RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 NBPF14Q5TI25 921 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 NBPF10Q6P3W6 841 aaKnown RBP24.11■■□□□ 1.45
VRK2-205ENST00000432057 NBPF15Q8N660 670 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 RHPN1Q8TCX5 695 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 KAZALD1Q96I82 304 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 TBC1D2Q9BYX2 928 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 HDAC5Q9UQL6 1122 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 UBAP1LF5GYI3 381 aa24.1■■□□□ 1.45
VRK2-205ENST00000432057 PIP4K2BP78356 416 aa24.09■■□□□ 1.45
VRK2-205ENST00000432057 GCKRQ14397 625 aa24.09■■□□□ 1.45
VRK2-205ENST00000432057 KIF1BPQ96EK5 621 aa24.09■■□□□ 1.45
VRK2-205ENST00000432057 BICC1Q9H694 974 aaKnown RBP24.09■■□□□ 1.45
VRK2-205ENST00000432057 STAP2Q9UGK3 403 aa24.09■■□□□ 1.45
VRK2-205ENST00000432057 NWD2Q9ULI1 1742 aa24.08■■□□□ 1.45
VRK2-205ENST00000432057 ADAMTS2O95450 1211 aa24.08■■□□□ 1.45
VRK2-205ENST00000432057 NUTM1Q86Y26 1132 aa24.07■■□□□ 1.44
VRK2-205ENST00000432057 A1BGP04217 495 aa24.07■■□□□ 1.44
VRK2-205ENST00000432057 HSP90AB4PQ58FF6 505 aa24.07■■□□□ 1.44
VRK2-205ENST00000432057 OS9Q13438 667 aaPredicted RBP24.06■■□□□ 1.44
VRK2-205ENST00000432057 CASC1Q6TDU7 716 aa24.06■■□□□ 1.44
VRK2-205ENST00000432057 PLBD2Q8NHP8 589 aa24.06■■□□□ 1.44
VRK2-205ENST00000432057 PA2G4Q9UQ80 394 aaKnown RBP24.06■■□□□ 1.44
VRK2-205ENST00000432057 AOX1Q06278 1338 aa24.05■■□□□ 1.44
VRK2-205ENST00000432057 PIGBQ92521 554 aa24.05■■□□□ 1.44
VRK2-205ENST00000432057 TTLL7Q6ZT98 887 aa24.04■■□□□ 1.44
VRK2-205ENST00000432057 CERKQ8TCT0 537 aa24.04■■□□□ 1.44
VRK2-205ENST00000432057 KIF2CQ99661 725 aa24.04■■□□□ 1.44
VRK2-205ENST00000432057 ASAP1Q9ULH1 1129 aa24.04■■□□□ 1.44
VRK2-205ENST00000432057 ATP5J2-PTCD1G3V325 749 aa24.03■■□□□ 1.44
VRK2-205ENST00000432057 EIF5BO60841 1220 aaKnown RBP24.03■■□□□ 1.44
VRK2-205ENST00000432057 JARID2Q92833 1246 aaPredicted RBP24.02■■□□□ 1.44
VRK2-205ENST00000432057 EPHA10Q5JZY3 1008 aa24.02■■□□□ 1.44
VRK2-205ENST00000432057 BCL9O00512 1426 aa24.01■■□□□ 1.43
VRK2-205ENST00000432057 NUTM2BA6NNL0 878 aaPredicted RBP24.01■■□□□ 1.43
VRK2-205ENST00000432057 NUTM2EB1AL46 878 aaPredicted RBP24.01■■□□□ 1.43
VRK2-205ENST00000432057 NUTM2AQ8IVF1 878 aaPredicted RBP24.01■■□□□ 1.43
VRK2-205ENST00000432057 ATG3Q9NT62 314 aa24.01■■□□□ 1.43
VRK2-205ENST00000432057 TRIM6-TRIM34B2RNG4 842 aa24■■□□□ 1.43
VRK2-205ENST00000432057 EXOC5O00471 708 aa24■■□□□ 1.43
VRK2-205ENST00000432057 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
VRK2-205ENST00000432057 RILPL2Q969X0 211 aa24■■□□□ 1.43
VRK2-205ENST00000432057 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
VRK2-205ENST00000432057 ERC1Q8IUD2 1116 aa23.99■■□□□ 1.43
VRK2-205ENST00000432057 UNC5CLQ8IV45 518 aa23.99■■□□□ 1.43
VRK2-205ENST00000432057 PI4K2BQ8TCG2 481 aa23.99■■□□□ 1.43
VRK2-205ENST00000432057 USP26Q9BXU7 913 aa23.99■■□□□ 1.43
VRK2-205ENST00000432057 SPATA31A1Q5TZJ5 1347 aa23.99■■□□□ 1.43
VRK2-205ENST00000432057 HSCBQ8IWL3 235 aa23.98■■□□□ 1.43
VRK2-205ENST00000432057 DNAJC10Q8IXB1 793 aa23.98■■□□□ 1.43
VRK2-205ENST00000432057 COL15A1P39059 1388 aa23.98■■□□□ 1.43
VRK2-205ENST00000432057 A0A087WZG4 1122 aa23.98■■□□□ 1.43
VRK2-205ENST00000432057 ERC2O15083 957 aa23.98■■□□□ 1.43
VRK2-205ENST00000432057 ZBTB3Q9H5J0 574 aa23.98■■□□□ 1.43
VRK2-205ENST00000432057 RBM42Q9BTD8 480 aaKnown RBP23.97■■□□□ 1.43
VRK2-205ENST00000432057 VSIG10Q8N0Z9 540 aa23.96■■□□□ 1.43
VRK2-205ENST00000432057 CLASRPQ8N2M8 674 aaKnown RBP23.96■■□□□ 1.43
VRK2-205ENST00000432057 USP42Q9H9J4 1324 aaKnown RBP23.96■■□□□ 1.43
VRK2-205ENST00000432057 ANKRD36CQ5JPF3 1778 aa23.96■■□□□ 1.43
VRK2-205ENST00000432057 SLIT2O94813 1529 aa23.96■■□□□ 1.43
VRK2-205ENST00000432057 CASP7P55210 303 aa23.96■■□□□ 1.43
VRK2-205ENST00000432057 KLHDC4Q8TBB5 520 aa23.96■■□□□ 1.43
VRK2-205ENST00000432057 SNX21Q969T3 373 aa23.96■■□□□ 1.43
VRK2-205ENST00000432057 SASH1O94885 1247 aa23.95■■□□□ 1.42
VRK2-205ENST00000432057 REC8O95072 547 aa23.95■■□□□ 1.42
VRK2-205ENST00000432057 MAP4K4O95819 1239 aaPredicted RBP23.95■■□□□ 1.42
VRK2-205ENST00000432057 G3BP1Q13283 466 aaKnown RBP eCLIP23.95■■□□□ 1.42
VRK2-205ENST00000432057 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.42
VRK2-205ENST00000432057 SPRYD3Q8NCJ5 442 aa23.95■■□□□ 1.42
VRK2-205ENST00000432057 SIL1Q9H173 461 aa23.95■■□□□ 1.42
VRK2-205ENST00000432057 CHMLP26374 656 aa23.94■■□□□ 1.42
VRK2-205ENST00000432057 SYTL4Q96C24 671 aaPredicted RBP23.94■■□□□ 1.42
VRK2-205ENST00000432057 ESYT1Q9BSJ8 1104 aa23.94■■□□□ 1.42
VRK2-205ENST00000432057 CDCA7Q9BWT1 371 aaPredicted RBP23.94■■□□□ 1.42
VRK2-205ENST00000432057 TEX13AQ9BXU3 409 aaPredicted RBP23.94■■□□□ 1.42
VRK2-205ENST00000432057 ANTXR1Q9H6X2 564 aa23.94■■□□□ 1.42
VRK2-205ENST00000432057 THRAP3Q9Y2W1 955 aaKnown RBP23.94■■□□□ 1.42
VRK2-205ENST00000432057 ZNF330Q9Y3S2 320 aaPredicted RBP23.94■■□□□ 1.42
VRK2-205ENST00000432057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.94■■□□□ 1.42
VRK2-205ENST00000432057 RABL6Q3YEC7 729 aaPredicted RBP23.93■■□□□ 1.42
VRK2-205ENST00000432057 TTC41PQ6P2S7 1318 aa23.93■■□□□ 1.42
VRK2-205ENST00000432057 CWC25Q9NXE8 425 aaPredicted RBP23.93■■□□□ 1.42
VRK2-205ENST00000432057 SPATA31A5Q5VU36 1347 aa23.92■■□□□ 1.42
VRK2-205ENST00000432057 SPATA31A7Q8IWB4 1347 aa23.92■■□□□ 1.42
VRK2-205ENST00000432057 RFX5P48382 616 aaPredicted RBP23.92■■□□□ 1.42
VRK2-205ENST00000432057 NFKBIBQ15653 356 aa23.92■■□□□ 1.42
VRK2-205ENST00000432057 DDB1Q16531 1140 aa23.92■■□□□ 1.42
VRK2-205ENST00000432057 AACSQ86V21 672 aa23.92■■□□□ 1.42
VRK2-205ENST00000432057 SLC4A9Q96Q91 983 aa23.92■■□□□ 1.42
VRK2-205ENST00000432057 H7C1W4 665 aa23.91■■□□□ 1.42
VRK2-205ENST00000432057 CD2BP2O95400 341 aaKnown RBP23.91■■□□□ 1.42
VRK2-205ENST00000432057 IFIT2P09913 472 aaKnown RBP23.91■■□□□ 1.42
VRK2-205ENST00000432057 NUP98P52948 1817 aa23.91■■□□□ 1.42
VRK2-205ENST00000432057 STARD3NLO95772 234 aa23.9■■□□□ 1.42
VRK2-205ENST00000432057 PRIM1P49642 420 aaKnown RBP23.9■■□□□ 1.42
VRK2-205ENST00000432057 COPRSQ9NQ92 184 aa23.9■■□□□ 1.42
VRK2-205ENST00000432057 GLRX3O76003 335 aaKnown RBP23.89■■□□□ 1.41
VRK2-205ENST00000432057 ECHDC1Q9NTX5 307 aa23.89■■□□□ 1.41
VRK2-205ENST00000432057 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
VRK2-205ENST00000432057 PTPN12Q05209 780 aaKnown RBP23.88■■□□□ 1.41
VRK2-205ENST00000432057 CNTROBQ8N137 903 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms