RNA–Protein interactions for RNA: ENST00000434473.1

NAB1-208, Transcript of NGFI-A binding protein 1, human

TSL 2

Gene NAB1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAB1-208	ENST00000434473	TBC1D32	Q96NH3	1257 aa		11.2	□□□□□ -0.62
NAB1-208	ENST00000434473	TMOD3	Q9NYL9	352 aa		11.2	□□□□□ -0.62
NAB1-208	ENST00000434473	NOP58	Q9Y2X3	529 aa	Known RBP	11.2	□□□□□ -0.62
NAB1-208	ENST00000434473	RAB11FIP3	O75154	756 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	TTC22	Q5TAA0	569 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	PLBD2	Q8NHP8	589 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	PIGB	Q92521	554 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	USP35	Q9P2H5	1018 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	RREB1	Q92766	1687 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	ANKRD36C	Q5JPF3	1778 aa		11.19	□□□□□ -0.62
NAB1-208	ENST00000434473	NEURL1B	A8MQ27	555 aa		11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	EXOC5	O00471	708 aa		11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	GSPT1	P15170	499 aa	Known RBP	11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	CWF19L2	Q2TBE0	894 aa	Known RBP	11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	NPM2	Q86SE8	214 aa	Known RBP	11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	KAZALD1	Q96I82	304 aa		11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	LRRCC1	Q9C099	1032 aa		11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	STAP2	Q9UGK3	403 aa		11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	JCAD	Q9P266	1359 aa		11.18	□□□□□ -0.62
NAB1-208	ENST00000434473	MYL6B	P14649	208 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	GCKR	Q14397	625 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	RIC3	Q7Z5B4	369 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	ATG3	Q9NT62	314 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	EXOC6B	Q9Y2D4	811 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	SMARCA5	O60264	1052 aa	Predicted RBP	11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	ADAMTS2	O95450	1211 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	NEXN	Q0ZGT2	675 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	AIMP1	Q12904	312 aa	Known RBP	11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	BCL9L	Q86UU0	1499 aa		11.17	□□□□□ -0.62
NAB1-208	ENST00000434473	AOX1	Q06278	1338 aa		11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	NUP98	P52948	1817 aa		11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	SRGAP3	O43295	1099 aa		11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	PDE1A	P54750	535 aa		11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	HSP90AB4P	Q58FF6	505 aa		11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	UPF2	Q9HAU5	1272 aa	Known RBP	11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	ASAP1	Q9ULH1	1129 aa		11.16	□□□□□ -0.62
NAB1-208	ENST00000434473	EIF5B	O60841	1220 aa	Known RBP	11.15	□□□□□ -0.62
NAB1-208	ENST00000434473	PRKCSH	P14314	528 aa	Predicted RBP	11.15	□□□□□ -0.62
NAB1-208	ENST00000434473	TBC1D9	Q6ZT07	1266 aa		11.15	□□□□□ -0.62
NAB1-208	ENST00000434473	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.15	□□□□□ -0.62
NAB1-208	ENST00000434473	USP42	Q9H9J4	1324 aa	Known RBP	11.15	□□□□□ -0.62
NAB1-208	ENST00000434473	THSD7A	Q9UPZ6	1657 aa		11.15	□□□□□ -0.62
NAB1-208	ENST00000434473	COL5A3	P25940	1745 aa	Predicted RBP	11.15	□□□□□ -0.63
NAB1-208	ENST00000434473	PTCD1	O75127	700 aa	Known RBP	11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	CDC45	O75419	566 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	A1BG	P04217	495 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	RBM25	P49756	843 aa	Known RBP	11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	CASP7	P55210	303 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	RABL6	Q3YEC7	729 aa	Predicted RBP	11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	UNC5CL	Q8IV45	518 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	SUCLG2	Q96I99	432 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	SPATA31A6	Q5VVP1	1343 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	DSG3	P32926	999 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	DDB1	Q16531	1140 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	RHPN1	Q8TCX5	695 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	KIF1BP	Q96EK5	621 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	SLC4A9	Q96Q91	983 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	MYD88	Q99836	296 aa		11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	MYH14	Q7Z406	1995 aa	Known RBP	11.14	□□□□□ -0.63
NAB1-208	ENST00000434473	MYH3	P11055	1940 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473		H7C1W4	665 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	SURF6	O75683	361 aa	Known RBP	11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	SDS	P20132	328 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	MX1	P20591	662 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	PIP4K2A	P48426	406 aa	Predicted RBP	11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	TRIM28	Q13263	835 aa	Known RBP	11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	VPS72	Q15906	364 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	TTLL7	Q6ZT98	887 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	C22orf23	Q9BZE7	217 aa		11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	BICC1	Q9H694	974 aa	Known RBP	11.13	□□□□□ -0.63
NAB1-208	ENST00000434473	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.12	□□□□□ -0.63
NAB1-208	ENST00000434473	NUTM2E	B1AL46	878 aa	Predicted RBP	11.12	□□□□□ -0.63
NAB1-208	ENST00000434473	STARD3NL	O95772	234 aa		11.12	□□□□□ -0.63
NAB1-208	ENST00000434473	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.12	□□□□□ -0.63
NAB1-208	ENST00000434473	DNAJC10	Q8IXB1	793 aa		11.12	□□□□□ -0.63
NAB1-208	ENST00000434473	MARCH10	Q8NA82	808 aa	Predicted RBP	11.12	□□□□□ -0.63
NAB1-208	ENST00000434473	APBB1	O00213	710 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	CYP19A1	P11511	503 aa	Predicted RBP	11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	ZNF772	Q68DY9	489 aa	Predicted RBP	11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	ERC1	Q8IUD2	1116 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	CCDC191	Q8NCU4	936 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	ARX	Q96QS3	562 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	ISCA1	Q9BUE6	129 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	RXRB	P28702	533 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	RFX5	P48382	616 aa	Predicted RBP	11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	PRIM1	P49642	420 aa	Known RBP	11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	EPHA10	Q5JZY3	1008 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	COPRS	Q9NQ92	184 aa		11.11	□□□□□ -0.63
NAB1-208	ENST00000434473	SBF2	Q86WG5	1849 aa		11.1	□□□□□ -0.63
NAB1-208	ENST00000434473	MFAP1	P55081	439 aa	Known RBP	11.1	□□□□□ -0.63
NAB1-208	ENST00000434473	CWC25	Q9NXE8	425 aa	Predicted RBP	11.1	□□□□□ -0.63
NAB1-208	ENST00000434473		A0A087WZG4	1122 aa		11.09	□□□□□ -0.63
NAB1-208	ENST00000434473	TCIRG1	Q13488	830 aa		11.09	□□□□□ -0.63
NAB1-208	ENST00000434473	UBE3B	Q7Z3V4	1068 aa		11.09	□□□□□ -0.63
NAB1-208	ENST00000434473	PI4K2B	Q8TCG2	481 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms