RNA–Protein interactions for RNA: ENST00000435616.5

CDCA7-205, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-205ENST00000435616 NISCHQ9Y2I1 1504 aa32.9■■■□□ 2.86
CDCA7-205ENST00000435616 ABCC9O60706 1549 aa29.86■■■□□ 2.37
CDCA7-205ENST00000435616 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
CDCA7-205ENST00000435616 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
CDCA7-205ENST00000435616 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
CDCA7-205ENST00000435616 NACADO15069 1562 aa28.2■■■□□ 2.11
CDCA7-205ENST00000435616 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
CDCA7-205ENST00000435616 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
CDCA7-205ENST00000435616 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
CDCA7-205ENST00000435616 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
CDCA7-205ENST00000435616 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
CDCA7-205ENST00000435616 SHROOM4Q9ULL8 1493 aa27.39■■□□□ 1.98
CDCA7-205ENST00000435616 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
CDCA7-205ENST00000435616 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
CDCA7-205ENST00000435616 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
CDCA7-205ENST00000435616 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
CDCA7-205ENST00000435616 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
CDCA7-205ENST00000435616 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
CDCA7-205ENST00000435616 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
CDCA7-205ENST00000435616 CUX2O14529 1486 aa26.05■■□□□ 1.76
CDCA7-205ENST00000435616 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
CDCA7-205ENST00000435616 ERCC6Q03468 1493 aa25.89■■□□□ 1.73
CDCA7-205ENST00000435616 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
CDCA7-205ENST00000435616 HMGXB3Q12766 1538 aa25.83■■□□□ 1.72
CDCA7-205ENST00000435616 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
CDCA7-205ENST00000435616 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
CDCA7-205ENST00000435616 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
CDCA7-205ENST00000435616 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
CDCA7-205ENST00000435616 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
CDCA7-205ENST00000435616 NESP48681 1621 aa25.54■■□□□ 1.68
CDCA7-205ENST00000435616 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
CDCA7-205ENST00000435616 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
CDCA7-205ENST00000435616 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
CDCA7-205ENST00000435616 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
CDCA7-205ENST00000435616 KIF21AQ7Z4S6 1674 aa25.25■■□□□ 1.63
CDCA7-205ENST00000435616 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
CDCA7-205ENST00000435616 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
CDCA7-205ENST00000435616 WDR62O43379 1518 aa25.09■■□□□ 1.61
CDCA7-205ENST00000435616 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
CDCA7-205ENST00000435616 WIZO95785 1651 aa24.93■■□□□ 1.58
CDCA7-205ENST00000435616 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
CDCA7-205ENST00000435616 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
CDCA7-205ENST00000435616 CFTRP13569 1480 aa24.83■■□□□ 1.57
CDCA7-205ENST00000435616 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
CDCA7-205ENST00000435616 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
CDCA7-205ENST00000435616 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
CDCA7-205ENST00000435616 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
CDCA7-205ENST00000435616 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
CDCA7-205ENST00000435616 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
CDCA7-205ENST00000435616 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
CDCA7-205ENST00000435616 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
CDCA7-205ENST00000435616 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
CDCA7-205ENST00000435616 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
CDCA7-205ENST00000435616 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
CDCA7-205ENST00000435616 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
CDCA7-205ENST00000435616 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
CDCA7-205ENST00000435616 ARHGEF11O15085 1522 aa24.32■■□□□ 1.48
CDCA7-205ENST00000435616 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
CDCA7-205ENST00000435616 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
CDCA7-205ENST00000435616 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
CDCA7-205ENST00000435616 CHD1O14646 1710 aa24.11■■□□□ 1.45
CDCA7-205ENST00000435616 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.452e-9■■■■□ 25.7
CDCA7-205ENST00000435616 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
CDCA7-205ENST00000435616 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
CDCA7-205ENST00000435616 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
CDCA7-205ENST00000435616 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
CDCA7-205ENST00000435616 SOGA1O94964 1423 aa23.95■■□□□ 1.42
CDCA7-205ENST00000435616 FBLN2P98095 1184 aa23.95■■□□□ 1.42
CDCA7-205ENST00000435616 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
CDCA7-205ENST00000435616 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
CDCA7-205ENST00000435616 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
CDCA7-205ENST00000435616 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
CDCA7-205ENST00000435616 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
CDCA7-205ENST00000435616 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
CDCA7-205ENST00000435616 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
CDCA7-205ENST00000435616 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
CDCA7-205ENST00000435616 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
CDCA7-205ENST00000435616 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
CDCA7-205ENST00000435616 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
CDCA7-205ENST00000435616 CUX1P39880 1505 aa23.79■■□□□ 1.4
CDCA7-205ENST00000435616 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
CDCA7-205ENST00000435616 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
CDCA7-205ENST00000435616 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
CDCA7-205ENST00000435616 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
CDCA7-205ENST00000435616 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
CDCA7-205ENST00000435616 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
CDCA7-205ENST00000435616 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
CDCA7-205ENST00000435616 NUP160Q12769 1436 aa23.47■■□□□ 1.35
CDCA7-205ENST00000435616 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
CDCA7-205ENST00000435616 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
CDCA7-205ENST00000435616 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
CDCA7-205ENST00000435616 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
CDCA7-205ENST00000435616 TOP2BQ02880 1626 aa23.38■■□□□ 1.33
CDCA7-205ENST00000435616 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
CDCA7-205ENST00000435616 ERCC6L2Q5T890 1561 aa23.37■■□□□ 1.33
CDCA7-205ENST00000435616 ERICH3Q5RHP9 1530 aa23.37■■□□□ 1.33
CDCA7-205ENST00000435616 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
CDCA7-205ENST00000435616 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
CDCA7-205ENST00000435616 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
CDCA7-205ENST00000435616 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms