206ENST00000439717 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
HSPG2-206ENST00000439717 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
HSPG2-206ENST00000439717 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
HSPG2-206ENST00000439717 H0YIN7 160 aa15.14■□□□□ 0.01
HSPG2-206ENST00000439717 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
HSPG2-206ENST00000439717 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
HSPG2-206ENST00000439717 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
HSPG2-206ENST00000439717 C2CD5Q86YS7 1000 aa15.14■□□□□ 0.01
HSPG2-206ENST00000439717 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
HSPG2-206ENST00000439717 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
HSPG2-206ENST00000439717 PIM2Q9P1W9 311 aa15.14■□□□□ 0.01
HSPG2-206ENST00000439717 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 N4BP2Q86UW6 1770 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-206ENST00000439717 FAM177BA6PVY3 158 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 NTSR2O95665 410 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-206ENST00000439717 CHRNA5P30532 468 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
HSPG2-206ENST00000439717 KSR2Q6VAB6 950 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 CCDC24Q8N4L8 307 aa15.13■□□□□ 0.01
HSPG2-206ENST00000439717 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
HSPG2-206ENST00000439717 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
HSPG2-206ENST00000439717 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
HSPG2-206ENST00000439717 KLRG2A4D1S0 409 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-206ENST00000439717 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
HSPG2-206ENST00000439717 FLIIQ13045 1269 aa15.12■□□□□ 0.01
HSPG2-206ENST00000439717 G2E3Q7L622 706 aa15.12■□□□□ 0.01
HSPG2-206ENST00000439717 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-206ENST00000439717 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
HSPG2-206ENST00000439717 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
HSPG2-206ENST00000439717 PI4KAP2A4QPH2 592 aa15.11■□□□□ 0.01
HSPG2-206ENST00000439717 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 1727.6 ms