RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 C20orf194Q5TEA3 1177 aa22.39■■□□□ 1.17
LIMS2-211ENST00000426981 PXDNLA1KZ92 1463 aa22.38■■□□□ 1.17
LIMS2-211ENST00000426981 POLRMTO00411 1230 aaKnown RBP22.37■■□□□ 1.17
LIMS2-211ENST00000426981 BECN1Q14457 450 aa22.37■■□□□ 1.17
LIMS2-211ENST00000426981 NFIXQ14938 502 aa22.37■■□□□ 1.17
LIMS2-211ENST00000426981 NFKBIBQ15653 356 aa22.37■■□□□ 1.17
LIMS2-211ENST00000426981 TEX13AQ9BXU3 409 aaPredicted RBP22.37■■□□□ 1.17
LIMS2-211ENST00000426981 TBC1D2BQ9UPU7 963 aa22.37■■□□□ 1.17
LIMS2-211ENST00000426981 RRP7AQ9Y3A4 280 aaKnown RBP22.37■■□□□ 1.17
LIMS2-211ENST00000426981 DPEP1P16444 411 aa22.36■■□□□ 1.17
LIMS2-211ENST00000426981 ZNF784Q8NCA9 323 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-211ENST00000426981 AFDNP55196 1824 aaKnown RBP22.35■■□□□ 1.17
LIMS2-211ENST00000426981 SNRPA1P09661 255 aaKnown RBP22.34■■□□□ 1.17
LIMS2-211ENST00000426981 BICDL1Q6ZP65 573 aa22.34■■□□□ 1.17
LIMS2-211ENST00000426981 PNNQ9H307 717 aaKnown RBP22.34■■□□□ 1.17
LIMS2-211ENST00000426981 KDM3BQ7LBC6 1761 aa22.33■■□□□ 1.17
LIMS2-211ENST00000426981 GRIN3BO60391 1043 aa22.33■■□□□ 1.17
LIMS2-211ENST00000426981 TMPOP42166 694 aaKnown RBP22.33■■□□□ 1.17
LIMS2-211ENST00000426981 RIPK4P57078 832 aa22.33■■□□□ 1.17
LIMS2-211ENST00000426981 KCNA3P22001 575 aa22.32■■□□□ 1.16
LIMS2-211ENST00000426981 IL6STP40189 918 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-211ENST00000426981 TGFB2P61812 414 aa22.32■■□□□ 1.16
LIMS2-211ENST00000426981 CCDC27Q2M243 656 aa22.32■■□□□ 1.16
LIMS2-211ENST00000426981 WDR63Q8IWG1 891 aa22.32■■□□□ 1.16
LIMS2-211ENST00000426981 NBPF26B4DH59 902 aa22.31■■□□□ 1.16
LIMS2-211ENST00000426981 APAF1O14727 1248 aa22.31■■□□□ 1.16
LIMS2-211ENST00000426981 CT47B1P0C2W7 299 aaPredicted RBP22.31■■□□□ 1.16
LIMS2-211ENST00000426981 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
LIMS2-211ENST00000426981 TBC1D9BQ66K14 1250 aa22.31■■□□□ 1.16
LIMS2-211ENST00000426981 NBPF10Q6P3W6 841 aaKnown RBP22.31■■□□□ 1.16
LIMS2-211ENST00000426981 NBPF15Q8N660 670 aa22.31■■□□□ 1.16
LIMS2-211ENST00000426981 CHRNA5P30532 468 aa22.31■■□□□ 1.16
LIMS2-211ENST00000426981 A0A087WZG4 1122 aa22.3■■□□□ 1.16
LIMS2-211ENST00000426981 EIF4A1P60842 406 aaKnown RBP22.3■■□□□ 1.16
LIMS2-211ENST00000426981 CLUAP1Q96AJ1 413 aa22.3■■□□□ 1.16
LIMS2-211ENST00000426981 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
LIMS2-211ENST00000426981 BRCA1P38398 1863 aaKnown RBP22.29■■□□□ 1.16
LIMS2-211ENST00000426981 SCN7AQ01118 1682 aa22.29■■□□□ 1.16
LIMS2-211ENST00000426981 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
LIMS2-211ENST00000426981 SERPINB2P05120 415 aa22.29■■□□□ 1.16
LIMS2-211ENST00000426981 CCDC24Q8N4L8 307 aa22.29■■□□□ 1.16
LIMS2-211ENST00000426981 RUNDC1Q96C34 613 aa22.29■■□□□ 1.16
LIMS2-211ENST00000426981 NRXN2Q9P2S2 1712 aa22.28■■□□□ 1.16
LIMS2-211ENST00000426981 UPF2Q9HAU5 1272 aaKnown RBP22.28■■□□□ 1.16
LIMS2-211ENST00000426981 CARMIL3Q8ND23 1372 aa22.28■■□□□ 1.16
LIMS2-211ENST00000426981 GIGYF1O75420 1035 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-211ENST00000426981 DZIP3Q86Y13 1208 aaKnown RBP22.27■■□□□ 1.16
LIMS2-211ENST00000426981 TSPYL4Q9UJ04 414 aa22.25■■□□□ 1.15
LIMS2-211ENST00000426981 TRIM35Q9UPQ4 493 aa22.25■■□□□ 1.15
LIMS2-211ENST00000426981 LAMB4A4D0S4 1761 aa22.25■■□□□ 1.15
LIMS2-211ENST00000426981 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
LIMS2-211ENST00000426981 WWC1Q8IX03 1113 aa22.24■■□□□ 1.15
LIMS2-211ENST00000426981 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
LIMS2-211ENST00000426981 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
LIMS2-211ENST00000426981 ANKRD31Q8N7Z5 1873 aa22.21■■□□□ 1.15
LIMS2-211ENST00000426981 RGS3P49796 1198 aa22.21■■□□□ 1.15
LIMS2-211ENST00000426981 HLFQ16534 295 aa22.21■■□□□ 1.15
LIMS2-211ENST00000426981 KRT24Q2M2I5 525 aa22.21■■□□□ 1.15
LIMS2-211ENST00000426981 PRR5LQ6MZQ0 368 aa22.2■■□□□ 1.14
LIMS2-211ENST00000426981 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
LIMS2-211ENST00000426981 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
LIMS2-211ENST00000426981 MYL6BP14649 208 aa22.19■■□□□ 1.14
LIMS2-211ENST00000426981 LMOD3Q0VAK6 560 aa22.19■■□□□ 1.14
LIMS2-211ENST00000426981 SETDB2Q96T68 719 aa22.19■■□□□ 1.14
LIMS2-211ENST00000426981 ARFGEF1Q9Y6D6 1849 aa22.18■■□□□ 1.14
LIMS2-211ENST00000426981 BCAR3O75815 825 aa22.18■■□□□ 1.14
LIMS2-211ENST00000426981 DALRD3Q5D0E6 543 aaKnown RBP22.18■■□□□ 1.14
LIMS2-211ENST00000426981 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
LIMS2-211ENST00000426981 EIF2S2P20042 333 aaKnown RBP22.17■■□□□ 1.14
LIMS2-211ENST00000426981 C2CD5Q86YS7 1000 aa22.17■■□□□ 1.14
LIMS2-211ENST00000426981 NECTIN2Q92692 538 aa22.17■■□□□ 1.14
LIMS2-211ENST00000426981 ATP10DQ9P241 1426 aa22.17■■□□□ 1.14
LIMS2-211ENST00000426981 ANXA1P04083 346 aa22.16■■□□□ 1.14
LIMS2-211ENST00000426981 ADCY9O60503 1353 aa22.16■■□□□ 1.14
LIMS2-211ENST00000426981 FAM177BA6PVY3 158 aa22.15■■□□□ 1.14
LIMS2-211ENST00000426981 CHL1O00533 1208 aa22.15■■□□□ 1.14
LIMS2-211ENST00000426981 RARSP54136 660 aaKnown RBP22.15■■□□□ 1.14
LIMS2-211ENST00000426981 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
LIMS2-211ENST00000426981 L1TD1Q5T7N2 865 aaKnown RBP22.15■■□□□ 1.14
LIMS2-211ENST00000426981 ZNF526Q8TF50 670 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-211ENST00000426981 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-211ENST00000426981 DLEC1Q9Y238 1755 aa22.15■■□□□ 1.14
LIMS2-211ENST00000426981 COL11A2P13942 1736 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-211ENST00000426981 PDIA6Q15084 440 aa22.14■■□□□ 1.13
LIMS2-211ENST00000426981 CLEC4GQ6UXB4 293 aa22.14■■□□□ 1.13
LIMS2-211ENST00000426981 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-211ENST00000426981 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.13
LIMS2-211ENST00000426981 IGHDP01880 384 aa22.13■■□□□ 1.13
LIMS2-211ENST00000426981 LRP10Q7Z4F1 713 aa22.13■■□□□ 1.13
LIMS2-211ENST00000426981 CNBD1Q8NA66 436 aa22.13■■□□□ 1.13
LIMS2-211ENST00000426981 BABAM1Q9NWV8 329 aa22.13■■□□□ 1.13
LIMS2-211ENST00000426981 NUP98P52948 1817 aa22.12■■□□□ 1.13
LIMS2-211ENST00000426981 H0YIN7 160 aa22.12■■□□□ 1.13
LIMS2-211ENST00000426981 BRIP1Q9BX63 1249 aa22.12■■□□□ 1.13
LIMS2-211ENST00000426981 ZBTB3Q9H5J0 574 aa22.12■■□□□ 1.13
LIMS2-211ENST00000426981 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
LIMS2-211ENST00000426981 NPHP1O15259 732 aa22.11■■□□□ 1.13
LIMS2-211ENST00000426981 NBPF5PQ86XG9 351 aaPredicted RBP22.11■■□□□ 1.13
LIMS2-211ENST00000426981 ZNF622Q969S3 477 aaKnown RBP eCLIP22.11■■□□□ 1.13
LIMS2-211ENST00000426981 MAP3K15Q6ZN16 1313 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms