RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 KIF6Q6ZMV9 814 aa27.91■■■□□ 2.06
SEC22C-207ENST00000423701 XAGE3Q8WTP9 111 aa27.91■■■□□ 2.06
SEC22C-207ENST00000423701 HYPKQ9NX55 129 aa27.91■■■□□ 2.06
SEC22C-207ENST00000423701 PPP1R1BQ9UD71 204 aaPredicted RBP27.91■■■□□ 2.06
SEC22C-207ENST00000423701 COPS6Q7L5N1 327 aa27.9■■■□□ 2.06
SEC22C-207ENST00000423701 TCERG1O14776 1098 aaKnown RBP27.89■■■□□ 2.06
SEC22C-207ENST00000423701 AIMP1Q12904 312 aaKnown RBP27.89■■■□□ 2.06
SEC22C-207ENST00000423701 NFIXQ14938 502 aa27.89■■■□□ 2.06
SEC22C-207ENST00000423701 ERVV-1B6SEH8 477 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 RGL2O15211 777 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 TM4SF1P30408 202 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 DDR1Q08345 913 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 TBC1D9BQ66K14 1250 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 STK31Q9BXU1 1019 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 ZBTB3Q9H5J0 574 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 ZNF652Q9Y2D9 606 aa27.89■■■□□ 2.05
SEC22C-207ENST00000423701 HLFQ16534 295 aa27.88■■■□□ 2.05
SEC22C-207ENST00000423701 CLEC4GQ6UXB4 293 aa27.88■■■□□ 2.05
SEC22C-207ENST00000423701 NUP98P52948 1817 aa27.87■■■□□ 2.05
SEC22C-207ENST00000423701 PHAXQ9H814 394 aaKnown RBP27.87■■■□□ 2.05
SEC22C-207ENST00000423701 BICDL1Q6ZP65 573 aa27.86■■■□□ 2.05
SEC22C-207ENST00000423701 POLRMTO00411 1230 aaKnown RBP27.85■■■□□ 2.05
SEC22C-207ENST00000423701 PARP3Q9Y6F1 533 aa27.85■■■□□ 2.05
SEC22C-207ENST00000423701 NRXN2Q9P2S2 1712 aa27.84■■■□□ 2.05
SEC22C-207ENST00000423701 ATP10DQ9P241 1426 aa27.84■■■□□ 2.05
SEC22C-207ENST00000423701 AFDNP55196 1824 aaKnown RBP27.83■■■□□ 2.05
SEC22C-207ENST00000423701 SLC4A2P04920 1241 aa27.83■■■□□ 2.04
SEC22C-207ENST00000423701 GIGYF2Q6Y7W6 1299 aaKnown RBP27.83■■■□□ 2.04
SEC22C-207ENST00000423701 FHDC1Q9C0D6 1143 aaPredicted RBP27.83■■■□□ 2.04
SEC22C-207ENST00000423701 CARMIL3Q8ND23 1372 aa27.82■■■□□ 2.04
SEC22C-207ENST00000423701 ARFGEF2Q9Y6D5 1785 aa27.82■■■□□ 2.04
SEC22C-207ENST00000423701 ANKRD36CQ5JPF3 1778 aa27.81■■■□□ 2.04
SEC22C-207ENST00000423701 PLBD2Q8NHP8 589 aa27.81■■■□□ 2.04
SEC22C-207ENST00000423701 SETDB2Q96T68 719 aa27.81■■■□□ 2.04
SEC22C-207ENST00000423701 CACNA1FO60840 1977 aa27.81■■■□□ 2.04
SEC22C-207ENST00000423701 ANKRD13DQ6ZTN6 518 aa27.8■■■□□ 2.04
SEC22C-207ENST00000423701 KLHL34Q8N239 644 aa27.8■■■□□ 2.04
SEC22C-207ENST00000423701 NIP7Q9Y221 180 aaKnown RBP eCLIP27.8■■■□□ 2.04
SEC22C-207ENST00000423701 C10orf71Q711Q0 1435 aa27.8■■■□□ 2.04
SEC22C-207ENST00000423701 SERPINB2P05120 415 aa27.79■■■□□ 2.04
SEC22C-207ENST00000423701 G2E3Q7L622 706 aa27.79■■■□□ 2.04
SEC22C-207ENST00000423701 KIF13BQ9NQT8 1826 aa27.79■■■□□ 2.04
SEC22C-207ENST00000423701 CT47B1P0C2W7 299 aaPredicted RBP27.77■■■□□ 2.04
SEC22C-207ENST00000423701 UBN2Q6ZU65 1347 aa27.77■■■□□ 2.04
SEC22C-207ENST00000423701 FLIIQ13045 1269 aa27.76■■■□□ 2.04
SEC22C-207ENST00000423701 ZNF428Q96B54 188 aa27.76■■■□□ 2.04
SEC22C-207ENST00000423701 DDX58O95786 925 aaKnown RBP27.76■■■□□ 2.03
SEC22C-207ENST00000423701 GPTP24298 496 aa27.76■■■□□ 2.03
SEC22C-207ENST00000423701 ZNF34Q8IZ26 560 aa27.76■■■□□ 2.03
SEC22C-207ENST00000423701 SYT17Q9BSW7 474 aa27.76■■■□□ 2.03
SEC22C-207ENST00000423701 HSP90AB3PQ58FF7 597 aa27.75■■■□□ 2.03
SEC22C-207ENST00000423701 RIC3Q7Z5B4 369 aa27.75■■■□□ 2.03
SEC22C-207ENST00000423701 CD2APQ9Y5K6 639 aa27.75■■■□□ 2.03
SEC22C-207ENST00000423701 TCIRG1Q13488 830 aa27.74■■■□□ 2.03
SEC22C-207ENST00000423701 SSH1Q8WYL5 1049 aa27.74■■■□□ 2.03
SEC22C-207ENST00000423701 ADCY9O60503 1353 aa27.73■■■□□ 2.03
SEC22C-207ENST00000423701 PRR5LQ6MZQ0 368 aa27.72■■■□□ 2.03
SEC22C-207ENST00000423701 NBPF5PQ86XG9 351 aaPredicted RBP27.72■■■□□ 2.03
SEC22C-207ENST00000423701 CNBD1Q8NA66 436 aa27.72■■■□□ 2.03
SEC22C-207ENST00000423701 KIAA1551Q9HCM1 1747 aa27.72■■■□□ 2.03
SEC22C-207ENST00000423701 PI4KAP2A4QPH2 592 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 FAM177BA6PVY3 158 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 FKBP5Q13451 457 aaPredicted RBP27.71■■■□□ 2.03
SEC22C-207ENST00000423701 ALDH1L2Q3SY69 923 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 KSR2Q6VAB6 950 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 PI4KAP1Q8N8J0 262 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 NLGN2Q8NFZ4 835 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 BCL2L13Q9BXK5 485 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 MAP3K2Q9Y2U5 619 aa27.71■■■□□ 2.03
SEC22C-207ENST00000423701 MRPL50Q8N5N7 158 aaKnown RBP27.7■■■□□ 2.03
SEC22C-207ENST00000423701 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.03
SEC22C-207ENST00000423701 IBTKQ9P2D0 1353 aaPredicted RBP27.7■■■□□ 2.03
SEC22C-207ENST00000423701 PARP10Q53GL7 1025 aa27.7■■■□□ 2.02
SEC22C-207ENST00000423701 SUSD4Q5VX71 490 aa27.7■■■□□ 2.02
SEC22C-207ENST00000423701 ANKRD31Q8N7Z5 1873 aa27.69■■■□□ 2.02
SEC22C-207ENST00000423701 NPHP1O15259 732 aa27.69■■■□□ 2.02
SEC22C-207ENST00000423701 CCDC24Q8N4L8 307 aa27.69■■■□□ 2.02
SEC22C-207ENST00000423701 ISCA1Q9BUE6 129 aa27.69■■■□□ 2.02
SEC22C-207ENST00000423701 SMC4Q9NTJ3 1288 aa27.69■■■□□ 2.02
SEC22C-207ENST00000423701 PXDNLA1KZ92 1463 aa27.68■■■□□ 2.02
SEC22C-207ENST00000423701 ATP5J2-PTCD1G3V325 749 aa27.68■■■□□ 2.02
SEC22C-207ENST00000423701 TPTE2Q6XPS3 522 aa27.68■■■□□ 2.02
SEC22C-207ENST00000423701 NLRP10Q86W26 655 aa27.68■■■□□ 2.02
SEC22C-207ENST00000423701 METTL22Q9BUU2 404 aaPredicted RBP27.68■■■□□ 2.02
SEC22C-207ENST00000423701 NTSR2O95665 410 aa27.67■■■□□ 2.02
SEC22C-207ENST00000423701 MYD88Q99836 296 aa27.67■■■□□ 2.02
SEC22C-207ENST00000423701 NYXQ9GZU5 481 aa27.67■■■□□ 2.02
SEC22C-207ENST00000423701 N4BP2Q86UW6 1770 aaPredicted RBP27.66■■■□□ 2.02
SEC22C-207ENST00000423701 RARSP54136 660 aaKnown RBP27.66■■■□□ 2.02
SEC22C-207ENST00000423701 ST5P78524 1137 aa27.66■■■□□ 2.02
SEC22C-207ENST00000423701 PPP1R42Q7Z4L9 355 aa27.65■■■□□ 2.02
SEC22C-207ENST00000423701 ABCC12Q96J65 1359 aa27.65■■■□□ 2.02
SEC22C-207ENST00000423701 TGFB2P61812 414 aa27.64■■■□□ 2.02
SEC22C-207ENST00000423701 NUTM1Q86Y26 1132 aa27.64■■■□□ 2.02
SEC22C-207ENST00000423701 TRIM28Q13263 835 aaKnown RBP27.64■■■□□ 2.01
SEC22C-207ENST00000423701 DNAAF4Q8WXU2 420 aa27.64■■■□□ 2.01
SEC22C-207ENST00000423701 UTP14AQ9BVJ6 771 aaKnown RBP27.64■■■□□ 2.01
SEC22C-207ENST00000423701 BRIP1Q9BX63 1249 aa27.64■■■□□ 2.01
SEC22C-207ENST00000423701 TNRC6CQ9HCJ0 1690 aaKnown RBP27.63■■■□□ 2.01
SEC22C-207ENST00000423701 F6X3S4 739 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms