RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CD2APQ9Y5K6 639 aa32.5■■■□□ 2.79
HERPUD2-205ENST00000427455 TSPYL6Q8N831 410 aa32.49■■■□□ 2.79
HERPUD2-205ENST00000427455 C10orf71Q711Q0 1435 aa32.49■■■□□ 2.79
HERPUD2-205ENST00000427455 TBC1D9BQ66K14 1250 aa32.48■■■□□ 2.79
HERPUD2-205ENST00000427455 TTLL7Q6ZT98 887 aa32.48■■■□□ 2.79
HERPUD2-205ENST00000427455 KIF13BQ9NQT8 1826 aa32.48■■■□□ 2.79
HERPUD2-205ENST00000427455 NRXN2Q9P2S2 1712 aa32.48■■■□□ 2.79
HERPUD2-205ENST00000427455 MAP3K15Q6ZN16 1313 aa32.48■■■□□ 2.79
HERPUD2-205ENST00000427455 ERVV-1B6SEH8 477 aa32.47■■■□□ 2.79
HERPUD2-205ENST00000427455 TWISTNBQ3B726 338 aaPredicted RBP32.47■■■□□ 2.79
HERPUD2-205ENST00000427455 CARMIL3Q8ND23 1372 aa32.46■■■□□ 2.79
HERPUD2-205ENST00000427455 BICDL1Q6ZP65 573 aa32.46■■■□□ 2.79
HERPUD2-205ENST00000427455 AFDNP55196 1824 aaKnown RBP32.46■■■□□ 2.79
HERPUD2-205ENST00000427455 E9PSI1 815 aa32.44■■■□□ 2.78
HERPUD2-205ENST00000427455 CCDC30Q5VVM6 783 aa32.44■■■□□ 2.78
HERPUD2-205ENST00000427455 HYPKQ9NX55 129 aa32.44■■■□□ 2.78
HERPUD2-205ENST00000427455 NUP98P52948 1817 aa32.43■■■□□ 2.78
HERPUD2-205ENST00000427455 EXOSC9Q06265 439 aaKnown RBP32.43■■■□□ 2.78
HERPUD2-205ENST00000427455 XAGE3Q8WTP9 111 aa32.43■■■□□ 2.78
HERPUD2-205ENST00000427455 SETDB2Q96T68 719 aa32.43■■■□□ 2.78
HERPUD2-205ENST00000427455 ZBTB3Q9H5J0 574 aa32.43■■■□□ 2.78
HERPUD2-205ENST00000427455 HLFQ16534 295 aa32.42■■■□□ 2.78
HERPUD2-205ENST00000427455 COPS6Q7L5N1 327 aa32.42■■■□□ 2.78
HERPUD2-205ENST00000427455 NLGN2Q8NFZ4 835 aa32.42■■■□□ 2.78
HERPUD2-205ENST00000427455 ATP10DQ9P241 1426 aa32.42■■■□□ 2.78
HERPUD2-205ENST00000427455 SERPINB2P05120 415 aa32.41■■■□□ 2.78
HERPUD2-205ENST00000427455 AIMP1Q12904 312 aaKnown RBP32.4■■■□□ 2.78
HERPUD2-205ENST00000427455 NIP7Q9Y221 180 aaKnown RBP eCLIP32.38■■■□□ 2.77
HERPUD2-205ENST00000427455 KIAA1551Q9HCM1 1747 aa32.37■■■□□ 2.77
HERPUD2-205ENST00000427455 SLFN5Q08AF3 891 aa32.37■■■□□ 2.77
HERPUD2-205ENST00000427455 GIGYF2Q6Y7W6 1299 aaKnown RBP32.37■■■□□ 2.77
HERPUD2-205ENST00000427455 STK31Q9BXU1 1019 aa32.37■■■□□ 2.77
HERPUD2-205ENST00000427455 HNRNPUQ00839 825 aaKnown RBP eCLIP32.36■■■□□ 2.77
HERPUD2-205ENST00000427455 PXDNLA1KZ92 1463 aa32.35■■■□□ 2.77
HERPUD2-205ENST00000427455 ANKRD36CQ5JPF3 1778 aa32.35■■■□□ 2.77
HERPUD2-205ENST00000427455 VAMP4O75379 141 aa32.35■■■□□ 2.77
HERPUD2-205ENST00000427455 TGFB2P61812 414 aa32.34■■■□□ 2.77
HERPUD2-205ENST00000427455 CNBD1Q8NA66 436 aa32.33■■■□□ 2.77
HERPUD2-205ENST00000427455 PLBD2Q8NHP8 589 aa32.33■■■□□ 2.77
HERPUD2-205ENST00000427455 CDCA7LQ96GN5 454 aa32.33■■■□□ 2.77
HERPUD2-205ENST00000427455 HSP90AB3PQ58FF7 597 aa32.32■■■□□ 2.76
HERPUD2-205ENST00000427455 PRR5LQ6MZQ0 368 aa32.32■■■□□ 2.76
HERPUD2-205ENST00000427455 NBPF5PQ86XG9 351 aaPredicted RBP32.32■■■□□ 2.76
HERPUD2-205ENST00000427455 PHAXQ9H814 394 aaKnown RBP32.32■■■□□ 2.76
HERPUD2-205ENST00000427455 ARFGEF2Q9Y6D5 1785 aa32.32■■■□□ 2.76
HERPUD2-205ENST00000427455 ANKRD13DQ6ZTN6 518 aa32.31■■■□□ 2.76
HERPUD2-205ENST00000427455 N4BP2Q86UW6 1770 aaPredicted RBP32.31■■■□□ 2.76
HERPUD2-205ENST00000427455 TCERG1O14776 1098 aaKnown RBP32.3■■■□□ 2.76
HERPUD2-205ENST00000427455 NPHP1O15259 732 aa32.3■■■□□ 2.76
HERPUD2-205ENST00000427455 ZNF34Q8IZ26 560 aa32.3■■■□□ 2.76
HERPUD2-205ENST00000427455 CACNA1FO60840 1977 aa32.3■■■□□ 2.76
HERPUD2-205ENST00000427455 IBTKQ9P2D0 1353 aaPredicted RBP32.3■■■□□ 2.76
HERPUD2-205ENST00000427455 UBN2Q6ZU65 1347 aa32.29■■■□□ 2.76
HERPUD2-205ENST00000427455 GPTP24298 496 aa32.29■■■□□ 2.76
HERPUD2-205ENST00000427455 TRMT2AQ8IZ69 625 aaKnown RBP32.29■■■□□ 2.76
HERPUD2-205ENST00000427455 DCAF8L1A6NGE4 600 aa32.28■■■□□ 2.76
HERPUD2-205ENST00000427455 ST5P78524 1137 aa32.28■■■□□ 2.76
HERPUD2-205ENST00000427455 ANKRD31Q8N7Z5 1873 aa32.28■■■□□ 2.76
HERPUD2-205ENST00000427455 SLC4A2P04920 1241 aa32.27■■■□□ 2.76
HERPUD2-205ENST00000427455 PARP10Q53GL7 1025 aa32.27■■■□□ 2.76
HERPUD2-205ENST00000427455 TPTE2Q6XPS3 522 aa32.27■■■□□ 2.76
HERPUD2-205ENST00000427455 DDX58O95786 925 aaKnown RBP32.26■■■□□ 2.75
HERPUD2-205ENST00000427455 NYXQ9GZU5 481 aa32.26■■■□□ 2.75
HERPUD2-205ENST00000427455 GOLGB1Q14789 3259 aaKnown RBP32.25■■■□□ 2.75
HERPUD2-205ENST00000427455 TCIRG1Q13488 830 aa32.25■■■□□ 2.75
HERPUD2-205ENST00000427455 BRIP1Q9BX63 1249 aa32.25■■■□□ 2.75
HERPUD2-205ENST00000427455 BRCA1P38398 1863 aaKnown RBP32.25■■■□□ 2.75
HERPUD2-205ENST00000427455 A0A0G2JLW4 131 aa32.24■■■□□ 2.75
HERPUD2-205ENST00000427455 FAM177BA6PVY3 158 aa32.24■■■□□ 2.75
HERPUD2-205ENST00000427455 DPEP1P16444 411 aa32.24■■■□□ 2.75
HERPUD2-205ENST00000427455 RIC3Q7Z5B4 369 aa32.24■■■□□ 2.75
HERPUD2-205ENST00000427455 DLEC1Q9Y238 1755 aa32.24■■■□□ 2.75
HERPUD2-205ENST00000427455 CCDC24Q8N4L8 307 aa32.23■■■□□ 2.75
HERPUD2-205ENST00000427455 PDE6BP35913 854 aa32.22■■■□□ 2.75
HERPUD2-205ENST00000427455 ZBED9Q6R2W3 1325 aa32.22■■■□□ 2.75
HERPUD2-205ENST00000427455 FLIIQ13045 1269 aa32.21■■■□□ 2.75
HERPUD2-205ENST00000427455 GPR162Q16538 588 aa32.21■■■□□ 2.75
HERPUD2-205ENST00000427455 SUSD4Q5VX71 490 aa32.21■■■□□ 2.75
HERPUD2-205ENST00000427455 G2E3Q7L622 706 aa32.21■■■□□ 2.75
HERPUD2-205ENST00000427455 PPP1R42Q7Z4L9 355 aa32.21■■■□□ 2.75
HERPUD2-205ENST00000427455 PELP1Q8IZL8 1130 aaKnown RBP32.21■■■□□ 2.75
HERPUD2-205ENST00000427455 COL11A2P13942 1736 aaPredicted RBP32.2■■■□□ 2.75
HERPUD2-205ENST00000427455 NTSR2O95665 410 aa32.2■■■□□ 2.75
HERPUD2-205ENST00000427455 GTF2E1P29083 439 aaPredicted RBP32.2■■■□□ 2.75
HERPUD2-205ENST00000427455 CHRNA5P30532 468 aa32.2■■■□□ 2.75
HERPUD2-205ENST00000427455 NLRP10Q86W26 655 aa32.2■■■□□ 2.75
HERPUD2-205ENST00000427455 PDZRN3Q9UPQ7 1066 aa32.2■■■□□ 2.75
HERPUD2-205ENST00000427455 KCNA3P22001 575 aa32.19■■■□□ 2.74
HERPUD2-205ENST00000427455 ZNF428Q96B54 188 aa32.19■■■□□ 2.74
HERPUD2-205ENST00000427455 ISCA1Q9BUE6 129 aa32.19■■■□□ 2.74
HERPUD2-205ENST00000427455 RNF123Q5XPI4 1314 aa32.19■■■□□ 2.74
HERPUD2-205ENST00000427455 RIC1Q4ADV7 1423 aa32.18■■■□□ 2.74
HERPUD2-205ENST00000427455 KSR2Q6VAB6 950 aa32.18■■■□□ 2.74
HERPUD2-205ENST00000427455 C2CD5Q86YS7 1000 aa32.18■■■□□ 2.74
HERPUD2-205ENST00000427455 UTP14AQ9BVJ6 771 aaKnown RBP32.18■■■□□ 2.74
HERPUD2-205ENST00000427455 ADCY9O60503 1353 aa32.18■■■□□ 2.74
HERPUD2-205ENST00000427455 ABCC12Q96J65 1359 aa32.18■■■□□ 2.74
HERPUD2-205ENST00000427455 H0YIN7 160 aa32.17■■■□□ 2.74
HERPUD2-205ENST00000427455 CT47B1P0C2W7 299 aaPredicted RBP32.17■■■□□ 2.74
HERPUD2-205ENST00000427455 YBX3P16989 372 aaKnown RBP eCLIP32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 282.3 ms