RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 BMP2KLQ5H9B9 411 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 NBPF10Q6P3W6 841 aaKnown RBP19.47■□□□□ 0.71
TVP23C-203ENST00000428082 NBPF15Q8N660 670 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 TBC1D2Q9BYX2 928 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 STARD3NLO95772 234 aa19.46■□□□□ 0.71
TVP23C-203ENST00000428082 PTPRCP08575 1304 aa19.46■□□□□ 0.71
TVP23C-203ENST00000428082 COL5A3P25940 1745 aaPredicted RBP19.45■□□□□ 0.7
TVP23C-203ENST00000428082 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
TVP23C-203ENST00000428082 LRP10Q7Z4F1 713 aa19.45■□□□□ 0.7
TVP23C-203ENST00000428082 HYPKQ9NX55 129 aa19.45■□□□□ 0.7
TVP23C-203ENST00000428082 ERBB4Q15303 1308 aa19.45■□□□□ 0.7
TVP23C-203ENST00000428082 TNS1Q9HBL0 1735 aaKnown RBP19.44■□□□□ 0.7
TVP23C-203ENST00000428082 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
TVP23C-203ENST00000428082 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
TVP23C-203ENST00000428082 LNPKQ9C0E8 428 aa19.43■□□□□ 0.7
TVP23C-203ENST00000428082 ANTXR1Q9H6X2 564 aa19.43■□□□□ 0.7
TVP23C-203ENST00000428082 CCNL1Q9UK58 526 aaPredicted RBP19.43■□□□□ 0.7
TVP23C-203ENST00000428082 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
TVP23C-203ENST00000428082 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
TVP23C-203ENST00000428082 F6X3S4 739 aa19.42■□□□□ 0.7
TVP23C-203ENST00000428082 RBM25P49756 843 aaKnown RBP19.42■□□□□ 0.7
TVP23C-203ENST00000428082 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
TVP23C-203ENST00000428082 LINC00116Q8NCU8 138 aa19.42■□□□□ 0.7
TVP23C-203ENST00000428082 ZBTB1Q9Y2K1 713 aa19.42■□□□□ 0.7
TVP23C-203ENST00000428082 XAGE3Q8WTP9 111 aa19.41■□□□□ 0.7
TVP23C-203ENST00000428082 APBA3O96018 575 aa19.41■□□□□ 0.7
TVP23C-203ENST00000428082 CRKLP46109 303 aaKnown RBP19.41■□□□□ 0.7
TVP23C-203ENST00000428082 INTS3Q68E01 1043 aaKnown RBP19.41■□□□□ 0.7
TVP23C-203ENST00000428082 COPS6Q7L5N1 327 aa19.41■□□□□ 0.7
TVP23C-203ENST00000428082 HSCBQ8IWL3 235 aa19.41■□□□□ 0.7
TVP23C-203ENST00000428082 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
TVP23C-203ENST00000428082 RREB1Q92766 1687 aa19.41■□□□□ 0.7
TVP23C-203ENST00000428082 INTS5Q6P9B9 1019 aaKnown RBP19.4■□□□□ 0.7
TVP23C-203ENST00000428082 LRRC4BQ9NT99 713 aa19.39■□□□□ 0.7
TVP23C-203ENST00000428082 CCDC87Q9NVE4 849 aa19.39■□□□□ 0.7
TVP23C-203ENST00000428082 ADCY9O60503 1353 aa19.39■□□□□ 0.69
TVP23C-203ENST00000428082 PI4KAP2A4QPH2 592 aa19.39■□□□□ 0.69
TVP23C-203ENST00000428082 PI4KAP1Q8N8J0 262 aa19.39■□□□□ 0.69
TVP23C-203ENST00000428082 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
TVP23C-203ENST00000428082 PLSCR1O15162 318 aa19.38■□□□□ 0.69
TVP23C-203ENST00000428082 SNX21Q969T3 373 aa19.38■□□□□ 0.69
TVP23C-203ENST00000428082 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
TVP23C-203ENST00000428082 SLC4A10Q6U841 1118 aa19.37■□□□□ 0.69
TVP23C-203ENST00000428082 PROM2Q8N271 834 aa19.37■□□□□ 0.69
TVP23C-203ENST00000428082 TTLL7Q6ZT98 887 aa19.37■□□□□ 0.69
TVP23C-203ENST00000428082 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
TVP23C-203ENST00000428082 DDX58O95786 925 aaKnown RBP19.36■□□□□ 0.69
TVP23C-203ENST00000428082 TXNRD1Q16881 649 aa19.36■□□□□ 0.69
TVP23C-203ENST00000428082 KSR2Q6VAB6 950 aa19.36■□□□□ 0.69
TVP23C-203ENST00000428082 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
TVP23C-203ENST00000428082 CNTNAP4Q9C0A0 1308 aa19.36■□□□□ 0.69
TVP23C-203ENST00000428082 IL6STP40189 918 aaPredicted RBP19.35■□□□□ 0.69
TVP23C-203ENST00000428082 SLC27A3Q5K4L6 730 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 DNAAF4Q8WXU2 420 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 C1orf115Q9H7X2 142 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 C4BP0C0L5 1744 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 SIRT2Q8IXJ6 389 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
TVP23C-203ENST00000428082 N4BP2Q86UW6 1770 aaPredicted RBP19.34■□□□□ 0.69
TVP23C-203ENST00000428082 NUP188Q5SRE5 1749 aa19.34■□□□□ 0.69
TVP23C-203ENST00000428082 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
TVP23C-203ENST00000428082 RIC3Q7Z5B4 369 aa19.34■□□□□ 0.69
TVP23C-203ENST00000428082 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
TVP23C-203ENST00000428082 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
TVP23C-203ENST00000428082 PXDNLA1KZ92 1463 aa19.33■□□□□ 0.69
TVP23C-203ENST00000428082 RC3H1Q5TC82 1133 aaKnown RBP19.33■□□□□ 0.69
TVP23C-203ENST00000428082 ANKRD44Q8N8A2 993 aa19.33■□□□□ 0.68
TVP23C-203ENST00000428082 PLBD2Q8NHP8 589 aa19.33■□□□□ 0.68
TVP23C-203ENST00000428082 CDC45O75419 566 aa19.32■□□□□ 0.68
TVP23C-203ENST00000428082 ARXQ96QS3 562 aa19.32■□□□□ 0.68
TVP23C-203ENST00000428082 ZBTB3Q9H5J0 574 aa19.32■□□□□ 0.68
TVP23C-203ENST00000428082 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
TVP23C-203ENST00000428082 SMIM5Q71RC9 77 aa19.31■□□□□ 0.68
TVP23C-203ENST00000428082 BEND3Q5T5X7 828 aa19.31■□□□□ 0.68
TVP23C-203ENST00000428082 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
TVP23C-203ENST00000428082 COL15A1P39059 1388 aa19.3■□□□□ 0.68
TVP23C-203ENST00000428082 GNPATO15228 680 aa19.3■□□□□ 0.68
TVP23C-203ENST00000428082 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
TVP23C-203ENST00000428082 KIF6Q6ZMV9 814 aa19.3■□□□□ 0.68
TVP23C-203ENST00000428082 ATP10DQ9P241 1426 aa19.3■□□□□ 0.68
TVP23C-203ENST00000428082 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
TVP23C-203ENST00000428082 AMIGO3Q86WK7 504 aa19.29■□□□□ 0.68
TVP23C-203ENST00000428082 DZIP3Q86Y13 1208 aaKnown RBP19.29■□□□□ 0.68
TVP23C-203ENST00000428082 METTL22Q9BUU2 404 aaPredicted RBP19.29■□□□□ 0.68
TVP23C-203ENST00000428082 CIZ1Q9ULV3 898 aaPredicted RBP19.29■□□□□ 0.68
TVP23C-203ENST00000428082 SF3B2Q13435 895 aaKnown RBP19.29■□□□□ 0.68
TVP23C-203ENST00000428082 EZH2Q15910 746 aaKnown RBP19.29■□□□□ 0.68
TVP23C-203ENST00000428082 CAMKK2Q96RR4 588 aa19.29■□□□□ 0.68
TVP23C-203ENST00000428082 MYD88Q99836 296 aa19.29■□□□□ 0.68
TVP23C-203ENST00000428082 SRCIN1Q9C0H9 1055 aa19.29■□□□□ 0.68
TVP23C-203ENST00000428082 MAP3K15Q6ZN16 1313 aa19.29■□□□□ 0.68
TVP23C-203ENST00000428082 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
TVP23C-203ENST00000428082 HMMRO75330 724 aa19.28■□□□□ 0.68
TVP23C-203ENST00000428082 TBC1D9Q6ZT07 1266 aa19.28■□□□□ 0.68
TVP23C-203ENST00000428082 AK7Q96M32 723 aa19.28■□□□□ 0.68
TVP23C-203ENST00000428082 CWF19L2Q2TBE0 894 aaKnown RBP19.27■□□□□ 0.68
TVP23C-203ENST00000428082 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms