RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 USP44Q9H0E7 712 aa21.07■□□□□ 0.96
ABCF3-203ENST00000429586 CEP85Q6P2H3 762 aa21.07■□□□□ 0.96
ABCF3-203ENST00000429586 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
ABCF3-203ENST00000429586 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
ABCF3-203ENST00000429586 SMC5Q8IY18 1101 aa21.06■□□□□ 0.96
ABCF3-203ENST00000429586 RIC3Q7Z5B4 369 aa21.06■□□□□ 0.96
ABCF3-203ENST00000429586 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
ABCF3-203ENST00000429586 FSD2A1L4K1 749 aa21.05■□□□□ 0.96
ABCF3-203ENST00000429586 FAM182BQ5T319 152 aa21.05■□□□□ 0.96
ABCF3-203ENST00000429586 DDX58O95786 925 aaKnown RBP21.04■□□□□ 0.96
ABCF3-203ENST00000429586 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
ABCF3-203ENST00000429586 SLC4A9Q96Q91 983 aa21.04■□□□□ 0.96
ABCF3-203ENST00000429586 LRRFIP2Q9Y608 721 aaKnown RBP21.04■□□□□ 0.96
ABCF3-203ENST00000429586 KCNQ2O43526 872 aa21.04■□□□□ 0.96
ABCF3-203ENST00000429586 GNAI2P04899 355 aa21.04■□□□□ 0.96
ABCF3-203ENST00000429586 NBPF7P0C2Y1 421 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-203ENST00000429586 GNAI3P08754 354 aa21.03■□□□□ 0.96
ABCF3-203ENST00000429586 ZNF330Q9Y3S2 320 aaPredicted RBP21.03■□□□□ 0.96
ABCF3-203ENST00000429586 GOLGA6L3A6NEY3 463 aa21.03■□□□□ 0.96
ABCF3-203ENST00000429586 UBTFL1P0CB47 393 aaPredicted RBP21.03■□□□□ 0.96
ABCF3-203ENST00000429586 ARFGEF2Q9Y6D5 1785 aa21.02■□□□□ 0.96
ABCF3-203ENST00000429586 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
ABCF3-203ENST00000429586 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
ABCF3-203ENST00000429586 GJD4Q96KN9 370 aaPredicted RBP21.01■□□□□ 0.95
ABCF3-203ENST00000429586 TTLL7Q6ZT98 887 aa21.01■□□□□ 0.95
ABCF3-203ENST00000429586 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
ABCF3-203ENST00000429586 APBB1O00213 710 aa21■□□□□ 0.95
ABCF3-203ENST00000429586 ANKRD45Q5TZF3 282 aa21■□□□□ 0.95
ABCF3-203ENST00000429586 MYD88Q99836 296 aa21■□□□□ 0.95
ABCF3-203ENST00000429586 EP400Q96L91 3159 aa21■□□□□ 0.95
ABCF3-203ENST00000429586 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
ABCF3-203ENST00000429586 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
ABCF3-203ENST00000429586 PNMA6EA0A0J9YXQ4 647 aa20.99■□□□□ 0.95
ABCF3-203ENST00000429586 IGKV5-2P06315 115 aa20.99■□□□□ 0.95
ABCF3-203ENST00000429586 NUCB1Q02818 461 aa20.99■□□□□ 0.95
ABCF3-203ENST00000429586 PTF1AQ7RTS3 328 aa20.99■□□□□ 0.95
ABCF3-203ENST00000429586 BECN1Q14457 450 aa20.98■□□□□ 0.95
ABCF3-203ENST00000429586 LINS1Q8NG48 757 aa20.98■□□□□ 0.95
ABCF3-203ENST00000429586 GCC1Q96CN9 775 aa20.98■□□□□ 0.95
ABCF3-203ENST00000429586 C9orf78Q9NZ63 289 aaPredicted RBP20.98■□□□□ 0.95
ABCF3-203ENST00000429586 TJP1Q07157 1748 aa20.98■□□□□ 0.95
ABCF3-203ENST00000429586 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
ABCF3-203ENST00000429586 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
ABCF3-203ENST00000429586 ATP5J2-PTCD1G3V325 749 aa20.97■□□□□ 0.95
ABCF3-203ENST00000429586 CHD1LQ86WJ1 897 aa20.97■□□□□ 0.95
ABCF3-203ENST00000429586 PDCL3Q9H2J4 239 aa20.97■□□□□ 0.95
ABCF3-203ENST00000429586 METTL22Q9BUU2 404 aaPredicted RBP20.96■□□□□ 0.95
ABCF3-203ENST00000429586 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 A0A0U1RQG5 324 aaPredicted RBP20.96■□□□□ 0.95
ABCF3-203ENST00000429586 ALDH1L1O75891 902 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 TPM2P07951 284 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 FGD1P98174 961 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 JARID2Q92833 1246 aaPredicted RBP20.96■□□□□ 0.95
ABCF3-203ENST00000429586 ARXQ96QS3 562 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 TRPC5Q9UL62 973 aaPredicted RBP20.96■□□□□ 0.95
ABCF3-203ENST00000429586 ATRNO75882 1429 aa20.96■□□□□ 0.95
ABCF3-203ENST00000429586 STARD3NLO95772 234 aa20.95■□□□□ 0.94
ABCF3-203ENST00000429586 PANK2Q9BZ23 570 aa20.95■□□□□ 0.94
ABCF3-203ENST00000429586 ANTXR1Q9H6X2 564 aa20.95■□□□□ 0.94
ABCF3-203ENST00000429586 NUP188Q5SRE5 1749 aa20.95■□□□□ 0.94
ABCF3-203ENST00000429586 NEURL1BA8MQ27 555 aa20.95■□□□□ 0.94
ABCF3-203ENST00000429586 QTRT2Q9H974 415 aaKnown RBP20.95■□□□□ 0.94
ABCF3-203ENST00000429586 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-203ENST00000429586 PLBD2Q8NHP8 589 aa20.94■□□□□ 0.94
ABCF3-203ENST00000429586 TEX13AQ9BXU3 409 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-203ENST00000429586 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
ABCF3-203ENST00000429586 SMARCA5O60264 1052 aaPredicted RBP20.93■□□□□ 0.94
ABCF3-203ENST00000429586 HMMRO75330 724 aa20.93■□□□□ 0.94
ABCF3-203ENST00000429586 ATP8B2P98198 1209 aa20.93■□□□□ 0.94
ABCF3-203ENST00000429586 ZBTB1Q9Y2K1 713 aa20.93■□□□□ 0.94
ABCF3-203ENST00000429586 PALLDQ8WX93 1383 aa20.93■□□□□ 0.94
ABCF3-203ENST00000429586 GRM8O00222 908 aa20.92■□□□□ 0.94
ABCF3-203ENST00000429586 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
ABCF3-203ENST00000429586 KCNQ4P56696 695 aa20.92■□□□□ 0.94
ABCF3-203ENST00000429586 PPP1R42Q7Z4L9 355 aa20.92■□□□□ 0.94
ABCF3-203ENST00000429586 BCL11BQ9C0K0 894 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-203ENST00000429586 LOC102724428A0A0B4J2F2 783 aa20.91■□□□□ 0.94
ABCF3-203ENST00000429586 SIK1P57059 783 aa20.91■□□□□ 0.94
ABCF3-203ENST00000429586 GCKRQ14397 625 aa20.91■□□□□ 0.94
ABCF3-203ENST00000429586 SEPT12Q8IYM1 358 aa20.91■□□□□ 0.94
ABCF3-203ENST00000429586 SLKQ9H2G2 1235 aaPredicted RBP20.91■□□□□ 0.94
ABCF3-203ENST00000429586 ESPNB1AK53 854 aa20.91■□□□□ 0.94
ABCF3-203ENST00000429586 SRGAP3O43295 1099 aa20.9■□□□□ 0.94
ABCF3-203ENST00000429586 ITPK1Q13572 414 aa20.9■□□□□ 0.94
ABCF3-203ENST00000429586 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
ABCF3-203ENST00000429586 MRE11P49959 708 aa20.9■□□□□ 0.94
ABCF3-203ENST00000429586 C16orf71Q8IYS4 520 aaPredicted RBP20.9■□□□□ 0.94
ABCF3-203ENST00000429586 BTAF1O14981 1849 aa20.89■□□□□ 0.94
ABCF3-203ENST00000429586 MYH14Q7Z406 1995 aaKnown RBP20.89■□□□□ 0.93
ABCF3-203ENST00000429586 KAZALD1Q96I82 304 aa20.89■□□□□ 0.93
ABCF3-203ENST00000429586 PRDM4Q9UKN5 801 aa20.88■□□□□ 0.93
ABCF3-203ENST00000429586 UBE3BQ7Z3V4 1068 aa20.88■□□□□ 0.93
ABCF3-203ENST00000429586 OTUD7AQ8TE49 926 aaPredicted RBP20.88■□□□□ 0.93
ABCF3-203ENST00000429586 BICC1Q9H694 974 aaKnown RBP20.87■□□□□ 0.93
ABCF3-203ENST00000429586 SSH3Q8TE77 659 aa20.87■□□□□ 0.93
ABCF3-203ENST00000429586 SBF2Q86WG5 1849 aa20.87■□□□□ 0.93
ABCF3-203ENST00000429586 BRWD3Q6RI45 1802 aa20.86■□□□□ 0.93
ABCF3-203ENST00000429586 A0A087WZG4 1122 aa20.86■□□□□ 0.93
ABCF3-203ENST00000429586 UTYO14607 1347 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms