RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 MASTLQ96GX5 879 aa20.34■□□□□ 0.85
CTDSP1-202ENST00000428361 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
CTDSP1-202ENST00000428361 NIP7Q9Y221 180 aaKnown RBP eCLIP20.34■□□□□ 0.85
CTDSP1-202ENST00000428361 ERBB4Q15303 1308 aa20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 SBF1O95248 1867 aa20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 NBPF26B4DH59 902 aa20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 EIF4A1P60842 406 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 NBPF10Q6P3W6 841 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 NBPF15Q8N660 670 aa20.33■□□□□ 0.85
CTDSP1-202ENST00000428361 ERVV-1B6SEH8 477 aa20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 RIPK4P57078 832 aa20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 RASSF7Q02833 373 aa20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 WDR43Q15061 677 aaKnown RBP eCLIP20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
CTDSP1-202ENST00000428361 SRGNP10124 158 aa20.31■□□□□ 0.84
CTDSP1-202ENST00000428361 GTF2E1P29083 439 aaPredicted RBP20.31■□□□□ 0.84
CTDSP1-202ENST00000428361 TNRC6CQ9HCJ0 1690 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-202ENST00000428361 APLP1P51693 650 aa20.3■□□□□ 0.84
CTDSP1-202ENST00000428361 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 C21orf2O43822 256 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 NPR1P16066 1061 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 TMPOP42166 694 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 FSTL1Q12841 308 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 CCDC24Q8N4L8 307 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 TAOK3Q9H2K8 898 aa20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 COL11A2P13942 1736 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-202ENST00000428361 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
CTDSP1-202ENST00000428361 GLTPD2A6NH11 291 aa20.28■□□□□ 0.84
CTDSP1-202ENST00000428361 NFKBIEO00221 500 aa20.28■□□□□ 0.84
CTDSP1-202ENST00000428361 PRPF40BQ6NWY9 871 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-202ENST00000428361 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-202ENST00000428361 ARFGEF2Q9Y6D5 1785 aa20.26■□□□□ 0.83
CTDSP1-202ENST00000428361 IBTKQ9P2D0 1353 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-202ENST00000428361 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-202ENST00000428361 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
CTDSP1-202ENST00000428361 RUNDC1Q96C34 613 aa20.26■□□□□ 0.83
CTDSP1-202ENST00000428361 MYL6BP14649 208 aa20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 VEGFAP15692 232 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 ALDH1B1P30837 517 aa20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 ERFEQ4G0M1 354 aa20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 CCDC93Q567U6 631 aa20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 RRAGCQ9HB90 399 aa20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-202ENST00000428361 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
CTDSP1-202ENST00000428361 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
CTDSP1-202ENST00000428361 HLFQ16534 295 aa20.24■□□□□ 0.83
CTDSP1-202ENST00000428361 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
CTDSP1-202ENST00000428361 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
CTDSP1-202ENST00000428361 FAM177BA6PVY3 158 aa20.22■□□□□ 0.83
CTDSP1-202ENST00000428361 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
CTDSP1-202ENST00000428361 CCDC88AQ3V6T2 1871 aa20.22■□□□□ 0.83
CTDSP1-202ENST00000428361 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 RIC1Q4ADV7 1423 aa20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 SLX4Q8IY92 1834 aa20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 GIGYF2Q6Y7W6 1299 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 PPP1R42Q7Z4L9 355 aa20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 ZBTB3Q9H5J0 574 aa20.21■□□□□ 0.83
CTDSP1-202ENST00000428361 NUP98P52948 1817 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 EIF2S2P20042 333 aaKnown RBP20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 PRELPP51888 382 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 HSP90AB3PQ58FF7 597 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 CCDC146Q8IYE0 955 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
CTDSP1-202ENST00000428361 GRIPAP1Q4V328 841 aa20.19■□□□□ 0.82
CTDSP1-202ENST00000428361 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
CTDSP1-202ENST00000428361 RNF123Q5XPI4 1314 aa20.19■□□□□ 0.82
CTDSP1-202ENST00000428361 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■■□ 25.6
CTDSP1-202ENST00000428361 CRY2Q49AN0 593 aa20.18■□□□□ 0.82
CTDSP1-202ENST00000428361 C7orf43Q8WVR3 580 aa20.18■□□□□ 0.82
CTDSP1-202ENST00000428361 HOXB7P09629 217 aa20.17■□□□□ 0.82
CTDSP1-202ENST00000428361 GPTP24298 496 aa20.17■□□□□ 0.82
CTDSP1-202ENST00000428361 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
CTDSP1-202ENST00000428361 ZNF34Q8IZ26 560 aa20.17■□□□□ 0.82
CTDSP1-202ENST00000428361 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
CTDSP1-202ENST00000428361 CHL1O00533 1208 aa20.16■□□□□ 0.82
CTDSP1-202ENST00000428361 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
CTDSP1-202ENST00000428361 TMX4Q9H1E5 349 aaPredicted RBP20.16■□□□□ 0.82
CTDSP1-202ENST00000428361 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
CTDSP1-202ENST00000428361 IQCA1LA6NCM1 817 aa20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 LAS1LQ9Y4W2 734 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 UBN2Q6ZU65 1347 aa20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
CTDSP1-202ENST00000428361 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
CTDSP1-202ENST00000428361 PDIA6Q15084 440 aa20.14■□□□□ 0.81
CTDSP1-202ENST00000428361 SUSD4Q5VX71 490 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms