RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
ATG4B-210ENST00000428861 ERBB4Q15303 1308 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 YY1P25490 414 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 GNAI1P63096 354 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 DUSP27Q5VZP5 1158 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 C8orf58Q8NAV2 365 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 TSR2Q969E8 191 aaKnown RBP14□□□□□ -0.17
ATG4B-210ENST00000428861 SETDB2Q96T68 719 aa14□□□□□ -0.17
ATG4B-210ENST00000428861 MAP3K15Q6ZN16 1313 aa13.99□□□□□ -0.17
ATG4B-210ENST00000428861 ZBTB3Q9H5J0 574 aa13.99□□□□□ -0.17
ATG4B-210ENST00000428861 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
ATG4B-210ENST00000428861 ERVV-1B6SEH8 477 aa13.98□□□□□ -0.17
ATG4B-210ENST00000428861 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-210ENST00000428861 CALD1Q05682 793 aaKnown RBP13.98□□□□□ -0.17
ATG4B-210ENST00000428861 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
ATG4B-210ENST00000428861 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
ATG4B-210ENST00000428861 NIP7Q9Y221 180 aaKnown RBP eCLIP13.98□□□□□ -0.17
ATG4B-210ENST00000428861 BCS1LQ9Y276 419 aa13.98□□□□□ -0.17
ATG4B-210ENST00000428861 BRCA1P38398 1863 aaKnown RBP13.97□□□□□ -0.17
ATG4B-210ENST00000428861 RGL2O15211 777 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 GRIN3BO60391 1043 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 HOXB7P09629 217 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
ATG4B-210ENST00000428861 KIF6Q6ZMV9 814 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-210ENST00000428861 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
ATG4B-210ENST00000428861 ZNF652Q9Y2D9 606 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
ATG4B-210ENST00000428861 UBN2Q6ZU65 1347 aa13.96□□□□□ -0.17
ATG4B-210ENST00000428861 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
ATG4B-210ENST00000428861 AIMP1Q12904 312 aaKnown RBP13.96□□□□□ -0.17
ATG4B-210ENST00000428861 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.17
ATG4B-210ENST00000428861 CNBD1Q8NA66 436 aa13.96□□□□□ -0.17
ATG4B-210ENST00000428861 GPTP24298 496 aa13.95□□□□□ -0.18
ATG4B-210ENST00000428861 NBPF5PQ86XG9 351 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-210ENST00000428861 ZNF34Q8IZ26 560 aa13.95□□□□□ -0.18
ATG4B-210ENST00000428861 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
ATG4B-210ENST00000428861 PIM2Q9P1W9 311 aa13.95□□□□□ -0.18
ATG4B-210ENST00000428861 ATP10DQ9P241 1426 aa13.95□□□□□ -0.18
ATG4B-210ENST00000428861 DALRD3Q5D0E6 543 aaKnown RBP13.94□□□□□ -0.18
ATG4B-210ENST00000428861 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
ATG4B-210ENST00000428861 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
ATG4B-210ENST00000428861 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
ATG4B-210ENST00000428861 NUP98P52948 1817 aa13.94□□□□□ -0.18
ATG4B-210ENST00000428861 IL16Q14005 1332 aa13.93□□□□□ -0.18
ATG4B-210ENST00000428861 FANCIQ9NVI1 1328 aa13.93□□□□□ -0.18
ATG4B-210ENST00000428861 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
ATG4B-210ENST00000428861 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-210ENST00000428861 CHD4Q14839 1912 aa13.93□□□□□ -0.18
ATG4B-210ENST00000428861 ABCC12Q96J65 1359 aa13.93□□□□□ -0.18
ATG4B-210ENST00000428861 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-210ENST00000428861 ZNF521Q96K83 1311 aa13.92□□□□□ -0.18
ATG4B-210ENST00000428861 H0YIN7 160 aa13.92□□□□□ -0.18
ATG4B-210ENST00000428861 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
ATG4B-210ENST00000428861 ST5P78524 1137 aa13.92□□□□□ -0.18
ATG4B-210ENST00000428861 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
ATG4B-210ENST00000428861 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
ATG4B-210ENST00000428861 ZNF428Q96B54 188 aa13.92□□□□□ -0.18
ATG4B-210ENST00000428861 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
ATG4B-210ENST00000428861 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-210ENST00000428861 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 NPHP1O15259 732 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 NTSR2O95665 410 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 SRGNP10124 158 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 PDE6BP35913 854 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 ARHGAP27Q6ZUM4 889 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 ZNF784Q8NCA9 323 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-210ENST00000428861 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
ATG4B-210ENST00000428861 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
ATG4B-210ENST00000428861 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
ATG4B-210ENST00000428861 MIER1Q8N108 512 aa13.9□□□□□ -0.18
ATG4B-210ENST00000428861 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
ATG4B-210ENST00000428861 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.18
ATG4B-210ENST00000428861 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
ATG4B-210ENST00000428861 TNRC6CQ9HCJ0 1690 aaKnown RBP13.9□□□□□ -0.18
ATG4B-210ENST00000428861 PRELPP51888 382 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 TWISTNBQ3B726 338 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-210ENST00000428861 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 NLRP10Q86W26 655 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 PLBD2Q8NHP8 589 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 ARFGEF1Q9Y6D6 1849 aa13.89□□□□□ -0.19
ATG4B-210ENST00000428861 ADCY9O60503 1353 aa13.88□□□□□ -0.19
ATG4B-210ENST00000428861 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-210ENST00000428861 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
ATG4B-210ENST00000428861 G2E3Q7L622 706 aa13.88□□□□□ -0.19
ATG4B-210ENST00000428861 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
ATG4B-210ENST00000428861 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
ATG4B-210ENST00000428861 NYXQ9GZU5 481 aa13.88□□□□□ -0.19
ATG4B-210ENST00000428861 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-210ENST00000428861 ATP5J2-PTCD1G3V325 749 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 VAMP4O75379 141 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 GTF2E1P29083 439 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-210ENST00000428861 RASSF7Q02833 373 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 PARP10Q53GL7 1025 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 CCDC30Q5VVM6 783 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms