RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 TWISTNBQ3B726 338 aaPredicted RBP25.16■■□□□ 1.62
SEMA3B-206ENST00000439487 CACNA1FO60840 1977 aa25.16■■□□□ 1.62
SEMA3B-206ENST00000439487 KIF13BQ9NQT8 1826 aa25.15■■□□□ 1.62
SEMA3B-206ENST00000439487 POLRMTO00411 1230 aaKnown RBP25.15■■□□□ 1.62
SEMA3B-206ENST00000439487 KIF6Q6ZMV9 814 aa25.15■■□□□ 1.62
SEMA3B-206ENST00000439487 DBF4Q9UBU7 674 aaPredicted RBP25.15■■□□□ 1.62
SEMA3B-206ENST00000439487 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.62
SEMA3B-206ENST00000439487 HLFQ16534 295 aa25.14■■□□□ 1.62
SEMA3B-206ENST00000439487 COPS6Q7L5N1 327 aa25.14■■□□□ 1.62
SEMA3B-206ENST00000439487 MAP3K15Q6ZN16 1313 aa25.13■■□□□ 1.61
SEMA3B-206ENST00000439487 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
SEMA3B-206ENST00000439487 XAGE3Q8WTP9 111 aa25.13■■□□□ 1.61
SEMA3B-206ENST00000439487 ZBTB3Q9H5J0 574 aa25.13■■□□□ 1.61
SEMA3B-206ENST00000439487 NRXN2Q9P2S2 1712 aa25.12■■□□□ 1.61
SEMA3B-206ENST00000439487 CCDC30Q5VVM6 783 aa25.12■■□□□ 1.61
SEMA3B-206ENST00000439487 CDCA7LQ96GN5 454 aa25.12■■□□□ 1.61
SEMA3B-206ENST00000439487 ZNF652Q9Y2D9 606 aa25.12■■□□□ 1.61
SEMA3B-206ENST00000439487 ERVV-1B6SEH8 477 aa25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 E9PSI1 815 aa25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 TCERG1O14776 1098 aaKnown RBP25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 SLFN5Q08AF3 891 aa25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 NLGN2Q8NFZ4 835 aa25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 CD2APQ9Y5K6 639 aa25.11■■□□□ 1.61
SEMA3B-206ENST00000439487 VAMP4O75379 141 aa25.1■■□□□ 1.61
SEMA3B-206ENST00000439487 SERPINB2P05120 415 aa25.1■■□□□ 1.61
SEMA3B-206ENST00000439487 SETDB2Q96T68 719 aa25.1■■□□□ 1.61
SEMA3B-206ENST00000439487 CHMP4AQ9BY43 222 aa25.1■■□□□ 1.61
SEMA3B-206ENST00000439487 HYPKQ9NX55 129 aa25.1■■□□□ 1.61
SEMA3B-206ENST00000439487 N4BP2Q86UW6 1770 aaPredicted RBP25.1■■□□□ 1.61
SEMA3B-206ENST00000439487 RGL2O15211 777 aa25.09■■□□□ 1.61
SEMA3B-206ENST00000439487 ANKRD36CQ5JPF3 1778 aa25.08■■□□□ 1.61
SEMA3B-206ENST00000439487 PHAXQ9H814 394 aaKnown RBP25.08■■□□□ 1.61
SEMA3B-206ENST00000439487 C10orf71Q711Q0 1435 aa25.07■■□□□ 1.6
SEMA3B-206ENST00000439487 NIP7Q9Y221 180 aaKnown RBP eCLIP25.07■■□□□ 1.6
SEMA3B-206ENST00000439487 CARMIL3Q8ND23 1372 aa25.06■■□□□ 1.6
SEMA3B-206ENST00000439487 KIAA1551Q9HCM1 1747 aa25.06■■□□□ 1.6
SEMA3B-206ENST00000439487 GIGYF2Q6Y7W6 1299 aaKnown RBP25.06■■□□□ 1.6
SEMA3B-206ENST00000439487 ARFGEF2Q9Y6D5 1785 aa25.05■■□□□ 1.6
SEMA3B-206ENST00000439487 ANKRD31Q8N7Z5 1873 aa25.05■■□□□ 1.6
SEMA3B-206ENST00000439487 STK31Q9BXU1 1019 aa25.05■■□□□ 1.6
SEMA3B-206ENST00000439487 ATP10DQ9P241 1426 aa25.03■■□□□ 1.6
SEMA3B-206ENST00000439487 FAM177BA6PVY3 158 aa25.03■■□□□ 1.6
SEMA3B-206ENST00000439487 GPTP24298 496 aa25.03■■□□□ 1.6
SEMA3B-206ENST00000439487 ANKRD13DQ6ZTN6 518 aa25.03■■□□□ 1.6
SEMA3B-206ENST00000439487 TRMT2AQ8IZ69 625 aaKnown RBP25.03■■□□□ 1.6
SEMA3B-206ENST00000439487 CCDC24Q8N4L8 307 aa25.03■■□□□ 1.6
SEMA3B-206ENST00000439487 SLC4A2P04920 1241 aa25.02■■□□□ 1.6
SEMA3B-206ENST00000439487 PRR5LQ6MZQ0 368 aa25.02■■□□□ 1.6
SEMA3B-206ENST00000439487 ZNF34Q8IZ26 560 aa25.02■■□□□ 1.6
SEMA3B-206ENST00000439487 PLBD2Q8NHP8 589 aa25.02■■□□□ 1.6
SEMA3B-206ENST00000439487 G2E3Q7L622 706 aa25.01■■□□□ 1.59
SEMA3B-206ENST00000439487 NBPF5PQ86XG9 351 aaPredicted RBP25.01■■□□□ 1.59
SEMA3B-206ENST00000439487 NPHP1O15259 732 aa25■■□□□ 1.59
SEMA3B-206ENST00000439487 CNBD1Q8NA66 436 aa25■■□□□ 1.59
SEMA3B-206ENST00000439487 UBN2Q6ZU65 1347 aa25■■□□□ 1.59
SEMA3B-206ENST00000439487 PXDNLA1KZ92 1463 aa25■■□□□ 1.59
SEMA3B-206ENST00000439487 BRCA1P38398 1863 aaKnown RBP25■■□□□ 1.59
SEMA3B-206ENST00000439487 A0A0G2JLW4 131 aa24.99■■□□□ 1.59
SEMA3B-206ENST00000439487 TGFB2P61812 414 aa24.99■■□□□ 1.59
SEMA3B-206ENST00000439487 TCIRG1Q13488 830 aa24.99■■□□□ 1.59
SEMA3B-206ENST00000439487 HSP90AB3PQ58FF7 597 aa24.99■■□□□ 1.59
SEMA3B-206ENST00000439487 DPEP1P16444 411 aa24.98■■□□□ 1.59
SEMA3B-206ENST00000439487 RIC3Q7Z5B4 369 aa24.98■■□□□ 1.59
SEMA3B-206ENST00000439487 WWC3Q9ULE0 1092 aa24.98■■□□□ 1.59
SEMA3B-206ENST00000439487 SUSD4Q5VX71 490 aa24.97■■□□□ 1.59
SEMA3B-206ENST00000439487 TPTE2Q6XPS3 522 aa24.97■■□□□ 1.59
SEMA3B-206ENST00000439487 CHRNA5P30532 468 aa24.96■■□□□ 1.59
SEMA3B-206ENST00000439487 ST5P78524 1137 aa24.96■■□□□ 1.59
SEMA3B-206ENST00000439487 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
SEMA3B-206ENST00000439487 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.59
SEMA3B-206ENST00000439487 DDX58O95786 925 aaKnown RBP24.95■■□□□ 1.58
SEMA3B-206ENST00000439487 PARP10Q53GL7 1025 aa24.95■■□□□ 1.58
SEMA3B-206ENST00000439487 ZBED9Q6R2W3 1325 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 ATP5J2-PTCD1G3V325 749 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 GTF2E1P29083 439 aaPredicted RBP24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 FLIIQ13045 1269 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 NUTM1Q86Y26 1132 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 ZNF428Q96B54 188 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 BRIP1Q9BX63 1249 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 NYXQ9GZU5 481 aa24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 GOLGB1Q14789 3259 aaKnown RBP24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 COL11A2P13942 1736 aaPredicted RBP24.94■■□□□ 1.58
SEMA3B-206ENST00000439487 PI4KAP2A4QPH2 592 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 DCAF8L1A6NGE4 600 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 KCNA3P22001 575 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 GPR162Q16538 588 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 KSR2Q6VAB6 950 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 PPP1R42Q7Z4L9 355 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 NLRP10Q86W26 655 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 PI4KAP1Q8N8J0 262 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 ISCA1Q9BUE6 129 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 MAP3K2Q9Y2U5 619 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 CACNA1SQ13698 1873 aa24.93■■□□□ 1.58
SEMA3B-206ENST00000439487 NTSR2O95665 410 aa24.92■■□□□ 1.58
SEMA3B-206ENST00000439487 ERFEQ4G0M1 354 aa24.92■■□□□ 1.58
SEMA3B-206ENST00000439487 C2CD5Q86YS7 1000 aa24.92■■□□□ 1.58
SEMA3B-206ENST00000439487 MYD88Q99836 296 aa24.92■■□□□ 1.58
SEMA3B-206ENST00000439487 ADCY9O60503 1353 aa24.92■■□□□ 1.58
SEMA3B-206ENST00000439487 IBTKQ9P2D0 1353 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms