RNA–Protein interactions for RNA: ENST00000435616.5

CDCA7-205, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-205ENST00000435616 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
CDCA7-205ENST00000435616 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
CDCA7-205ENST00000435616 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
CDCA7-205ENST00000435616 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
CDCA7-205ENST00000435616 CCDC93Q567U6 631 aa17.39■□□□□ 0.37
CDCA7-205ENST00000435616 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
CDCA7-205ENST00000435616 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
CDCA7-205ENST00000435616 SLX4Q8IY92 1834 aa17.38■□□□□ 0.37
CDCA7-205ENST00000435616 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
CDCA7-205ENST00000435616 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
CDCA7-205ENST00000435616 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
CDCA7-205ENST00000435616 MKRN1Q9UHC7 482 aaKnown RBP17.38■□□□□ 0.37
CDCA7-205ENST00000435616 NPR1P16066 1061 aa17.37■□□□□ 0.37
CDCA7-205ENST00000435616 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
CDCA7-205ENST00000435616 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
CDCA7-205ENST00000435616 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
CDCA7-205ENST00000435616 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
CDCA7-205ENST00000435616 KLRG2A4D1S0 409 aaPredicted RBP17.36■□□□□ 0.37
CDCA7-205ENST00000435616 TMEM88BA6NKF7 163 aa17.36■□□□□ 0.37
CDCA7-205ENST00000435616 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
CDCA7-205ENST00000435616 C7orf43Q8WVR3 580 aa17.36■□□□□ 0.37
CDCA7-205ENST00000435616 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
CDCA7-205ENST00000435616 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDCA7-205ENST00000435616 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
CDCA7-205ENST00000435616 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
CDCA7-205ENST00000435616 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
CDCA7-205ENST00000435616 KIF7Q2M1P5 1343 aa17.35■□□□□ 0.37
CDCA7-205ENST00000435616 CACNA1SQ13698 1873 aa17.35■□□□□ 0.37
CDCA7-205ENST00000435616 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
CDCA7-205ENST00000435616 FOXN1O15353 648 aa17.34■□□□□ 0.37
CDCA7-205ENST00000435616 A1BGP04217 495 aa17.34■□□□□ 0.37
CDCA7-205ENST00000435616 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
CDCA7-205ENST00000435616 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
CDCA7-205ENST00000435616 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
CDCA7-205ENST00000435616 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.37
CDCA7-205ENST00000435616 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
CDCA7-205ENST00000435616 TPTE2Q6XPS3 522 aa17.33■□□□□ 0.36
CDCA7-205ENST00000435616 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
CDCA7-205ENST00000435616 ITGBL1O95965 494 aaPredicted RBP17.32■□□□□ 0.36
CDCA7-205ENST00000435616 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
CDCA7-205ENST00000435616 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
CDCA7-205ENST00000435616 ALDH1B1P30837 517 aa17.31■□□□□ 0.36
CDCA7-205ENST00000435616 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
CDCA7-205ENST00000435616 WBP1LQ9NX94 342 aa17.31■□□□□ 0.36
CDCA7-205ENST00000435616 EPHX2P34913 555 aa17.3■□□□□ 0.36
CDCA7-205ENST00000435616 VEGFBP49765 207 aa17.3■□□□□ 0.36
CDCA7-205ENST00000435616 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
CDCA7-205ENST00000435616 GPC2Q8N158 579 aa17.3■□□□□ 0.36
CDCA7-205ENST00000435616 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
CDCA7-205ENST00000435616 FZD9O00144 591 aa17.29■□□□□ 0.36
CDCA7-205ENST00000435616 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
CDCA7-205ENST00000435616 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
CDCA7-205ENST00000435616 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
CDCA7-205ENST00000435616 PSMD1Q99460 953 aa17.29■□□□□ 0.36
CDCA7-205ENST00000435616 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
CDCA7-205ENST00000435616 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
CDCA7-205ENST00000435616 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
CDCA7-205ENST00000435616 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
CDCA7-205ENST00000435616 NIP7Q9Y221 180 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDCA7-205ENST00000435616 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
CDCA7-205ENST00000435616 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
CDCA7-205ENST00000435616 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
CDCA7-205ENST00000435616 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.35
CDCA7-205ENST00000435616 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
CDCA7-205ENST00000435616 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
CDCA7-205ENST00000435616 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CDCA7-205ENST00000435616 DEFB115Q30KQ5 88 aa17.26■□□□□ 0.35
CDCA7-205ENST00000435616 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
CDCA7-205ENST00000435616 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
CDCA7-205ENST00000435616 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
CDCA7-205ENST00000435616 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
CDCA7-205ENST00000435616 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
CDCA7-205ENST00000435616 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
CDCA7-205ENST00000435616 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
CDCA7-205ENST00000435616 KCNQ3O43525 872 aa17.25■□□□□ 0.35
CDCA7-205ENST00000435616 CRY2Q49AN0 593 aa17.25■□□□□ 0.35
CDCA7-205ENST00000435616 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
CDCA7-205ENST00000435616 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
CDCA7-205ENST00000435616 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
CDCA7-205ENST00000435616 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
CDCA7-205ENST00000435616 ECE1P42892 770 aa17.23■□□□□ 0.35
CDCA7-205ENST00000435616 LBX1P52954 281 aa17.23■□□□□ 0.35
CDCA7-205ENST00000435616 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
CDCA7-205ENST00000435616 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
CDCA7-205ENST00000435616 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
CDCA7-205ENST00000435616 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
CDCA7-205ENST00000435616 HSPA8P11142 646 aaKnown RBP17.22■□□□□ 0.35
CDCA7-205ENST00000435616 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
CDCA7-205ENST00000435616 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
CDCA7-205ENST00000435616 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
CDCA7-205ENST00000435616 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
CDCA7-205ENST00000435616 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
CDCA7-205ENST00000435616 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDCA7-205ENST00000435616 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
CDCA7-205ENST00000435616 PRAMEF22A3QJZ6 481 aa17.2■□□□□ 0.34
CDCA7-205ENST00000435616 HOXA10P31260 410 aaPredicted RBP17.2■□□□□ 0.34
CDCA7-205ENST00000435616 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
CDCA7-205ENST00000435616 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
CDCA7-205ENST00000435616 BEGAINQ9BUH8 593 aa17.2■□□□□ 0.34
CDCA7-205ENST00000435616 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms