RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 NDUFB5O43674 189 aa10.5□□□□□ -0.73
HMGB1P32-201ENST00000425971 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P32-201ENST00000425971 COL19A1Q14993 1142 aa10.5□□□□□ -0.73
HMGB1P32-201ENST00000425971 C11orf91Q3C1V1 193 aa10.5□□□□□ -0.73
HMGB1P32-201ENST00000425971 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 ZBTB39O15060 712 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 TXLNAP40222 546 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 CTSOP43234 321 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 PLA2G4AP47712 749 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 DGKZQ13574 1117 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 TMC7Q7Z402 723 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 ETFBKMTQ8IXQ9 262 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 GIPC2Q8TF65 315 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 CITED4Q96RK1 184 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 POLMQ9NP87 494 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 CCDC87Q9NVE4 849 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 BRPF3Q9ULD4 1205 aa10.49□□□□□ -0.73
HMGB1P32-201ENST00000425971 Q6ZNB5 142 aa10.48□□□□□ -0.73
HMGB1P32-201ENST00000425971 C7orf43Q8WVR3 580 aa10.48□□□□□ -0.73
HMGB1P32-201ENST00000425971 KLK14Q9P0G3 267 aa10.48□□□□□ -0.73
HMGB1P32-201ENST00000425971 IGHA2P01877 340 aa10.47□□□□□ -0.73
HMGB1P32-201ENST00000425971 FAM129BQ96TA1 746 aa10.47□□□□□ -0.73
HMGB1P32-201ENST00000425971 ZDHHC3Q9NYG2 299 aa10.47□□□□□ -0.73
HMGB1P32-201ENST00000425971 TREHO43280 583 aa10.46□□□□□ -0.73
HMGB1P32-201ENST00000425971 UPP2O95045 317 aa10.46□□□□□ -0.73
HMGB1P32-201ENST00000425971 AVPP01185 164 aa10.46□□□□□ -0.73
HMGB1P32-201ENST00000425971 CYB5RLQ6IPT4 315 aa10.46□□□□□ -0.73
HMGB1P32-201ENST00000425971 RNF217Q8TC41 542 aa10.46□□□□□ -0.73
HMGB1P32-201ENST00000425971 IFT43Q96FT9 208 aa10.46□□□□□ -0.73
HMGB1P32-201ENST00000425971 LAMC3Q9Y6N6 1575 aa10.46□□□□□ -0.74
HMGB1P32-201ENST00000425971 MRPL14Q6P1L8 145 aaKnown RBP10.45□□□□□ -0.74
HMGB1P32-201ENST00000425971 ATCAYQ86WG3 371 aa10.45□□□□□ -0.74
HMGB1P32-201ENST00000425971 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P32-201ENST00000425971 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
HMGB1P32-201ENST00000425971 ATAD2BQ9ULI0 1458 aa10.44□□□□□ -0.74
HMGB1P32-201ENST00000425971 FMR1Q06787 632 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGB1P32-201ENST00000425971 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
HMGB1P32-201ENST00000425971 GPC6Q9Y625 555 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P32-201ENST00000425971 BMP2P12643 396 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 ZAP70P43403 619 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 DSC3Q14574 896 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 WDR44Q5JSH3 913 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 C6orf118Q5T5N4 469 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 NBPF10Q6P3W6 841 aaKnown RBP10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 GJD3Q8N144 294 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 MRRFQ96E11 262 aaKnown RBP10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 WDR62O43379 1518 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
HMGB1P32-201ENST00000425971 FAM187AA6NFU0 413 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 P4HBP07237 508 aaKnown RBP10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 ATP4AP20648 1035 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 MZF1P28698 734 aaPredicted RBP10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 PHKA2P46019 1235 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 TAGLNQ01995 201 aaKnown RBP10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 POU4F2Q12837 409 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 AAMPQ13685 434 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 HIF1AQ16665 826 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 RHPN1Q8TCX5 695 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 KLRG1Q96E93 195 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 DMRTB1Q96MA1 342 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
HMGB1P32-201ENST00000425971 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 GPR182O15218 404 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 PDGFAP04085 211 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 IER5Q5VY09 327 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 LYSMD3Q7Z3D4 306 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 PRICKLE2Q7Z3G6 844 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 TREML1Q86YW5 311 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 ALKBH8Q96BT7 664 aaKnown RBP10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
HMGB1P32-201ENST00000425971 TATP17735 454 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P32-201ENST00000425971 SMCPP49901 116 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P32-201ENST00000425971 EAPPQ56P03 285 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P32-201ENST00000425971 TRIM46Q7Z4K8 759 aa10.4□□□□□ -0.74
HMGB1P32-201ENST00000425971 EDEM1Q92611 657 aa10.4□□□□□ -0.74
HMGB1P32-201ENST00000425971 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P32-201ENST00000425971 TTLL8A6PVC2 850 aa10.39□□□□□ -0.75
HMGB1P32-201ENST00000425971 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
HMGB1P32-201ENST00000425971 SUSD3Q96L08 255 aa10.39□□□□□ -0.75
HMGB1P32-201ENST00000425971 IGSF5Q9NSI5 407 aa10.39□□□□□ -0.75
HMGB1P32-201ENST00000425971 DMGDHQ9UI17 866 aaKnown RBP10.39□□□□□ -0.75
HMGB1P32-201ENST00000425971 MICAL2O94851 1124 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 BMP1P13497 986 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 USP5P45974 858 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 DNM1Q05193 864 aaKnown RBP10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 EHHADHQ08426 723 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 CTC1Q2NKJ3 1217 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 TMC1Q8TDI8 760 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 HSH2DQ96JZ2 352 aa10.38□□□□□ -0.75
HMGB1P32-201ENST00000425971 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
HMGB1P32-201ENST00000425971 A0A1B0GTH6 734 aa10.37□□□□□ -0.75
HMGB1P32-201ENST00000425971 VAMP1P23763 118 aa10.37□□□□□ -0.75
HMGB1P32-201ENST00000425971 SCARF1Q14162 830 aa10.37□□□□□ -0.75
HMGB1P32-201ENST00000425971 PKDCCQ504Y2 493 aa10.37□□□□□ -0.75
HMGB1P32-201ENST00000425971 ZIC5Q96T25 663 aa10.37□□□□□ -0.75
HMGB1P32-201ENST00000425971 RHOQP17081 205 aa10.36□□□□□ -0.75
HMGB1P32-201ENST00000425971 PLCB3Q01970 1234 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms