RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PEAK1Q9H792 1746 aa9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 RUFY2Q8WXA3 655 aa9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 RBM33Q96EV2 1170 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 SETD1AO15047 1707 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 AGLP35573 1532 aa9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 UVSSAQ2YD98 709 aa9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 CYP46A1Q9Y6A2 500 aa9.02□□□□□ -0.97
SMARCC1-202ENST00000425518 NOLC1Q14978 699 aaKnown RBP eCLIP9.01□□□□□ -0.972e-10■■■■■ 52.1
SMARCC1-202ENST00000425518 SPC24Q8NBT2 197 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 TCEANC2Q96MN5 208 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 HYPKQ9NX55 129 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 BTBD11A6QL63 1104 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 DYNC1I1O14576 645 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 LETM1O95202 739 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 FAM173BQ6P4H8 233 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 NRKQ7Z2Y5 1582 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 AACSQ86V21 672 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 RIMS1Q86UR5 1692 aaKnown RBP9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 EPB41L2O43491 1005 aaKnown RBP9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 ZKSCAN1P17029 563 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 NBPF6Q5VWK0 638 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 NBPF4Q96M43 638 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 ECHDC1Q9NTX5 307 aa9.01□□□□□ -0.97
SMARCC1-202ENST00000425518 FAM177BA6PVY3 158 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 KDM4AO75164 1064 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 AIMP1Q12904 312 aaKnown RBP9□□□□□ -0.97
SMARCC1-202ENST00000425518 CWF19L2Q2TBE0 894 aaKnown RBP9□□□□□ -0.97
SMARCC1-202ENST00000425518 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
SMARCC1-202ENST00000425518 IL17RAQ96F46 866 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 MTMR6Q9Y217 621 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 MAP3K2Q9Y2U5 619 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 ITSN1Q15811 1721 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 CAMK4Q16566 473 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 ZNF530Q6P9A1 599 aaPredicted RBP9□□□□□ -0.97
SMARCC1-202ENST00000425518 TMEM87AQ8NBN3 555 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 GPATCH3Q96I76 525 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 MAP7D2Q96T17 732 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 ME3Q16798 604 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 LRRC59Q96AG4 307 aaKnown RBP9□□□□□ -0.97
SMARCC1-202ENST00000425518 FAM227BQ96M60 508 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 SIL1Q9H173 461 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
SMARCC1-202ENST00000425518 PLEKHG1Q9ULL1 1385 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 VPS53Q5VIR6 699 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 PIBF1Q8WXW3 757 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 BOLA2Q9H3K6 86 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 RBM8AQ9Y5S9 174 aaKnown RBP8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 AKAP12Q02952 1782 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 KCNA6P17658 529 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 STK3Q13188 491 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 PROSER3Q2NL68 480 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 ZSCAN31Q96LW9 406 aaPredicted RBP8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 TBX22Q9Y458 520 aa8.99□□□□□ -0.97
SMARCC1-202ENST00000425518 TTC41PQ6P2S7 1318 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 GOLGA6L4A6NEF3 574 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 G3BP1Q13283 466 aaKnown RBP eCLIP8.98□□□□□ -0.978e-7■■■□□ 14.9
SMARCC1-202ENST00000425518 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 PRAMEF22A3QJZ6 481 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 CREB3L3Q68CJ9 461 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 DBF4Q9UBU7 674 aaPredicted RBP8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 TPCN1Q9ULQ1 816 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 NMIQ13287 307 aaPredicted RBP8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 CKAP2LQ8IYA6 745 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 EVI5LQ96CN4 794 aa8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 SH2B1Q9NRF2 756 aaPredicted RBP8.98□□□□□ -0.97
SMARCC1-202ENST00000425518 AP5Z1O43299 807 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 FSD1Q9BTV5 496 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 CCDC171Q6TFL3 1326 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 CCDC192P0DO97 292 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 NECTIN1Q15223 517 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 MYRIPQ8NFW9 859 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 KLHDC4Q8TBB5 520 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 EAF2Q96CJ1 260 aaPredicted RBP8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 KRT85P78386 507 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 ST3GAL1Q11201 340 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 CDC37L1Q7L3B6 337 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 TTC6Q86TZ1 520 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 IP6K1Q92551 441 aa8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.97□□□□□ -0.97
SMARCC1-202ENST00000425518 LIG1P18858 919 aa8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 PSME1Q06323 249 aa8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 PLEKHO1Q53GL0 409 aaPredicted RBP8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 C1orf141Q5JVX7 400 aa8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 BLOC1S2Q6QNY1 142 aa8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 DRC7Q8IY82 874 aa8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 TLR7Q9NYK1 1049 aaKnown RBP8.96□□□□□ -0.97
SMARCC1-202ENST00000425518 ADCY9O60503 1353 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 KSR2Q6VAB6 950 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 PHF8Q9UPP1 1060 aa8.96□□□□□ -0.98
SMARCC1-202ENST00000425518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms