RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
CSNK1E-209ENST00000431632 AIMP1Q12904 312 aaKnown RBP18.5■□□□□ 0.55
CSNK1E-209ENST00000431632 KIF6Q6ZMV9 814 aa18.5■□□□□ 0.55
CSNK1E-209ENST00000431632 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
CSNK1E-209ENST00000431632 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
CSNK1E-209ENST00000431632 ZNF652Q9Y2D9 606 aa18.5■□□□□ 0.55
CSNK1E-209ENST00000431632 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
CSNK1E-209ENST00000431632 RGL2O15211 777 aa18.49■□□□□ 0.55
CSNK1E-209ENST00000431632 XAGE3Q8WTP9 111 aa18.49■□□□□ 0.55
CSNK1E-209ENST00000431632 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
CSNK1E-209ENST00000431632 A0A0G2JLW4 131 aa18.48■□□□□ 0.55
CSNK1E-209ENST00000431632 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
CSNK1E-209ENST00000431632 TGFB2P61812 414 aa18.48■□□□□ 0.55
CSNK1E-209ENST00000431632 GOLGA2Q08379 1002 aa18.48■□□□□ 0.55
CSNK1E-209ENST00000431632 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
CSNK1E-209ENST00000431632 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
CSNK1E-209ENST00000431632 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
CSNK1E-209ENST00000431632 C10orf71Q711Q0 1435 aa18.47■□□□□ 0.55
CSNK1E-209ENST00000431632 DPEP1P16444 411 aa18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 GPR162Q16538 588 aa18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 GIGYF2Q6Y7W6 1299 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 SCN7AQ01118 1682 aa18.46■□□□□ 0.55
CSNK1E-209ENST00000431632 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
CSNK1E-209ENST00000431632 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
CSNK1E-209ENST00000431632 VAMP4O75379 141 aa18.45■□□□□ 0.54
CSNK1E-209ENST00000431632 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
CSNK1E-209ENST00000431632 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
CSNK1E-209ENST00000431632 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
CSNK1E-209ENST00000431632 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
CSNK1E-209ENST00000431632 KCNA3P22001 575 aa18.44■□□□□ 0.54
CSNK1E-209ENST00000431632 GPTP24298 496 aa18.44■□□□□ 0.54
CSNK1E-209ENST00000431632 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
CSNK1E-209ENST00000431632 ZNF34Q8IZ26 560 aa18.44■□□□□ 0.54
CSNK1E-209ENST00000431632 PHAXQ9H814 394 aaKnown RBP18.44■□□□□ 0.54
CSNK1E-209ENST00000431632 BCORQ6W2J9 1755 aa18.43■□□□□ 0.54
CSNK1E-209ENST00000431632 YBX3P16989 372 aaKnown RBP eCLIP18.43■□□□□ 0.54
CSNK1E-209ENST00000431632 CHRNA5P30532 468 aa18.43■□□□□ 0.54
CSNK1E-209ENST00000431632 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
CSNK1E-209ENST00000431632 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
CSNK1E-209ENST00000431632 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
CSNK1E-209ENST00000431632 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
CSNK1E-209ENST00000431632 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
CSNK1E-209ENST00000431632 BRIP1Q9BX63 1249 aa18.42■□□□□ 0.54
CSNK1E-209ENST00000431632 GOLGB1Q14789 3259 aaKnown RBP18.42■□□□□ 0.54
CSNK1E-209ENST00000431632 E9PSI1 815 aa18.41■□□□□ 0.54
CSNK1E-209ENST00000431632 NPHP1O15259 732 aa18.41■□□□□ 0.54
CSNK1E-209ENST00000431632 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
CSNK1E-209ENST00000431632 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
CSNK1E-209ENST00000431632 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
CSNK1E-209ENST00000431632 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 KIF13BQ9NQT8 1826 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 SUSD4Q5VX71 490 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 UBN2Q6ZU65 1347 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
CSNK1E-209ENST00000431632 UTRNP46939 3433 aa18.39■□□□□ 0.54
CSNK1E-209ENST00000431632 PDE6BP35913 854 aa18.39■□□□□ 0.53
CSNK1E-209ENST00000431632 ST5P78524 1137 aa18.39■□□□□ 0.53
CSNK1E-209ENST00000431632 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.53
CSNK1E-209ENST00000431632 PIM2Q9P1W9 311 aa18.39■□□□□ 0.53
CSNK1E-209ENST00000431632 NUP98P52948 1817 aa18.39■□□□□ 0.53
CSNK1E-209ENST00000431632 H0YIN7 160 aa18.38■□□□□ 0.53
CSNK1E-209ENST00000431632 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
CSNK1E-209ENST00000431632 HSP90AB3PQ58FF7 597 aa18.38■□□□□ 0.53
CSNK1E-209ENST00000431632 G2E3Q7L622 706 aa18.38■□□□□ 0.53
CSNK1E-209ENST00000431632 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
CSNK1E-209ENST00000431632 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
CSNK1E-209ENST00000431632 GRIN3BO60391 1043 aa18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 ERFEQ4G0M1 354 aa18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 PARP10Q53GL7 1025 aa18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 RIC3Q7Z5B4 369 aa18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 N4BP2Q86UW6 1770 aaPredicted RBP18.37■□□□□ 0.53
CSNK1E-209ENST00000431632 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
CSNK1E-209ENST00000431632 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
CSNK1E-209ENST00000431632 KIAA1551Q9HCM1 1747 aa18.36■□□□□ 0.53
CSNK1E-209ENST00000431632 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 NTSR2O95665 410 aa18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 UTP14AQ9BVJ6 771 aaKnown RBP18.35■□□□□ 0.53
CSNK1E-209ENST00000431632 KLRG2A4D1S0 409 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-209ENST00000431632 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
CSNK1E-209ENST00000431632 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
CSNK1E-209ENST00000431632 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.536e-8■■□□□ 13.4
CSNK1E-209ENST00000431632 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
CSNK1E-209ENST00000431632 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.52
CSNK1E-209ENST00000431632 SRGNP10124 158 aa18.33■□□□□ 0.52
CSNK1E-209ENST00000431632 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.52
CSNK1E-209ENST00000431632 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms