RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZNF219Q9P2Y4 722 aaPredicted RBP21.47■■□□□ 1.03
COL18A1-205ENST00000423214 NFKBIEO00221 500 aa21.46■■□□□ 1.03
COL18A1-205ENST00000423214 HTATSF1O43719 755 aaKnown RBP21.46■■□□□ 1.03
COL18A1-205ENST00000423214 DCTN1Q14203 1278 aa21.46■■□□□ 1.03
COL18A1-205ENST00000423214 PRAMEF22A3QJZ6 481 aa21.45■■□□□ 1.02
COL18A1-205ENST00000423214 GLTPD2A6NH11 291 aa21.44■■□□□ 1.02
COL18A1-205ENST00000423214 C21orf2O43822 256 aa21.44■■□□□ 1.02
COL18A1-205ENST00000423214 PRELPP51888 382 aa21.44■■□□□ 1.02
COL18A1-205ENST00000423214 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
COL18A1-205ENST00000423214 NBPF5PQ86XG9 351 aaPredicted RBP21.43■■□□□ 1.02
COL18A1-205ENST00000423214 SMC1BQ8NDV3 1235 aa21.43■■□□□ 1.02
COL18A1-205ENST00000423214 CNKSR1Q969H4 720 aa21.43■■□□□ 1.02
COL18A1-205ENST00000423214 TAF7Q15545 349 aaPredicted RBP21.42■■□□□ 1.02
COL18A1-205ENST00000423214 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
COL18A1-205ENST00000423214 IFFO2Q5TF58 517 aa21.41■■□□□ 1.02
COL18A1-205ENST00000423214 SRGNP10124 158 aa21.4■■□□□ 1.02
COL18A1-205ENST00000423214 VEGFAP15692 232 aaPredicted RBP21.4■■□□□ 1.02
COL18A1-205ENST00000423214 SOGA3Q5TF21 947 aa21.4■■□□□ 1.02
COL18A1-205ENST00000423214 PRPF40BQ6NWY9 871 aaKnown RBP21.4■■□□□ 1.02
COL18A1-205ENST00000423214 MASTLQ96GX5 879 aa21.4■■□□□ 1.02
COL18A1-205ENST00000423214 TAOK3Q9H2K8 898 aa21.4■■□□□ 1.02
COL18A1-205ENST00000423214 LTBP3Q9NS15 1303 aa21.39■■□□□ 1.01
COL18A1-205ENST00000423214 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
COL18A1-205ENST00000423214 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
COL18A1-205ENST00000423214 DPY19L2Q6NUT2 758 aa21.39■■□□□ 1.01
COL18A1-205ENST00000423214 NIP7Q9Y221 180 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL18A1-205ENST00000423214 SCN4AP35499 1836 aa21.39■■□□□ 1.01
COL18A1-205ENST00000423214 PNISRQ8TF01 805 aaKnown RBP21.38■■□□□ 1.01
COL18A1-205ENST00000423214 NBPF26B4DH59 902 aa21.37■■□□□ 1.01
COL18A1-205ENST00000423214 RGL2O15211 777 aa21.37■■□□□ 1.01
COL18A1-205ENST00000423214 HTRA3P83110 453 aa21.37■■□□□ 1.01
COL18A1-205ENST00000423214 NBPF10Q6P3W6 841 aaKnown RBP21.37■■□□□ 1.01
COL18A1-205ENST00000423214 NBPF15Q8N660 670 aa21.37■■□□□ 1.01
COL18A1-205ENST00000423214 DNAJC5GQ8N7S2 189 aa21.37■■□□□ 1.01
COL18A1-205ENST00000423214 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
COL18A1-205ENST00000423214 ANKRD36CQ5JPF3 1778 aa21.36■■□□□ 1.01
COL18A1-205ENST00000423214 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
COL18A1-205ENST00000423214 FAM177BA6PVY3 158 aa21.35■■□□□ 1.01
COL18A1-205ENST00000423214 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
COL18A1-205ENST00000423214 TPTE2Q6XPS3 522 aa21.35■■□□□ 1.01
COL18A1-205ENST00000423214 KLRG1Q96E93 195 aa21.35■■□□□ 1.01
COL18A1-205ENST00000423214 NPR1P16066 1061 aa21.34■■□□□ 1.01
COL18A1-205ENST00000423214 CCDC93Q567U6 631 aa21.34■■□□□ 1.01
COL18A1-205ENST00000423214 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
COL18A1-205ENST00000423214 PLEKHF1Q96S99 279 aa21.33■■□□□ 1.01
COL18A1-205ENST00000423214 KIF6Q6ZMV9 814 aa21.32■■□□□ 1
COL18A1-205ENST00000423214 NGEFQ8N5V2 710 aa21.32■■□□□ 1
COL18A1-205ENST00000423214 HLFQ16534 295 aa21.31■■□□□ 1
COL18A1-205ENST00000423214 THUMPD2Q9BTF0 503 aaKnown RBP21.31■■□□□ 1
COL18A1-205ENST00000423214 NYXQ9GZU5 481 aa21.31■■□□□ 1
COL18A1-205ENST00000423214 RRP7AQ9Y3A4 280 aaKnown RBP21.3■■□□□ 1
COL18A1-205ENST00000423214 MAP3K15Q6ZN16 1313 aa21.29■■□□□ 1
COL18A1-205ENST00000423214 ABCC12Q96J65 1359 aa21.29■■□□□ 1
COL18A1-205ENST00000423214 MYL6BP14649 208 aa21.29■■□□□ 1
COL18A1-205ENST00000423214 EIF4A1P60842 406 aaKnown RBP21.29■■□□□ 1
COL18A1-205ENST00000423214 LAMB2P55268 1798 aa21.28■■□□□ 1
COL18A1-205ENST00000423214 KLRG2A4D1S0 409 aaPredicted RBP21.28■■□□□ 1
COL18A1-205ENST00000423214 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
COL18A1-205ENST00000423214 IBTKQ9P2D0 1353 aaPredicted RBP21.27■■□□□ 1
COL18A1-205ENST00000423214 POTECB2RU33 542 aa21.27■■□□□ 1
COL18A1-205ENST00000423214 ERVV-1B6SEH8 477 aa21.27■■□□□ 1
COL18A1-205ENST00000423214 DDNO94850 711 aaPredicted RBP21.27■■□□□ 1
COL18A1-205ENST00000423214 JMYQ8N9B5 988 aa21.27■■□□□ 1
COL18A1-205ENST00000423214 RIC1Q4ADV7 1423 aa21.27■■□□□ 1
COL18A1-205ENST00000423214 ALDH1B1P30837 517 aa21.26■□□□□ 0.99
COL18A1-205ENST00000423214 C7orf43Q8WVR3 580 aa21.26■□□□□ 0.99
COL18A1-205ENST00000423214 ZBTB3Q9H5J0 574 aa21.26■□□□□ 0.99
COL18A1-205ENST00000423214 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
COL18A1-205ENST00000423214 ERBB4Q15303 1308 aa21.26■□□□□ 0.99
COL18A1-205ENST00000423214 PCNTO95613 3336 aa21.26■□□□□ 0.99
COL18A1-205ENST00000423214 IQCA1LA6NCM1 817 aa21.25■□□□□ 0.99
COL18A1-205ENST00000423214 TTLL7Q6ZT98 887 aa21.25■□□□□ 0.99
COL18A1-205ENST00000423214 NUTM1Q86Y26 1132 aa21.25■□□□□ 0.99
COL18A1-205ENST00000423214 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
COL18A1-205ENST00000423214 ZNF277Q9NRM2 450 aaPredicted RBP21.25■□□□□ 0.99
COL18A1-205ENST00000423214 GPTP24298 496 aa21.24■□□□□ 0.99
COL18A1-205ENST00000423214 RALBP1Q15311 655 aa21.24■□□□□ 0.99
COL18A1-205ENST00000423214 LMOD3Q0VAK6 560 aa21.23■□□□□ 0.99
COL18A1-205ENST00000423214 CHADLQ6NUI6 762 aa21.23■□□□□ 0.99
COL18A1-205ENST00000423214 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
COL18A1-205ENST00000423214 RPGRQ92834 1020 aaKnown RBP21.23■□□□□ 0.99
COL18A1-205ENST00000423214 UBN2Q6ZU65 1347 aa21.23■□□□□ 0.99
COL18A1-205ENST00000423214 RIPK4P57078 832 aa21.22■□□□□ 0.99
COL18A1-205ENST00000423214 ADAMTSL1Q8N6G6 1762 aa21.22■□□□□ 0.99
COL18A1-205ENST00000423214 IARSP41252 1262 aaKnown RBP21.21■□□□□ 0.99
COL18A1-205ENST00000423214 CRY2Q49AN0 593 aa21.21■□□□□ 0.99
COL18A1-205ENST00000423214 L3MBTL3Q96JM7 780 aaPredicted RBP21.21■□□□□ 0.99
COL18A1-205ENST00000423214 ZNF541Q9H0D2 1346 aa21.21■□□□□ 0.99
COL18A1-205ENST00000423214 POTEIP0CG38 1075 aa21.2■□□□□ 0.98
COL18A1-205ENST00000423214 POTEJP0CG39 1038 aa21.2■□□□□ 0.98
COL18A1-205ENST00000423214 GIGYF2Q6Y7W6 1299 aaKnown RBP21.2■□□□□ 0.98
COL18A1-205ENST00000423214 SNED1Q8TER0 1413 aa21.2■□□□□ 0.98
COL18A1-205ENST00000423214 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
COL18A1-205ENST00000423214 PPP1R42Q7Z4L9 355 aa21.19■□□□□ 0.98
COL18A1-205ENST00000423214 SYNE4Q8N205 404 aa21.19■□□□□ 0.98
COL18A1-205ENST00000423214 MYBBP1AQ9BQG0 1328 aaKnown RBP21.19■□□□□ 0.98
COL18A1-205ENST00000423214 PARP10Q53GL7 1025 aa21.18■□□□□ 0.98
COL18A1-205ENST00000423214 SUSD4Q5VX71 490 aa21.18■□□□□ 0.98
COL18A1-205ENST00000423214 LDHDQ86WU2 507 aa21.18■□□□□ 0.98
COL18A1-205ENST00000423214 PSMD1Q99460 953 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms