RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
TMCO3-202ENST00000434316 TNRQ92752 1358 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 PTPRUQ92729 1446 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 NLRP6P59044 892 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 PRDM10Q9NQV6 1147 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 PRDM4Q9UKN5 801 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 VPS37CA5D8V6 355 aaPredicted RBP17.89■□□□□ 0.45
TMCO3-202ENST00000434316 HOXC9P31274 260 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 PRIMPOLQ96LW4 560 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 DIAPH3Q9NSV4 1193 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 SPC24Q8NBT2 197 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 KCNF1Q9H3M0 494 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 SPTLC3Q9NUV7 552 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 PYCARDQ9ULZ3 195 aa17.89■□□□□ 0.45
TMCO3-202ENST00000434316 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
TMCO3-202ENST00000434316 OS9Q13438 667 aaPredicted RBP17.88■□□□□ 0.45
TMCO3-202ENST00000434316 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
TMCO3-202ENST00000434316 CHPF2Q9P2E5 772 aa17.88■□□□□ 0.45
TMCO3-202ENST00000434316 ATP6V1DQ9Y5K8 247 aa17.88■□□□□ 0.45
TMCO3-202ENST00000434316 COL9A3Q14050 684 aaPredicted RBP17.88■□□□□ 0.45
TMCO3-202ENST00000434316 BEND3Q5T5X7 828 aa17.87■□□□□ 0.45
TMCO3-202ENST00000434316 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
TMCO3-202ENST00000434316 HMGN5P82970 282 aaKnown RBP17.87■□□□□ 0.45
TMCO3-202ENST00000434316 NWD1Q149M9 1564 aa17.87■□□□□ 0.45
TMCO3-202ENST00000434316 ME3Q16798 604 aa17.87■□□□□ 0.45
TMCO3-202ENST00000434316 CCDC94Q9BW85 323 aaPredicted RBP17.87■□□□□ 0.45
TMCO3-202ENST00000434316 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
TMCO3-202ENST00000434316 PIK3C2AO00443 1686 aa17.86■□□□□ 0.45
TMCO3-202ENST00000434316 KCNQ3O43525 872 aa17.86■□□□□ 0.45
TMCO3-202ENST00000434316 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
TMCO3-202ENST00000434316 GLRX3O76003 335 aaKnown RBP17.86■□□□□ 0.45
TMCO3-202ENST00000434316 FAM173BQ6P4H8 233 aa17.86■□□□□ 0.45
TMCO3-202ENST00000434316 UBR1Q8IWV7 1749 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 VPS53Q5VIR6 699 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 DIP2BQ9P265 1576 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 GTF2F1P35269 517 aaKnown RBP eCLIP17.85■□□□□ 0.45
TMCO3-202ENST00000434316 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 ZSWIM6Q9HCJ5 1215 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 PA2G4Q9UQ80 394 aaKnown RBP17.85■□□□□ 0.45
TMCO3-202ENST00000434316 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 KIAA1524Q8TCG1 905 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 LGR6Q9HBX8 967 aa17.85■□□□□ 0.45
TMCO3-202ENST00000434316 USP42Q9H9J4 1324 aaKnown RBP17.84■□□□□ 0.45
TMCO3-202ENST00000434316 TTC6Q86TZ1 520 aa17.84■□□□□ 0.45
TMCO3-202ENST00000434316 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
TMCO3-202ENST00000434316 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
TMCO3-202ENST00000434316 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
TMCO3-202ENST00000434316 BABAM1Q9NWV8 329 aa17.84■□□□□ 0.45
TMCO3-202ENST00000434316 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
TMCO3-202ENST00000434316 CAMK4Q16566 473 aa17.83■□□□□ 0.45
TMCO3-202ENST00000434316 RUFY2Q8WXA3 655 aa17.83■□□□□ 0.45
TMCO3-202ENST00000434316 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.45
TMCO3-202ENST00000434316 KIF3AQ9Y496 699 aa17.83■□□□□ 0.45
TMCO3-202ENST00000434316 LIG1P18858 919 aa17.83■□□□□ 0.44
TMCO3-202ENST00000434316 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
TMCO3-202ENST00000434316 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
TMCO3-202ENST00000434316 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.44
TMCO3-202ENST00000434316 TCEANC2Q96MN5 208 aa17.83■□□□□ 0.44
TMCO3-202ENST00000434316 BCL2L12Q9HB09 334 aa17.83■□□□□ 0.44
TMCO3-202ENST00000434316 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.44
TMCO3-202ENST00000434316 PLEKHG1Q9ULL1 1385 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 NECTIN1Q15223 517 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 HSP90AB4PQ58FF6 505 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 ECHDC1Q9NTX5 307 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 CCDC192P0DO97 292 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 RBM8AQ9Y5S9 174 aaKnown RBP17.82■□□□□ 0.44
TMCO3-202ENST00000434316 ADCY9O60503 1353 aa17.82■□□□□ 0.44
TMCO3-202ENST00000434316 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
TMCO3-202ENST00000434316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.81■□□□□ 0.44
TMCO3-202ENST00000434316 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
TMCO3-202ENST00000434316 CREB3L3Q68CJ9 461 aa17.81■□□□□ 0.44
TMCO3-202ENST00000434316 KCNB2Q92953 911 aa17.81■□□□□ 0.44
TMCO3-202ENST00000434316 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
TMCO3-202ENST00000434316 LUZP1Q86V48 1076 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 RIOK3O14730 519 aaKnown RBP17.8■□□□□ 0.44
TMCO3-202ENST00000434316 IFIT2P09913 472 aaKnown RBP17.8■□□□□ 0.44
TMCO3-202ENST00000434316 PTGS1P23219 599 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 KCNJ4P48050 445 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 CKAP2LQ8IYA6 745 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 MRVI1Q9Y6F6 885 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 AACSQ86V21 672 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
TMCO3-202ENST00000434316 CBX1P83916 185 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 TYRO3Q06418 890 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
TMCO3-202ENST00000434316 PPP4R3BQ5MIZ7 849 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 ABTB2Q8N961 1025 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 NUP62CLQ9H1M0 184 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 DIP2AQ14689 1571 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
TMCO3-202ENST00000434316 ZKSCAN1P17029 563 aaPredicted RBP17.78■□□□□ 0.44
TMCO3-202ENST00000434316 KRT85P78386 507 aa17.78■□□□□ 0.44
TMCO3-202ENST00000434316 MAP3K11Q16584 847 aa17.78■□□□□ 0.44
TMCO3-202ENST00000434316 ATP2B3Q16720 1220 aa17.78■□□□□ 0.44
TMCO3-202ENST00000434316 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
TMCO3-202ENST00000434316 FAM200AQ8TCP9 573 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms