RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
NOD1-206ENST00000434755 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
NOD1-206ENST00000434755 RRP12Q5JTH9 1297 aaKnown RBP12.73□□□□□ -0.37
NOD1-206ENST00000434755 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
NOD1-206ENST00000434755 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
NOD1-206ENST00000434755 PHKG2P15735 406 aa12.73□□□□□ -0.37
NOD1-206ENST00000434755 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
NOD1-206ENST00000434755 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
NOD1-206ENST00000434755 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 MX1P20591 662 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 AACSQ86V21 672 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 GPTP24298 496 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
NOD1-206ENST00000434755 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
NOD1-206ENST00000434755 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
NOD1-206ENST00000434755 ITSN1Q15811 1721 aa12.71□□□□□ -0.37
NOD1-206ENST00000434755 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
NOD1-206ENST00000434755 IFIT5Q13325 482 aaKnown RBP12.71□□□□□ -0.37
NOD1-206ENST00000434755 JCADQ9P266 1359 aa12.71□□□□□ -0.37
NOD1-206ENST00000434755 RLBP1P12271 317 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 CCDC34Q96HJ3 373 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.38
NOD1-206ENST00000434755 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.38
NOD1-206ENST00000434755 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.38
NOD1-206ENST00000434755 ATP5J2-PTCD1G3V325 749 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 ATP2B1P20020 1258 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.38
NOD1-206ENST00000434755 ANKRD1Q15327 319 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 NYXQ9GZU5 481 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 OVOS2A0A0J9YW53 1432 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 OVOS2Q6IE36 1432 aa12.71□□□□□ -0.38
NOD1-206ENST00000434755 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
NOD1-206ENST00000434755 ERICH2A1L162 156 aa12.7□□□□□ -0.38
NOD1-206ENST00000434755 ANKRD18BA2A2Z9 1011 aa12.7□□□□□ -0.38
NOD1-206ENST00000434755 C8orf34Q49A92 452 aa12.7□□□□□ -0.38
NOD1-206ENST00000434755 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
NOD1-206ENST00000434755 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
NOD1-206ENST00000434755 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 PES1O00541 588 aaKnown RBP12.69□□□□□ -0.38
NOD1-206ENST00000434755 PDCP20941 246 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 TRIM29Q14134 588 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 RFC4P35249 363 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 ABCC4O15439 1325 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 IFIT1P09914 478 aaKnown RBP12.69□□□□□ -0.38
NOD1-206ENST00000434755 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
NOD1-206ENST00000434755 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 GRM8O00222 908 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 MBD3O95983 291 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 KRT32Q14532 448 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
NOD1-206ENST00000434755 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
NOD1-206ENST00000434755 USP19O94966 1318 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 RTCBQ9Y3I0 505 aaKnown RBP12.68□□□□□ -0.38
NOD1-206ENST00000434755 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 BICD2Q8TD16 824 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
NOD1-206ENST00000434755 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
NOD1-206ENST00000434755 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
NOD1-206ENST00000434755 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
NOD1-206ENST00000434755 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
NOD1-206ENST00000434755 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
NOD1-206ENST00000434755 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
NOD1-206ENST00000434755 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
NOD1-206ENST00000434755 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 SNX21Q969T3 373 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 CCDC152Q4G0S7 254 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 AOX1Q06278 1338 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
NOD1-206ENST00000434755 CCDC8Q9H0W5 538 aaPredicted RBP12.66□□□□□ -0.38
NOD1-206ENST00000434755 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 EPB41L2O43491 1005 aaKnown RBP12.66□□□□□ -0.38
NOD1-206ENST00000434755 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
NOD1-206ENST00000434755 STK3Q13188 491 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
NOD1-206ENST00000434755 ST5P78524 1137 aa12.65□□□□□ -0.38
NOD1-206ENST00000434755 CEP85Q6P2H3 762 aa12.65□□□□□ -0.38
NOD1-206ENST00000434755 ANAPC15P60006 121 aa12.65□□□□□ -0.38
NOD1-206ENST00000434755 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
NOD1-206ENST00000434755 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
NOD1-206ENST00000434755 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
NOD1-206ENST00000434755 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
NOD1-206ENST00000434755 SLC5A1P13866 664 aa12.65□□□□□ -0.39
NOD1-206ENST00000434755 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.39
NOD1-206ENST00000434755 SETDB2Q96T68 719 aa12.65□□□□□ -0.39
NOD1-206ENST00000434755 LGR6Q9HBX8 967 aa12.65□□□□□ -0.39
NOD1-206ENST00000434755 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 BECN2A8MW95 431 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
NOD1-206ENST00000434755 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 CHAF1AQ13111 956 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms