RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 PHAXQ9H814 394 aaKnown RBP21.07■□□□□ 0.96
CTDSPL-204ENST00000435525 PTPRCP08575 1304 aa21.06■□□□□ 0.96
CTDSPL-204ENST00000435525 BRPF1P55201 1214 aaPredicted RBP21.06■□□□□ 0.96
CTDSPL-204ENST00000435525 USPL1Q5W0Q7 1092 aa21.06■□□□□ 0.96
CTDSPL-204ENST00000435525 TTLL7Q6ZT98 887 aa21.06■□□□□ 0.96
CTDSPL-204ENST00000435525 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
CTDSPL-204ENST00000435525 LRP10Q7Z4F1 713 aa21.06■□□□□ 0.96
CTDSPL-204ENST00000435525 CAMTA2O94983 1202 aa21.05■□□□□ 0.96
CTDSPL-204ENST00000435525 NEXNQ0ZGT2 675 aa21.05■□□□□ 0.96
CTDSPL-204ENST00000435525 AMIGO3Q86WK7 504 aa21.05■□□□□ 0.96
CTDSPL-204ENST00000435525 ZBTB3Q9H5J0 574 aa21.05■□□□□ 0.96
CTDSPL-204ENST00000435525 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
CTDSPL-204ENST00000435525 KSR2Q6VAB6 950 aa21.04■□□□□ 0.96
CTDSPL-204ENST00000435525 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
CTDSPL-204ENST00000435525 API5Q9BZZ5 524 aaKnown RBP21.04■□□□□ 0.96
CTDSPL-204ENST00000435525 GIGYF2Q6Y7W6 1299 aaKnown RBP21.03■□□□□ 0.96
CTDSPL-204ENST00000435525 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
CTDSPL-204ENST00000435525 GYS1P13807 737 aa21.02■□□□□ 0.96
CTDSPL-204ENST00000435525 POLD1P28340 1107 aa21.02■□□□□ 0.96
CTDSPL-204ENST00000435525 G2E3Q7L622 706 aa21.02■□□□□ 0.96
CTDSPL-204ENST00000435525 ARHGAP45Q92619 1136 aa21.02■□□□□ 0.96
CTDSPL-204ENST00000435525 FRAT1Q92837 279 aaPredicted RBP21.02■□□□□ 0.96
CTDSPL-204ENST00000435525 MYH14Q7Z406 1995 aaKnown RBP21.02■□□□□ 0.96
CTDSPL-204ENST00000435525 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 PI4KAP2A4QPH2 592 aa21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 MS4A1P11836 297 aa21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 PI4KAP1Q8N8J0 262 aa21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 SETDB2Q96T68 719 aa21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 NOB1Q9ULX3 412 aaKnown RBP21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 MAP3K2Q9Y2U5 619 aa21.01■□□□□ 0.95
CTDSPL-204ENST00000435525 BCAR3O75815 825 aa21■□□□□ 0.95
CTDSPL-204ENST00000435525 DNAAF4Q8WXU2 420 aa21■□□□□ 0.95
CTDSPL-204ENST00000435525 QSER1Q2KHR3 1735 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 NPHP1O15259 732 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 ZBTB7AO95365 584 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 TCIRG1Q13488 830 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 PARP10Q53GL7 1025 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 ZKSCAN2Q63HK3 967 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 METTL22Q9BUU2 404 aaPredicted RBP20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 PARP3Q9Y6F1 533 aa20.99■□□□□ 0.95
CTDSPL-204ENST00000435525 FKBP8Q14318 412 aa20.98■□□□□ 0.95
CTDSPL-204ENST00000435525 MSL1Q68DK7 614 aa20.98■□□□□ 0.95
CTDSPL-204ENST00000435525 BICDL1Q6ZP65 573 aa20.98■□□□□ 0.95
CTDSPL-204ENST00000435525 SPON1Q9HCB6 807 aa20.98■□□□□ 0.95
CTDSPL-204ENST00000435525 HLFQ16534 295 aa20.97■□□□□ 0.95
CTDSPL-204ENST00000435525 SLC4A10Q6U841 1118 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 PPP1R42Q7Z4L9 355 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 FTSJ3Q8IY81 847 aaKnown RBP20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 MYD88Q99836 296 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 PDGFDQ9GZP0 370 aaPredicted RBP20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 BCL2L12Q9HB09 334 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 ATF5Q9Y2D1 282 aaPredicted RBP20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 CARMIL3Q8ND23 1372 aa20.96■□□□□ 0.95
CTDSPL-204ENST00000435525 ATP10DQ9P241 1426 aa20.95■□□□□ 0.95
CTDSPL-204ENST00000435525 MMP10P09238 476 aa20.95■□□□□ 0.94
CTDSPL-204ENST00000435525 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
CTDSPL-204ENST00000435525 TBC1D9BQ66K14 1250 aa20.95■□□□□ 0.94
CTDSPL-204ENST00000435525 ADCY9O60503 1353 aa20.95■□□□□ 0.94
CTDSPL-204ENST00000435525 GPTP24298 496 aa20.94■□□□□ 0.94
CTDSPL-204ENST00000435525 TRIM28Q13263 835 aaKnown RBP20.94■□□□□ 0.94
CTDSPL-204ENST00000435525 NFIXQ14938 502 aa20.94■□□□□ 0.94
CTDSPL-204ENST00000435525 ZNF34Q8IZ26 560 aa20.94■□□□□ 0.94
CTDSPL-204ENST00000435525 LINS1Q8NG48 757 aa20.94■□□□□ 0.94
CTDSPL-204ENST00000435525 F6X3S4 739 aa20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 TM4SF1P30408 202 aa20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 TPTE2Q6XPS3 522 aa20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 NBPF5PQ86XG9 351 aaPredicted RBP20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 CCDC191Q8NCU4 936 aa20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 SRCIN1Q9C0H9 1055 aa20.93■□□□□ 0.94
CTDSPL-204ENST00000435525 ATP5J2-PTCD1G3V325 749 aa20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 ALDH1L1O75891 902 aa20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 UTP14AQ9BVJ6 771 aaKnown RBP20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 CWC25Q9NXE8 425 aaPredicted RBP20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 TUBGCP6Q96RT7 1819 aa20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 CACNA1FO60840 1977 aa20.92■□□□□ 0.94
CTDSPL-204ENST00000435525 SERPINB2P05120 415 aa20.91■□□□□ 0.94
CTDSPL-204ENST00000435525 C4AP0C0L4 1744 aa20.91■□□□□ 0.94
CTDSPL-204ENST00000435525 SCN7AQ01118 1682 aa20.91■□□□□ 0.94
CTDSPL-204ENST00000435525 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
CTDSPL-204ENST00000435525 DZIP1LQ8IYY4 767 aaKnown RBP20.91■□□□□ 0.94
CTDSPL-204ENST00000435525 TRIM27P14373 513 aa20.9■□□□□ 0.94
CTDSPL-204ENST00000435525 ST5P78524 1137 aa20.9■□□□□ 0.94
CTDSPL-204ENST00000435525 NLRP10Q86W26 655 aa20.9■□□□□ 0.94
CTDSPL-204ENST00000435525 CNBD1Q8NA66 436 aa20.9■□□□□ 0.94
CTDSPL-204ENST00000435525 TRMT112Q9UI30 125 aaKnown RBP20.9■□□□□ 0.94
CTDSPL-204ENST00000435525 FAM177BA6PVY3 158 aa20.89■□□□□ 0.93
CTDSPL-204ENST00000435525 POLRMTO00411 1230 aaKnown RBP20.89■□□□□ 0.93
CTDSPL-204ENST00000435525 BEND3Q5T5X7 828 aa20.89■□□□□ 0.93
CTDSPL-204ENST00000435525 PPP1R1BQ9UD71 204 aaPredicted RBP20.89■□□□□ 0.93
CTDSPL-204ENST00000435525 HDAC5Q9UQL6 1122 aa20.89■□□□□ 0.93
CTDSPL-204ENST00000435525 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
CTDSPL-204ENST00000435525 CASZ1Q86V15 1759 aa20.88■□□□□ 0.93
CTDSPL-204ENST00000435525 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms