RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 NBPF26B4DH59 902 aa15.85■□□□□ 0.13
TTC3-208ENST00000428693 MYL6BP14649 208 aa15.85■□□□□ 0.13
TTC3-208ENST00000428693 RALBP1Q15311 655 aa15.85■□□□□ 0.13
TTC3-208ENST00000428693 NBPF10Q6P3W6 841 aaKnown RBP15.85■□□□□ 0.13
TTC3-208ENST00000428693 NBPF15Q8N660 670 aa15.85■□□□□ 0.13
TTC3-208ENST00000428693 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
TTC3-208ENST00000428693 SBF1O95248 1867 aa15.84■□□□□ 0.13
TTC3-208ENST00000428693 RIPK4P57078 832 aa15.84■□□□□ 0.13
TTC3-208ENST00000428693 CLEC4GQ6UXB4 293 aa15.84■□□□□ 0.13
TTC3-208ENST00000428693 DLEC1Q9Y238 1755 aa15.83■□□□□ 0.12
TTC3-208ENST00000428693 ANKRD31Q8N7Z5 1873 aa15.83■□□□□ 0.12
TTC3-208ENST00000428693 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
TTC3-208ENST00000428693 TPTE2Q6XPS3 522 aa15.83■□□□□ 0.12
TTC3-208ENST00000428693 CNKSR1Q969H4 720 aa15.83■□□□□ 0.12
TTC3-208ENST00000428693 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
TTC3-208ENST00000428693 NFKBIEO00221 500 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 EIF4A1P60842 406 aaKnown RBP15.82■□□□□ 0.12
TTC3-208ENST00000428693 HLFQ16534 295 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 KIF6Q6ZMV9 814 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 MASTLQ96GX5 879 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 BCORQ6W2J9 1755 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
TTC3-208ENST00000428693 SRGNP10124 158 aa15.81■□□□□ 0.12
TTC3-208ENST00000428693 APLP1P51693 650 aa15.81■□□□□ 0.12
TTC3-208ENST00000428693 PRELPP51888 382 aa15.81■□□□□ 0.12
TTC3-208ENST00000428693 CACNA1SQ13698 1873 aa15.81■□□□□ 0.12
TTC3-208ENST00000428693 STYK1Q6J9G0 422 aa15.81■□□□□ 0.12
TTC3-208ENST00000428693 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
TTC3-208ENST00000428693 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
TTC3-208ENST00000428693 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
TTC3-208ENST00000428693 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
TTC3-208ENST00000428693 ERFEQ4G0M1 354 aa15.8■□□□□ 0.12
TTC3-208ENST00000428693 RBM46Q8TBY0 533 aaKnown RBP15.8■□□□□ 0.12
TTC3-208ENST00000428693 TAOK3Q9H2K8 898 aa15.8■□□□□ 0.12
TTC3-208ENST00000428693 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
TTC3-208ENST00000428693 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
TTC3-208ENST00000428693 MYBBP1AQ9BQG0 1328 aaKnown RBP15.79■□□□□ 0.12
TTC3-208ENST00000428693 GLTPD2A6NH11 291 aa15.79■□□□□ 0.12
TTC3-208ENST00000428693 GPTP24298 496 aa15.79■□□□□ 0.12
TTC3-208ENST00000428693 DPY19L2Q6NUT2 758 aa15.79■□□□□ 0.12
TTC3-208ENST00000428693 ZC3H4Q9UPT8 1303 aaKnown RBP15.78■□□□□ 0.12
TTC3-208ENST00000428693 NPR1P16066 1061 aa15.78■□□□□ 0.12
TTC3-208ENST00000428693 LMOD3Q0VAK6 560 aa15.78■□□□□ 0.12
TTC3-208ENST00000428693 TTLL7Q6ZT98 887 aa15.78■□□□□ 0.12
TTC3-208ENST00000428693 NUTM1Q86Y26 1132 aa15.78■□□□□ 0.12
TTC3-208ENST00000428693 NECTIN2Q92692 538 aa15.78■□□□□ 0.12
TTC3-208ENST00000428693 SLX4Q8IY92 1834 aa15.78■□□□□ 0.12
TTC3-208ENST00000428693 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.12
TTC3-208ENST00000428693 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.12
TTC3-208ENST00000428693 VEGFAP15692 232 aaPredicted RBP15.77■□□□□ 0.12
TTC3-208ENST00000428693 TMPOP42166 694 aaKnown RBP15.77■□□□□ 0.12
TTC3-208ENST00000428693 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
TTC3-208ENST00000428693 NYXQ9GZU5 481 aa15.77■□□□□ 0.12
TTC3-208ENST00000428693 MAP3K15Q6ZN16 1313 aa15.76■□□□□ 0.11
TTC3-208ENST00000428693 HTRA3P83110 453 aa15.76■□□□□ 0.11
TTC3-208ENST00000428693 TIAM2Q8IVF5 1701 aa15.76■□□□□ 0.11
TTC3-208ENST00000428693 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
TTC3-208ENST00000428693 ERVV-1B6SEH8 477 aa15.75■□□□□ 0.11
TTC3-208ENST00000428693 FSTL1Q12841 308 aa15.75■□□□□ 0.11
TTC3-208ENST00000428693 CCDC93Q567U6 631 aa15.75■□□□□ 0.11
TTC3-208ENST00000428693 SMC1BQ8NDV3 1235 aa15.75■□□□□ 0.11
TTC3-208ENST00000428693 ANXA1P04083 346 aa15.74■□□□□ 0.11
TTC3-208ENST00000428693 OLFM4Q6UX06 510 aa15.74■□□□□ 0.11
TTC3-208ENST00000428693 TCERG1O14776 1098 aaKnown RBP15.73■□□□□ 0.11
TTC3-208ENST00000428693 RGL2O15211 777 aa15.73■□□□□ 0.11
TTC3-208ENST00000428693 ALDH1B1P30837 517 aa15.73■□□□□ 0.11
TTC3-208ENST00000428693 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
TTC3-208ENST00000428693 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
TTC3-208ENST00000428693 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
TTC3-208ENST00000428693 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
TTC3-208ENST00000428693 FER1L6Q2WGJ9 1857 aa15.73■□□□□ 0.11
TTC3-208ENST00000428693 NUP98P52948 1817 aa15.73■□□□□ 0.11
TTC3-208ENST00000428693 DDNO94850 711 aaPredicted RBP15.72■□□□□ 0.11
TTC3-208ENST00000428693 SUSD4Q5VX71 490 aa15.72■□□□□ 0.11
TTC3-208ENST00000428693 LTBP3Q9NS15 1303 aa15.71■□□□□ 0.11
TTC3-208ENST00000428693 PROSER3Q2NL68 480 aa15.71■□□□□ 0.11
TTC3-208ENST00000428693 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
TTC3-208ENST00000428693 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
TTC3-208ENST00000428693 ABCC12Q96J65 1359 aa15.71■□□□□ 0.11
TTC3-208ENST00000428693 ERBB4Q15303 1308 aa15.7■□□□□ 0.1
TTC3-208ENST00000428693 UBN2Q6ZU65 1347 aa15.7■□□□□ 0.1
TTC3-208ENST00000428693 KLRG2A4D1S0 409 aaPredicted RBP15.7■□□□□ 0.1
TTC3-208ENST00000428693 FKBP4Q02790 459 aaKnown RBP eCLIP15.7■□□□□ 0.1
TTC3-208ENST00000428693 GIGYF2Q6Y7W6 1299 aaKnown RBP15.7■□□□□ 0.1
TTC3-208ENST00000428693 RTKN2Q8IZC4 609 aa15.7■□□□□ 0.1
TTC3-208ENST00000428693 C7orf43Q8WVR3 580 aa15.7■□□□□ 0.1
TTC3-208ENST00000428693 DICER1Q9UPY3 1922 aaKnown RBP15.69■□□□□ 0.1
TTC3-208ENST00000428693 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
TTC3-208ENST00000428693 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
TTC3-208ENST00000428693 ZNF428Q96B54 188 aa15.69■□□□□ 0.1
TTC3-208ENST00000428693 RBM17Q96I25 401 aaKnown RBP15.69■□□□□ 0.1
TTC3-208ENST00000428693 BABAM1Q9NWV8 329 aa15.69■□□□□ 0.1
TTC3-208ENST00000428693 ARFGEF2Q9Y6D5 1785 aa15.69■□□□□ 0.1
TTC3-208ENST00000428693 PDIA6Q15084 440 aa15.68■□□□□ 0.1
TTC3-208ENST00000428693 PARP10Q53GL7 1025 aa15.68■□□□□ 0.1
TTC3-208ENST00000428693 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
TTC3-208ENST00000428693 ZNF34Q8IZ26 560 aa15.68■□□□□ 0.1
TTC3-208ENST00000428693 SYNE4Q8N205 404 aa15.68■□□□□ 0.1
TTC3-208ENST00000428693 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms