RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
SNRNP200-202ENST00000429650 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
SNRNP200-202ENST00000429650 GIGYF1O75420 1035 aaPredicted RBP16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 PROSER3Q2NL68 480 aa16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 C1orf141Q5JVX7 400 aa16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
SNRNP200-202ENST00000429650 MSNP26038 577 aaKnown RBP16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 AK2P54819 239 aa16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 ARHGEF25Q86VW2 580 aa16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 C9orf78Q9NZ63 289 aaPredicted RBP16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 GCP02774 474 aa16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
SNRNP200-202ENST00000429650 DIAPH3Q9NSV4 1193 aa16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 ECHDC1Q9NTX5 307 aa16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 SLIT3O75094 1523 aa16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 GADD45BO75293 160 aaPredicted RBP16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 SYAP1Q96A49 352 aaPredicted RBP16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 PA2G4Q9UQ80 394 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 SIPA1L3O60292 1781 aaPredicted RBP16.04■□□□□ 0.16
SNRNP200-202ENST00000429650 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
SNRNP200-202ENST00000429650 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
SNRNP200-202ENST00000429650 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
SNRNP200-202ENST00000429650 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
SNRNP200-202ENST00000429650 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
SNRNP200-202ENST00000429650 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
SNRNP200-202ENST00000429650 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.16
SNRNP200-202ENST00000429650 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
SNRNP200-202ENST00000429650 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
SNRNP200-202ENST00000429650 GPATCH3Q96I76 525 aa16.02■□□□□ 0.16
SNRNP200-202ENST00000429650 IFIT2P09913 472 aaKnown RBP16.02■□□□□ 0.15
SNRNP200-202ENST00000429650 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.15
SNRNP200-202ENST00000429650 PTH1RQ03431 593 aa16.02■□□□□ 0.15
SNRNP200-202ENST00000429650 LARP6Q9BRS8 491 aaKnown RBP16.02■□□□□ 0.15
SNRNP200-202ENST00000429650 TSPY26PQ9H489 355 aa16.02■□□□□ 0.15
SNRNP200-202ENST00000429650 HDAC5Q9UQL6 1122 aa16.02■□□□□ 0.15
SNRNP200-202ENST00000429650 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 CPA1P15085 419 aa16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 RNF214Q8ND24 703 aa16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 ZNF142P52746 1687 aaPredicted RBP16.01■□□□□ 0.15
SNRNP200-202ENST00000429650 SYT1P21579 422 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 LINS1Q8NG48 757 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 GRM8O00222 908 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 STX6O43752 255 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 OFD1O75665 1012 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 PHF14O94880 888 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 LARGE1O95461 756 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 AACSQ86V21 672 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 KCNB2Q92953 911 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 EVI5LQ96CN4 794 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 KAZALD1Q96I82 304 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 SUCLG2Q96I99 432 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 UTYO14607 1347 aa16■□□□□ 0.15
SNRNP200-202ENST00000429650 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 ADCK5Q3MIX3 580 aa15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
SNRNP200-202ENST00000429650 ZNF500O60304 480 aaPredicted RBP15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 SASH1O94885 1247 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 VPS53Q5VIR6 699 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 TM6SF1Q9BZW5 370 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 DDX21Q9NR30 783 aaKnown RBP eCLIP15.98■□□□□ 0.159e-7■□□□□ 10.3
SNRNP200-202ENST00000429650 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 LMOD2Q6P5Q4 547 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 ZSWIM6Q9HCJ5 1215 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 PDRG1Q9NUG6 133 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 F13A1P00488 732 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 ZKSCAN5Q9Y2L8 839 aa15.98■□□□□ 0.15
SNRNP200-202ENST00000429650 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 PDIA6Q15084 440 aa15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 EAF2Q96CJ1 260 aaPredicted RBP15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 RGPD5Q99666 1765 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms