RNA–Protein interactions for RNA: ENST00000437480.1

GLI3-203, Transcript of GLI family zinc finger 3, humanhuman

TSL 2 BASIC

Gene GLI3, Length 451 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-203ENST00000437480 CEMIPQ8WUJ3 1361 aa28.7■■■□□ 2.18
GLI3-203ENST00000437480 PCNTO95613 3336 aa28.7■■■□□ 2.18
GLI3-203ENST00000437480 POTEIP0CG38 1075 aa28.69■■■□□ 2.18
GLI3-203ENST00000437480 POTEJP0CG39 1038 aa28.69■■■□□ 2.18
GLI3-203ENST00000437480 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
GLI3-203ENST00000437480 CCDC93Q567U6 631 aa28.69■■■□□ 2.18
GLI3-203ENST00000437480 CLEC4GQ6UXB4 293 aa28.69■■■□□ 2.18
GLI3-203ENST00000437480 LDHDQ86WU2 507 aa28.69■■■□□ 2.18
GLI3-203ENST00000437480 COL3A1P02461 1466 aaPredicted RBP28.68■■■□□ 2.18
GLI3-203ENST00000437480 NPC1L1Q9UHC9 1359 aa28.68■■■□□ 2.18
GLI3-203ENST00000437480 KCNQ3O43525 872 aa28.67■■■□□ 2.18
GLI3-203ENST00000437480 ANKRD31Q8N7Z5 1873 aa28.66■■■□□ 2.18
GLI3-203ENST00000437480 NPR1P16066 1061 aa28.66■■■□□ 2.18
GLI3-203ENST00000437480 L3MBTL3Q96JM7 780 aaPredicted RBP28.66■■■□□ 2.18
GLI3-203ENST00000437480 USP16Q9Y5T5 823 aa28.66■■■□□ 2.18
GLI3-203ENST00000437480 TAF1DQ9H5J8 278 aaPredicted RBP28.65■■■□□ 2.18
GLI3-203ENST00000437480 COL11A2P13942 1736 aaPredicted RBP28.64■■■□□ 2.18
GLI3-203ENST00000437480 PRKAR2BP31323 418 aa28.64■■■□□ 2.18
GLI3-203ENST00000437480 C7orf43Q8WVR3 580 aa28.64■■■□□ 2.18
GLI3-203ENST00000437480 CFAP53Q96M91 514 aa28.64■■■□□ 2.18
GLI3-203ENST00000437480 CNTNAP1P78357 1384 aa28.63■■■□□ 2.17
GLI3-203ENST00000437480 SNRPA1P09661 255 aaKnown RBP28.63■■■□□ 2.17
GLI3-203ENST00000437480 PIP4K2AP48426 406 aaPredicted RBP28.63■■■□□ 2.17
GLI3-203ENST00000437480 FKBP4Q02790 459 aaKnown RBP eCLIP28.63■■■□□ 2.17
GLI3-203ENST00000437480 TPTE2Q6XPS3 522 aa28.63■■■□□ 2.17
GLI3-203ENST00000437480 RTF1Q92541 710 aaKnown RBP28.63■■■□□ 2.17
GLI3-203ENST00000437480 PHACTR3Q96KR7 559 aa28.63■■■□□ 2.17
GLI3-203ENST00000437480 FER1L6Q2WGJ9 1857 aa28.62■■■□□ 2.17
GLI3-203ENST00000437480 PASKQ96RG2 1323 aa28.62■■■□□ 2.17
GLI3-203ENST00000437480 RTKN2Q8IZC4 609 aa28.61■■■□□ 2.17
GLI3-203ENST00000437480 AIDAQ96BJ3 306 aa28.61■■■□□ 2.17
GLI3-203ENST00000437480 NUDCQ9Y266 331 aa28.61■■■□□ 2.17
GLI3-203ENST00000437480 VIRMAQ69YN4 1812 aaKnown RBP28.61■■■□□ 2.17
GLI3-203ENST00000437480 CCDC88AQ3V6T2 1871 aa28.6■■■□□ 2.17
GLI3-203ENST00000437480 RGL2O15211 777 aa28.6■■■□□ 2.17
GLI3-203ENST00000437480 EAPPQ56P03 285 aaPredicted RBP28.6■■■□□ 2.17
GLI3-203ENST00000437480 RSPH6AQ9H0K4 717 aa28.6■■■□□ 2.17
GLI3-203ENST00000437480 NIP7Q9Y221 180 aaKnown RBP eCLIP28.6■■■□□ 2.17
GLI3-203ENST00000437480 KLRG2A4D1S0 409 aaPredicted RBP28.59■■■□□ 2.17
GLI3-203ENST00000437480 TMEM88BA6NKF7 163 aa28.59■■■□□ 2.17
GLI3-203ENST00000437480 ZNF277Q9NRM2 450 aaPredicted RBP28.59■■■□□ 2.17
GLI3-203ENST00000437480 HACL1Q9UJ83 578 aa28.59■■■□□ 2.17
GLI3-203ENST00000437480 PRAMEF22A3QJZ6 481 aa28.58■■■□□ 2.17
GLI3-203ENST00000437480 PRDM10Q9NQV6 1147 aa28.58■■■□□ 2.17
GLI3-203ENST00000437480 CLEC11AQ9Y240 323 aa28.58■■■□□ 2.17
GLI3-203ENST00000437480 FOXN1O15353 648 aa28.57■■■□□ 2.16
GLI3-203ENST00000437480 SLX4Q8IY92 1834 aa28.57■■■□□ 2.16
GLI3-203ENST00000437480 GTF2E1P29083 439 aaPredicted RBP28.56■■■□□ 2.16
GLI3-203ENST00000437480 ALDH1B1P30837 517 aa28.56■■■□□ 2.16
GLI3-203ENST00000437480 ZNF541Q9H0D2 1346 aa28.56■■■□□ 2.16
GLI3-203ENST00000437480 DICER1Q9UPY3 1922 aaKnown RBP28.56■■■□□ 2.16
GLI3-203ENST00000437480 EPHX2P34913 555 aa28.55■■■□□ 2.16
GLI3-203ENST00000437480 CTCFP49711 727 aaPredicted RBP28.55■■■□□ 2.16
GLI3-203ENST00000437480 PNMA8AQ86V59 439 aaPredicted RBP28.55■■■□□ 2.16
GLI3-203ENST00000437480 FAM177BA6PVY3 158 aa28.54■■■□□ 2.16
GLI3-203ENST00000437480 ITGBL1O95965 494 aaPredicted RBP28.54■■■□□ 2.16
GLI3-203ENST00000437480 MCM10Q7L590 875 aa28.54■■■□□ 2.16
GLI3-203ENST00000437480 SIPA1L3O60292 1781 aaPredicted RBP28.54■■■□□ 2.16
GLI3-203ENST00000437480 U2AF1L5P0DN76 240 aaPredicted RBP28.53■■■□□ 2.16
GLI3-203ENST00000437480 IARSP41252 1262 aaKnown RBP28.53■■■□□ 2.16
GLI3-203ENST00000437480 VEGFBP49765 207 aa28.53■■■□□ 2.16
GLI3-203ENST00000437480 U2AF1Q01081 240 aaKnown RBP eCLIP28.53■■■□□ 2.16
GLI3-203ENST00000437480 NBPF26B4DH59 902 aa28.52■■■□□ 2.16
GLI3-203ENST00000437480 NBPF10Q6P3W6 841 aaKnown RBP28.52■■■□□ 2.16
GLI3-203ENST00000437480 NBPF15Q8N660 670 aa28.52■■■□□ 2.16
GLI3-203ENST00000437480 OLFM4Q6UX06 510 aa28.51■■■□□ 2.15
GLI3-203ENST00000437480 SYNE4Q8N205 404 aa28.51■■■□□ 2.15
GLI3-203ENST00000437480 BCORQ6W2J9 1755 aa28.51■■■□□ 2.15
GLI3-203ENST00000437480 FZD9O00144 591 aa28.5■■■□□ 2.15
GLI3-203ENST00000437480 HTATSF1O43719 755 aaKnown RBP28.5■■■□□ 2.15
GLI3-203ENST00000437480 JDP2Q8WYK2 163 aa28.5■■■□□ 2.15
GLI3-203ENST00000437480 RNF123Q5XPI4 1314 aa28.49■■■□□ 2.15
GLI3-203ENST00000437480 CNTROBQ8N137 903 aa28.49■■■□□ 2.15
GLI3-203ENST00000437480 GPC2Q8N158 579 aa28.49■■■□□ 2.15
GLI3-203ENST00000437480 NYXQ9GZU5 481 aa28.48■■■□□ 2.15
GLI3-203ENST00000437480 ARFGEF2Q9Y6D5 1785 aa28.47■■■□□ 2.15
GLI3-203ENST00000437480 DCTN1Q14203 1278 aa28.47■■■□□ 2.15
GLI3-203ENST00000437480 HLFQ16534 295 aa28.47■■■□□ 2.15
GLI3-203ENST00000437480 MAP1SQ66K74 1059 aaPredicted RBP28.47■■■□□ 2.15
GLI3-203ENST00000437480 CC2D2BQ6DHV5 1058 aa28.47■■■□□ 2.15
GLI3-203ENST00000437480 PSMD1Q99460 953 aa28.47■■■□□ 2.15
GLI3-203ENST00000437480 WBP1LQ9NX94 342 aa28.47■■■□□ 2.15
GLI3-203ENST00000437480 SCN4AP35499 1836 aa28.46■■■□□ 2.15
GLI3-203ENST00000437480 TAF7Q15545 349 aaPredicted RBP28.46■■■□□ 2.15
GLI3-203ENST00000437480 DEFB115Q30KQ5 88 aa28.46■■■□□ 2.15
GLI3-203ENST00000437480 RASSF10A6NK89 507 aa28.45■■■□□ 2.14
GLI3-203ENST00000437480 EIF6P56537 245 aaKnown RBP28.45■■■□□ 2.14
GLI3-203ENST00000437480 LMOD1P29536 600 aaPredicted RBP28.44■■■□□ 2.14
GLI3-203ENST00000437480 ABT1Q9ULW3 272 aaKnown RBP28.44■■■□□ 2.14
GLI3-203ENST00000437480 LBX1P52954 281 aa28.43■■■□□ 2.14
GLI3-203ENST00000437480 CRY2Q49AN0 593 aa28.43■■■□□ 2.14
GLI3-203ENST00000437480 ERVV-1B6SEH8 477 aa28.42■■■□□ 2.14
GLI3-203ENST00000437480 MAP2K1Q02750 393 aaPredicted RBP28.42■■■□□ 2.14
GLI3-203ENST00000437480 GRIPAP1Q4V328 841 aa28.42■■■□□ 2.14
GLI3-203ENST00000437480 NGEFQ8N5V2 710 aa28.42■■■□□ 2.14
GLI3-203ENST00000437480 RPGRQ92834 1020 aaKnown RBP28.42■■■□□ 2.14
GLI3-203ENST00000437480 GJA3Q9Y6H8 435 aa28.42■■■□□ 2.14
GLI3-203ENST00000437480 NUTM1Q86Y26 1132 aa28.41■■■□□ 2.14
GLI3-203ENST00000437480 CACNA1SQ13698 1873 aa28.4■■■□□ 2.14
GLI3-203ENST00000437480 NEFMP07197 916 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 813.9 ms