RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
CSTF3-202ENST00000431742 MSL1Q68DK7 614 aa18.52■□□□□ 0.56
CSTF3-202ENST00000431742 TTLL7Q6ZT98 887 aa18.52■□□□□ 0.56
CSTF3-202ENST00000431742 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.56
CSTF3-202ENST00000431742 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
CSTF3-202ENST00000431742 MAP3K15Q6ZN16 1313 aa18.51■□□□□ 0.55
CSTF3-202ENST00000431742 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
CSTF3-202ENST00000431742 FKBP8Q14318 412 aa18.51■□□□□ 0.55
CSTF3-202ENST00000431742 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
CSTF3-202ENST00000431742 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
CSTF3-202ENST00000431742 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
CSTF3-202ENST00000431742 ERVV-1B6SEH8 477 aa18.5■□□□□ 0.55
CSTF3-202ENST00000431742 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
CSTF3-202ENST00000431742 ZNF428Q96B54 188 aa18.5■□□□□ 0.55
CSTF3-202ENST00000431742 STK31Q9BXU1 1019 aa18.5■□□□□ 0.55
CSTF3-202ENST00000431742 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
CSTF3-202ENST00000431742 ATP10DQ9P241 1426 aa18.49■□□□□ 0.55
CSTF3-202ENST00000431742 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
CSTF3-202ENST00000431742 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
CSTF3-202ENST00000431742 KIF6Q6ZMV9 814 aa18.49■□□□□ 0.55
CSTF3-202ENST00000431742 TM4SF1P30408 202 aa18.48■□□□□ 0.55
CSTF3-202ENST00000431742 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
CSTF3-202ENST00000431742 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
CSTF3-202ENST00000431742 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
CSTF3-202ENST00000431742 HLFQ16534 295 aa18.47■□□□□ 0.55
CSTF3-202ENST00000431742 ARXQ96QS3 562 aa18.47■□□□□ 0.55
CSTF3-202ENST00000431742 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
CSTF3-202ENST00000431742 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
CSTF3-202ENST00000431742 ANKRD31Q8N7Z5 1873 aa18.47■□□□□ 0.55
CSTF3-202ENST00000431742 MMP10P09238 476 aa18.46■□□□□ 0.55
CSTF3-202ENST00000431742 DDR1Q08345 913 aa18.46■□□□□ 0.55
CSTF3-202ENST00000431742 AIMP1Q12904 312 aaKnown RBP18.46■□□□□ 0.55
CSTF3-202ENST00000431742 NFIXQ14938 502 aa18.46■□□□□ 0.55
CSTF3-202ENST00000431742 G2E3Q7L622 706 aa18.46■□□□□ 0.55
CSTF3-202ENST00000431742 POLD1P28340 1107 aa18.45■□□□□ 0.54
CSTF3-202ENST00000431742 ALDH1L2Q3SY69 923 aa18.45■□□□□ 0.54
CSTF3-202ENST00000431742 TBC1D9BQ66K14 1250 aa18.45■□□□□ 0.54
CSTF3-202ENST00000431742 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
CSTF3-202ENST00000431742 PLBD2Q8NHP8 589 aa18.45■□□□□ 0.54
CSTF3-202ENST00000431742 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
CSTF3-202ENST00000431742 YTHDC1Q96MU7 727 aaKnown RBP18.45■□□□□ 0.54
CSTF3-202ENST00000431742 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
CSTF3-202ENST00000431742 ADCY9O60503 1353 aa18.44■□□□□ 0.54
CSTF3-202ENST00000431742 CARMIL3Q8ND23 1372 aa18.44■□□□□ 0.54
CSTF3-202ENST00000431742 POLRMTO00411 1230 aaKnown RBP18.44■□□□□ 0.54
CSTF3-202ENST00000431742 FLIIQ13045 1269 aa18.44■□□□□ 0.54
CSTF3-202ENST00000431742 ANKRD13DQ6ZTN6 518 aa18.44■□□□□ 0.54
CSTF3-202ENST00000431742 LAMB2P55268 1798 aa18.43■□□□□ 0.54
CSTF3-202ENST00000431742 DLEC1Q9Y238 1755 aa18.43■□□□□ 0.54
CSTF3-202ENST00000431742 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
CSTF3-202ENST00000431742 MRPL50Q8N5N7 158 aaKnown RBP18.43■□□□□ 0.54
CSTF3-202ENST00000431742 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
CSTF3-202ENST00000431742 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
CSTF3-202ENST00000431742 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
CSTF3-202ENST00000431742 DDX58O95786 925 aaKnown RBP18.41■□□□□ 0.54
CSTF3-202ENST00000431742 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
CSTF3-202ENST00000431742 BRPF1P55201 1214 aaPredicted RBP18.41■□□□□ 0.54
CSTF3-202ENST00000431742 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
CSTF3-202ENST00000431742 TNRC6CQ9HCJ0 1690 aaKnown RBP18.41■□□□□ 0.54
CSTF3-202ENST00000431742 COL11A2P13942 1736 aaPredicted RBP18.4■□□□□ 0.54
CSTF3-202ENST00000431742 DDX60Q8IY21 1712 aaKnown RBP18.4■□□□□ 0.54
CSTF3-202ENST00000431742 HSP90AB3PQ58FF7 597 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 SMC4Q9NTJ3 1288 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
CSTF3-202ENST00000431742 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
CSTF3-202ENST00000431742 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
CSTF3-202ENST00000431742 TCIRG1Q13488 830 aa18.39■□□□□ 0.53
CSTF3-202ENST00000431742 RIC3Q7Z5B4 369 aa18.39■□□□□ 0.53
CSTF3-202ENST00000431742 PI4KAP1Q8N8J0 262 aa18.39■□□□□ 0.53
CSTF3-202ENST00000431742 ISCA1Q9BUE6 129 aa18.39■□□□□ 0.53
CSTF3-202ENST00000431742 SERPINB2P05120 415 aa18.38■□□□□ 0.53
CSTF3-202ENST00000431742 FKBP5Q13451 457 aaPredicted RBP18.38■□□□□ 0.53
CSTF3-202ENST00000431742 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
CSTF3-202ENST00000431742 MAP3K2Q9Y2U5 619 aa18.38■□□□□ 0.53
CSTF3-202ENST00000431742 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
CSTF3-202ENST00000431742 GPTP24298 496 aa18.37■□□□□ 0.53
CSTF3-202ENST00000431742 PTPRCP08575 1304 aa18.37■□□□□ 0.53
CSTF3-202ENST00000431742 MYH3P11055 1940 aa18.36■□□□□ 0.53
CSTF3-202ENST00000431742 TRIM28Q13263 835 aaKnown RBP18.36■□□□□ 0.53
CSTF3-202ENST00000431742 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
CSTF3-202ENST00000431742 PARP10Q53GL7 1025 aa18.36■□□□□ 0.53
CSTF3-202ENST00000431742 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
CSTF3-202ENST00000431742 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
CSTF3-202ENST00000431742 PPP1R1BQ9UD71 204 aaPredicted RBP18.36■□□□□ 0.53
CSTF3-202ENST00000431742 NTSR2O95665 410 aa18.35■□□□□ 0.53
CSTF3-202ENST00000431742 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
CSTF3-202ENST00000431742 CD2APQ9Y5K6 639 aa18.35■□□□□ 0.53
CSTF3-202ENST00000431742 RNF123Q5XPI4 1314 aa18.34■□□□□ 0.53
CSTF3-202ENST00000431742 KIF16BQ96L93 1317 aa18.34■□□□□ 0.53
CSTF3-202ENST00000431742 SUSD4Q5VX71 490 aa18.34■□□□□ 0.53
CSTF3-202ENST00000431742 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
CSTF3-202ENST00000431742 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
CSTF3-202ENST00000431742 MYD88Q99836 296 aa18.34■□□□□ 0.53
CSTF3-202ENST00000431742 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
CSTF3-202ENST00000431742 CACNA1SQ13698 1873 aa18.33■□□□□ 0.53
CSTF3-202ENST00000431742 ABCC12Q96J65 1359 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms