RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 CAMTA2O94983 1202 aa22.73■■□□□ 1.23
PSMD4-203ENST00000427779 HSPA1AP0DMV8 641 aaKnown RBP22.73■■□□□ 1.23
PSMD4-203ENST00000427779 HSPA1BP0DMV9 641 aaKnown RBP22.73■■□□□ 1.23
PSMD4-203ENST00000427779 DZIP3Q86Y13 1208 aaKnown RBP22.72■■□□□ 1.23
PSMD4-203ENST00000427779 MASTLQ96GX5 879 aa22.72■■□□□ 1.23
PSMD4-203ENST00000427779 SRGNP10124 158 aa22.71■■□□□ 1.23
PSMD4-203ENST00000427779 PRPF40BQ6NWY9 871 aaKnown RBP22.71■■□□□ 1.23
PSMD4-203ENST00000427779 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.22
PSMD4-203ENST00000427779 CHADLQ6NUI6 762 aa22.7■■□□□ 1.22
PSMD4-203ENST00000427779 CFAP53Q96M91 514 aa22.7■■□□□ 1.22
PSMD4-203ENST00000427779 CAPN15O75808 1086 aa22.69■■□□□ 1.22
PSMD4-203ENST00000427779 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
PSMD4-203ENST00000427779 ZNF652Q9Y2D9 606 aa22.69■■□□□ 1.22
PSMD4-203ENST00000427779 SCN4AP35499 1836 aa22.68■■□□□ 1.22
PSMD4-203ENST00000427779 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
PSMD4-203ENST00000427779 NBPF5PQ86XG9 351 aaPredicted RBP22.68■■□□□ 1.22
PSMD4-203ENST00000427779 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
PSMD4-203ENST00000427779 IQCA1LA6NCM1 817 aa22.67■■□□□ 1.22
PSMD4-203ENST00000427779 KCNQ3O43525 872 aa22.67■■□□□ 1.22
PSMD4-203ENST00000427779 DDNO94850 711 aaPredicted RBP22.67■■□□□ 1.22
PSMD4-203ENST00000427779 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
PSMD4-203ENST00000427779 PHACTR3Q96KR7 559 aa22.66■■□□□ 1.22
PSMD4-203ENST00000427779 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
PSMD4-203ENST00000427779 NUDCQ9Y266 331 aa22.66■■□□□ 1.22
PSMD4-203ENST00000427779 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
PSMD4-203ENST00000427779 SNRPA1P09661 255 aaKnown RBP22.65■■□□□ 1.22
PSMD4-203ENST00000427779 CCDC93Q567U6 631 aa22.65■■□□□ 1.22
PSMD4-203ENST00000427779 RGL2O15211 777 aa22.64■■□□□ 1.21
PSMD4-203ENST00000427779 NPR1P16066 1061 aa22.64■■□□□ 1.21
PSMD4-203ENST00000427779 PIP4K2AP48426 406 aaPredicted RBP22.63■■□□□ 1.21
PSMD4-203ENST00000427779 TPTE2Q6XPS3 522 aa22.62■■□□□ 1.21
PSMD4-203ENST00000427779 LDHDQ86WU2 507 aa22.62■■□□□ 1.21
PSMD4-203ENST00000427779 L3MBTL3Q96JM7 780 aaPredicted RBP22.62■■□□□ 1.21
PSMD4-203ENST00000427779 MKRN1Q9UHC7 482 aaKnown RBP22.62■■□□□ 1.21
PSMD4-203ENST00000427779 POTEIP0CG38 1075 aa22.61■■□□□ 1.21
PSMD4-203ENST00000427779 POTEJP0CG39 1038 aa22.61■■□□□ 1.21
PSMD4-203ENST00000427779 C7orf43Q8WVR3 580 aa22.61■■□□□ 1.21
PSMD4-203ENST00000427779 NIP7Q9Y221 180 aaKnown RBP eCLIP22.61■■□□□ 1.21
PSMD4-203ENST00000427779 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
PSMD4-203ENST00000427779 KLRG2A4D1S0 409 aaPredicted RBP22.6■■□□□ 1.21
PSMD4-203ENST00000427779 FKBP4Q02790 459 aaKnown RBP eCLIP22.6■■□□□ 1.21
PSMD4-203ENST00000427779 LAMB4A4D0S4 1761 aa22.59■■□□□ 1.21
PSMD4-203ENST00000427779 U2AF1L5P0DN76 240 aaPredicted RBP22.59■■□□□ 1.21
PSMD4-203ENST00000427779 U2AF1Q01081 240 aaKnown RBP eCLIP22.59■■□□□ 1.21
PSMD4-203ENST00000427779 MCM10Q7L590 875 aa22.59■■□□□ 1.21
PSMD4-203ENST00000427779 RTKN2Q8IZC4 609 aa22.59■■□□□ 1.21
PSMD4-203ENST00000427779 TAF1DQ9H5J8 278 aaPredicted RBP22.59■■□□□ 1.21
PSMD4-203ENST00000427779 PASKQ96RG2 1323 aa22.58■■□□□ 1.21
PSMD4-203ENST00000427779 CNTNAP1P78357 1384 aa22.58■■□□□ 1.21
PSMD4-203ENST00000427779 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
PSMD4-203ENST00000427779 ALDH1B1P30837 517 aa22.57■■□□□ 1.2
PSMD4-203ENST00000427779 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
PSMD4-203ENST00000427779 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
PSMD4-203ENST00000427779 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
PSMD4-203ENST00000427779 ZNF277Q9NRM2 450 aaPredicted RBP22.56■■□□□ 1.2
PSMD4-203ENST00000427779 HACL1Q9UJ83 578 aa22.56■■□□□ 1.2
PSMD4-203ENST00000427779 GTF2E1P29083 439 aaPredicted RBP22.55■■□□□ 1.2
PSMD4-203ENST00000427779 ZNF541Q9H0D2 1346 aa22.55■■□□□ 1.2
PSMD4-203ENST00000427779 FAM177BA6PVY3 158 aa22.54■■□□□ 1.2
PSMD4-203ENST00000427779 EAPPQ56P03 285 aaPredicted RBP22.54■■□□□ 1.2
PSMD4-203ENST00000427779 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
PSMD4-203ENST00000427779 TMEM88BA6NKF7 163 aa22.53■■□□□ 1.2
PSMD4-203ENST00000427779 IARSP41252 1262 aaKnown RBP22.53■■□□□ 1.2
PSMD4-203ENST00000427779 DCTN1Q14203 1278 aa22.53■■□□□ 1.2
PSMD4-203ENST00000427779 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
PSMD4-203ENST00000427779 PNMA8AQ86V59 439 aaPredicted RBP22.53■■□□□ 1.2
PSMD4-203ENST00000427779 PPP2R1AP30153 589 aa22.52■■□□□ 1.2
PSMD4-203ENST00000427779 EPHX2P34913 555 aa22.52■■□□□ 1.2
PSMD4-203ENST00000427779 AIDAQ96BJ3 306 aa22.52■■□□□ 1.2
PSMD4-203ENST00000427779 NYXQ9GZU5 481 aa22.52■■□□□ 1.2
PSMD4-203ENST00000427779 CLEC11AQ9Y240 323 aa22.52■■□□□ 1.2
PSMD4-203ENST00000427779 NUP98P52948 1817 aa22.52■■□□□ 1.2
PSMD4-203ENST00000427779 ITGBL1O95965 494 aaPredicted RBP22.51■■□□□ 1.19
PSMD4-203ENST00000427779 HLFQ16534 295 aa22.51■■□□□ 1.19
PSMD4-203ENST00000427779 FZD9O00144 591 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 NEFMP07197 916 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 OLFM4Q6UX06 510 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 SYNE4Q8N205 404 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 JDP2Q8WYK2 163 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 PSMD1Q99460 953 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 PRDM10Q9NQV6 1147 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 DLG5Q8TDM6 1919 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 KDM3BQ7LBC6 1761 aa22.5■■□□□ 1.19
PSMD4-203ENST00000427779 FOXN1O15353 648 aa22.49■■□□□ 1.19
PSMD4-203ENST00000427779 CC2D2BQ6DHV5 1058 aa22.49■■□□□ 1.19
PSMD4-203ENST00000427779 GPC2Q8N158 579 aa22.49■■□□□ 1.19
PSMD4-203ENST00000427779 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
PSMD4-203ENST00000427779 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
PSMD4-203ENST00000427779 ERVV-1B6SEH8 477 aa22.48■■□□□ 1.19
PSMD4-203ENST00000427779 CTCFP49711 727 aaPredicted RBP22.48■■□□□ 1.19
PSMD4-203ENST00000427779 VEGFBP49765 207 aa22.48■■□□□ 1.19
PSMD4-203ENST00000427779 CRY2Q49AN0 593 aa22.48■■□□□ 1.19
PSMD4-203ENST00000427779 KIF6Q6ZMV9 814 aa22.47■■□□□ 1.19
PSMD4-203ENST00000427779 EIF6P56537 245 aaKnown RBP22.46■■□□□ 1.19
PSMD4-203ENST00000427779 GRIPAP1Q4V328 841 aa22.46■■□□□ 1.19
PSMD4-203ENST00000427779 CNTROBQ8N137 903 aa22.46■■□□□ 1.19
PSMD4-203ENST00000427779 RPGRQ92834 1020 aaKnown RBP22.46■■□□□ 1.19
PSMD4-203ENST00000427779 MAP3K15Q6ZN16 1313 aa22.46■■□□□ 1.19
PSMD4-203ENST00000427779 ABCC12Q96J65 1359 aa22.46■■□□□ 1.19
PSMD4-203ENST00000427779 IBTKQ9P2D0 1353 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms