RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 KIAA1024Q9UPX6 916 aa10.25□□□□□ -0.77
LINC00458-202ENST00000427299 SH3PXD2AQ5TCZ1 1133 aa10.24□□□□□ -0.77
LINC00458-202ENST00000427299 SYT9Q86SS6 491 aa10.24□□□□□ -0.77
LINC00458-202ENST00000427299 TRIM50Q86XT4 487 aa10.24□□□□□ -0.77
LINC00458-202ENST00000427299 PLEKHM2Q8IWE5 1019 aa10.24□□□□□ -0.77
LINC00458-202ENST00000427299 ZNF232Q9UNY5 417 aa10.24□□□□□ -0.77
LINC00458-202ENST00000427299 SERTM1A2A2V5 107 aa10.23□□□□□ -0.77
LINC00458-202ENST00000427299 POM121CA8CG34 1229 aa10.23□□□□□ -0.77
LINC00458-202ENST00000427299 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
LINC00458-202ENST00000427299 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
LINC00458-202ENST00000427299 SIN3BO75182 1162 aa10.22□□□□□ -0.77
LINC00458-202ENST00000427299 CLDN10P78369 228 aa10.22□□□□□ -0.77
LINC00458-202ENST00000427299 POTEAQ6S8J7 498 aa10.22□□□□□ -0.77
LINC00458-202ENST00000427299 Q8N3U1 123 aa10.22□□□□□ -0.77
LINC00458-202ENST00000427299 TPCN2Q8NHX9 752 aa10.22□□□□□ -0.77
LINC00458-202ENST00000427299 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
LINC00458-202ENST00000427299 USP17L3A6NCW0 530 aa10.21□□□□□ -0.77
LINC00458-202ENST00000427299 USP17L4A6NCW7 530 aa10.21□□□□□ -0.77
LINC00458-202ENST00000427299 ADARB2-AS1A8MUL3 147 aa10.21□□□□□ -0.77
LINC00458-202ENST00000427299 HIRAP54198 1017 aaPredicted RBP10.21□□□□□ -0.77
LINC00458-202ENST00000427299 USP17L2Q6R6M4 530 aa10.21□□□□□ -0.77
LINC00458-202ENST00000427299 USP17L1Q7RTZ2 530 aa10.21□□□□□ -0.77
LINC00458-202ENST00000427299 RAD21O60216 631 aa10.2□□□□□ -0.78
LINC00458-202ENST00000427299 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
LINC00458-202ENST00000427299 SFSWAPQ12872 951 aaKnown RBP10.2□□□□□ -0.78
LINC00458-202ENST00000427299 CCDC102BQ68D86 513 aa10.2□□□□□ -0.78
LINC00458-202ENST00000427299 SLC30A3Q99726 388 aa10.2□□□□□ -0.78
LINC00458-202ENST00000427299 TSPAN10Q9H1Z9 355 aaPredicted RBP10.2□□□□□ -0.78
LINC00458-202ENST00000427299 ALAS2P22557 587 aa10.19□□□□□ -0.78
LINC00458-202ENST00000427299 ATP1A2P50993 1020 aa10.19□□□□□ -0.78
LINC00458-202ENST00000427299 PSMA6P60900 246 aaKnown RBP10.19□□□□□ -0.78
LINC00458-202ENST00000427299 C1orf53Q5VUE5 145 aa10.19□□□□□ -0.78
LINC00458-202ENST00000427299 RHPN1Q8TCX5 695 aa10.19□□□□□ -0.78
LINC00458-202ENST00000427299 NEUROD4Q9HD90 331 aa10.19□□□□□ -0.78
LINC00458-202ENST00000427299 ITGB7P26010 798 aa10.18□□□□□ -0.78
LINC00458-202ENST00000427299 COL9A3Q14050 684 aaPredicted RBP10.18□□□□□ -0.78
LINC00458-202ENST00000427299 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
LINC00458-202ENST00000427299 KRTAP4-8Q9BYQ9 185 aa10.18□□□□□ -0.78
LINC00458-202ENST00000427299 M0R2N6 131 aa10.17□□□□□ -0.78
LINC00458-202ENST00000427299 PRDM6Q9NQX0 595 aa10.17□□□□□ -0.78
LINC00458-202ENST00000427299 STARD13Q9Y3M8 1113 aa10.17□□□□□ -0.78
LINC00458-202ENST00000427299 ATP9BO43861 1147 aa10.16□□□□□ -0.78
LINC00458-202ENST00000427299 SPEM2Q0P670 501 aa10.16□□□□□ -0.78
LINC00458-202ENST00000427299 FLIIQ13045 1269 aa10.16□□□□□ -0.78
LINC00458-202ENST00000427299 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
LINC00458-202ENST00000427299 LARGE2Q8N3Y3 721 aa10.16□□□□□ -0.78
LINC00458-202ENST00000427299 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
LINC00458-202ENST00000427299 KCNQ4P56696 695 aa10.15□□□□□ -0.78
LINC00458-202ENST00000427299 SIX5Q8N196 739 aa10.15□□□□□ -0.78
LINC00458-202ENST00000427299 OGFOD1Q8N543 542 aa10.15□□□□□ -0.78
LINC00458-202ENST00000427299 HSH2DQ96JZ2 352 aa10.15□□□□□ -0.78
LINC00458-202ENST00000427299 PHACTR1Q9C0D0 580 aa10.15□□□□□ -0.78
LINC00458-202ENST00000427299 PALM3A6NDB9 673 aaPredicted RBP10.14□□□□□ -0.79
LINC00458-202ENST00000427299 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 M0R082 166 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 DKK1O94907 266 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 DOC2BQ14184 412 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 ZNF417Q8TAU3 575 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 ZNF587Q96SQ5 575 aaPredicted RBP10.14□□□□□ -0.79
LINC00458-202ENST00000427299 BRD7Q9NPI1 651 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 HCN4Q9Y3Q4 1203 aa10.14□□□□□ -0.79
LINC00458-202ENST00000427299 ALBP02768 609 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 GATA4P43694 442 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 TYRO3Q06418 890 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 RAB44Q7Z6P3 723 aaPredicted RBP10.13□□□□□ -0.79
LINC00458-202ENST00000427299 TSEN2Q8NCE0 465 aaKnown RBP10.13□□□□□ -0.79
LINC00458-202ENST00000427299 ZNF280CQ8ND82 737 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 CEP63Q96MT8 703 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 ANKIB1Q9P2G1 1089 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 MKRN1Q9UHC7 482 aaKnown RBP10.13□□□□□ -0.79
LINC00458-202ENST00000427299 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
LINC00458-202ENST00000427299 C21orf2O43822 256 aa10.12□□□□□ -0.79
LINC00458-202ENST00000427299 ADH7P40394 386 aa10.12□□□□□ -0.79
LINC00458-202ENST00000427299 PRRT3Q5FWE3 981 aa10.12□□□□□ -0.79
LINC00458-202ENST00000427299 MICALL1Q8N3F8 863 aa10.12□□□□□ -0.79
LINC00458-202ENST00000427299 SUSD3Q96L08 255 aa10.12□□□□□ -0.79
LINC00458-202ENST00000427299 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
LINC00458-202ENST00000427299 SEMA6BQ9H3T3 888 aa10.11□□□□□ -0.79
LINC00458-202ENST00000427299 SFI1A8K8P3 1242 aa10.1□□□□□ -0.79
LINC00458-202ENST00000427299 NID1P14543 1247 aa10.1□□□□□ -0.79
LINC00458-202ENST00000427299 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
LINC00458-202ENST00000427299 C8orf86Q6ZUL3 223 aa10.1□□□□□ -0.79
LINC00458-202ENST00000427299 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
LINC00458-202ENST00000427299 KCNH4Q9UQ05 1017 aa10.1□□□□□ -0.79
LINC00458-202ENST00000427299 PPP1R12BO60237 982 aaPredicted RBP10.09□□□□□ -0.79
LINC00458-202ENST00000427299 STAG2Q8N3U4 1231 aa10.09□□□□□ -0.79
LINC00458-202ENST00000427299 FAM229AH3BQW9 127 aa10.08□□□□□ -0.8
LINC00458-202ENST00000427299 ALDH16A1Q8IZ83 802 aa10.08□□□□□ -0.8
LINC00458-202ENST00000427299 RSPO4Q2I0M5 234 aaPredicted RBP10.07□□□□□ -0.8
LINC00458-202ENST00000427299 C2orf49Q9BVC5 232 aaPredicted RBP10.07□□□□□ -0.8
LINC00458-202ENST00000427299 APBA3O96018 575 aa10.06□□□□□ -0.8
LINC00458-202ENST00000427299 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
LINC00458-202ENST00000427299 BTLAQ7Z6A9 289 aa10.06□□□□□ -0.8
LINC00458-202ENST00000427299 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
LINC00458-202ENST00000427299 TPSG1Q9NRR2 321 aa10.06□□□□□ -0.8
LINC00458-202ENST00000427299 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
LINC00458-202ENST00000427299 BHMTQ93088 406 aa10.05□□□□□ -0.8
LINC00458-202ENST00000427299 TRIM28Q13263 835 aaKnown RBP10.04□□□□□ -0.8
LINC00458-202ENST00000427299 FNBP4Q8N3X1 1017 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-202ENST00000427299 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms