RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PES1O00541 588 aaKnown RBP15.55■□□□□ 0.08
PTCH1-207ENST00000429896 TRIM37O94972 964 aa15.55■□□□□ 0.08
PTCH1-207ENST00000429896 CPLX2Q6PUV4 134 aaKnown RBP15.55■□□□□ 0.08
PTCH1-207ENST00000429896 ANKRD18AQ8IVF6 992 aa15.55■□□□□ 0.08
PTCH1-207ENST00000429896 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
PTCH1-207ENST00000429896 TSPYL6Q8N831 410 aa15.55■□□□□ 0.08
PTCH1-207ENST00000429896 CHD1LQ86WJ1 897 aa15.55■□□□□ 0.08
PTCH1-207ENST00000429896 NACAP1Q9BZK3 213 aa15.54■□□□□ 0.08
PTCH1-207ENST00000429896 VAMP4O75379 141 aa15.54■□□□□ 0.08
PTCH1-207ENST00000429896 TMOD2Q9NZR1 351 aa15.54■□□□□ 0.08
PTCH1-207ENST00000429896 SLIT1O75093 1534 aa15.54■□□□□ 0.08
PTCH1-207ENST00000429896 CHL1O00533 1208 aa15.54■□□□□ 0.08
PTCH1-207ENST00000429896 RBM6P78332 1123 aaKnown RBP15.54■□□□□ 0.08
PTCH1-207ENST00000429896 NUTM1Q86Y26 1132 aa15.53■□□□□ 0.08
PTCH1-207ENST00000429896 L1TD1Q5T7N2 865 aaKnown RBP15.53■□□□□ 0.08
PTCH1-207ENST00000429896 PDE4AP27815 886 aa15.53■□□□□ 0.08
PTCH1-207ENST00000429896 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
PTCH1-207ENST00000429896 MARCH6O60337 910 aa15.53■□□□□ 0.08
PTCH1-207ENST00000429896 MAP4K4O95819 1239 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-207ENST00000429896 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
PTCH1-207ENST00000429896 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-207ENST00000429896 NRXN1Q9ULB1 1477 aa15.53■□□□□ 0.08
PTCH1-207ENST00000429896 LINS1Q8NG48 757 aa15.52■□□□□ 0.08
PTCH1-207ENST00000429896 ZNF496Q96IT1 587 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-207ENST00000429896 GRM8O00222 908 aa15.52■□□□□ 0.08
PTCH1-207ENST00000429896 CNBD1Q8NA66 436 aa15.52■□□□□ 0.08
PTCH1-207ENST00000429896 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
PTCH1-207ENST00000429896 ABCF2Q9UG63 623 aa15.52■□□□□ 0.08
PTCH1-207ENST00000429896 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
PTCH1-207ENST00000429896 DCCP43146 1447 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 KIF13AQ9H1H9 1805 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 IDH1O75874 414 aaKnown RBP15.51■□□□□ 0.07
PTCH1-207ENST00000429896 FAM184AQ8NB25 1140 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 IRS4O14654 1257 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-207ENST00000429896 FAM182BQ5T319 152 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 USP31Q70CQ4 1352 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 A1BGP04217 495 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 IL17REQ8NFR9 667 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 CPS1P31327 1500 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 MYO3AQ8NEV4 1616 aa15.51■□□□□ 0.07
PTCH1-207ENST00000429896 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
PTCH1-207ENST00000429896 RBM17Q96I25 401 aaKnown RBP15.51■□□□□ 0.07
PTCH1-207ENST00000429896 CPLX1O14810 134 aa15.5■□□□□ 0.07
PTCH1-207ENST00000429896 PHAXQ9H814 394 aaKnown RBP15.5■□□□□ 0.07
PTCH1-207ENST00000429896 TECPR2O15040 1411 aa15.5■□□□□ 0.07
PTCH1-207ENST00000429896 CPSF1Q10570 1443 aaKnown RBP15.5■□□□□ 0.07
PTCH1-207ENST00000429896 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-207ENST00000429896 GJD4Q96KN9 370 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-207ENST00000429896 SART3Q15020 963 aaKnown RBP15.5■□□□□ 0.07
PTCH1-207ENST00000429896 C20orf194Q5TEA3 1177 aa15.5■□□□□ 0.07
PTCH1-207ENST00000429896 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-207ENST00000429896 PSMA5P28066 241 aa15.49■□□□□ 0.07
PTCH1-207ENST00000429896 H3BQV1 296 aa15.49■□□□□ 0.07
PTCH1-207ENST00000429896 IFFO2Q5TF58 517 aa15.49■□□□□ 0.07
PTCH1-207ENST00000429896 DZIP1Q86YF9 867 aaKnown RBP15.49■□□□□ 0.07
PTCH1-207ENST00000429896 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
PTCH1-207ENST00000429896 ARHGAP23Q9P227 1491 aa15.49■□□□□ 0.07
PTCH1-207ENST00000429896 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
PTCH1-207ENST00000429896 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
PTCH1-207ENST00000429896 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
PTCH1-207ENST00000429896 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
PTCH1-207ENST00000429896 SIK1P57059 783 aa15.48■□□□□ 0.07
PTCH1-207ENST00000429896 SETD1BQ9UPS6 1966 aaKnown RBP15.48■□□□□ 0.07
PTCH1-207ENST00000429896 MX1P20591 662 aa15.48■□□□□ 0.07
PTCH1-207ENST00000429896 CWF19L2Q2TBE0 894 aaKnown RBP15.48■□□□□ 0.07
PTCH1-207ENST00000429896 TRIM29Q14134 588 aa15.47■□□□□ 0.07
PTCH1-207ENST00000429896 CCDC8Q9H0W5 538 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-207ENST00000429896 MROH2AA6NES4 1674 aa15.47■□□□□ 0.07
PTCH1-207ENST00000429896 CRB1P82279 1406 aa15.47■□□□□ 0.07
PTCH1-207ENST00000429896 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-207ENST00000429896 AIDAQ96BJ3 306 aa15.47■□□□□ 0.07
PTCH1-207ENST00000429896 NEURL4Q96JN8 1562 aa15.47■□□□□ 0.07
PTCH1-207ENST00000429896 RRP12Q5JTH9 1297 aaKnown RBP15.47■□□□□ 0.07
PTCH1-207ENST00000429896 METTL22Q9BUU2 404 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-207ENST00000429896 GLRX3O76003 335 aaKnown RBP15.46■□□□□ 0.07
PTCH1-207ENST00000429896 IKQ13123 557 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-207ENST00000429896 VPS72Q15906 364 aa15.46■□□□□ 0.07
PTCH1-207ENST00000429896 MAP3K12Q12852 859 aa15.46■□□□□ 0.06
PTCH1-207ENST00000429896 MEIS3Q99687 375 aa15.46■□□□□ 0.06
PTCH1-207ENST00000429896 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 SOS2Q07890 1332 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-207ENST00000429896 SLC4A3P48751 1232 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 TPM4P67936 248 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 TDO2P48775 406 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 C3P01024 1663 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 PATL2C9JE40 543 aaKnown RBP15.45■□□□□ 0.06
PTCH1-207ENST00000429896 KCNQ3O43525 872 aa15.45■□□□□ 0.06
PTCH1-207ENST00000429896 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
PTCH1-207ENST00000429896 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
PTCH1-207ENST00000429896 SH3TC1Q8TE82 1336 aa15.44■□□□□ 0.06
PTCH1-207ENST00000429896 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-207ENST00000429896 WWC3Q9ULE0 1092 aa15.44■□□□□ 0.06
PTCH1-207ENST00000429896 KIAA1210Q9ULL0 1709 aa15.44■□□□□ 0.06
PTCH1-207ENST00000429896 ANKRD2Q9GZV1 360 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 USP5P45974 858 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 FOSBP53539 338 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 SPTY2D1Q68D10 685 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms