RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 TEX13AQ9BXU3 409 aaPredicted RBP13.81□□□□□ -0.2
RFC1-203ENST00000418436 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
RFC1-203ENST00000418436 MIS18AQ9NYP9 233 aa13.81□□□□□ -0.2
RFC1-203ENST00000418436 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
RFC1-203ENST00000418436 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
RFC1-203ENST00000418436 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
RFC1-203ENST00000418436 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
RFC1-203ENST00000418436 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
RFC1-203ENST00000418436 PHF14O94880 888 aa13.79□□□□□ -0.2
RFC1-203ENST00000418436 PLCG2P16885 1265 aa13.79□□□□□ -0.2
RFC1-203ENST00000418436 TRAPPC3LQ5T215 181 aa13.79□□□□□ -0.2
RFC1-203ENST00000418436 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
RFC1-203ENST00000418436 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
RFC1-203ENST00000418436 STARD3NLO95772 234 aa13.78□□□□□ -0.2
RFC1-203ENST00000418436 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
RFC1-203ENST00000418436 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
RFC1-203ENST00000418436 GOLGA2Q08379 1002 aa13.78□□□□□ -0.2
RFC1-203ENST00000418436 ARHGEF1Q92888 912 aaKnown RBP13.78□□□□□ -0.2
RFC1-203ENST00000418436 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
RFC1-203ENST00000418436 CHL1O00533 1208 aa13.77□□□□□ -0.21
RFC1-203ENST00000418436 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
RFC1-203ENST00000418436 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.21
RFC1-203ENST00000418436 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.21
RFC1-203ENST00000418436 USP16Q9Y5T5 823 aa13.77□□□□□ -0.21
RFC1-203ENST00000418436 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
RFC1-203ENST00000418436 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
RFC1-203ENST00000418436 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
RFC1-203ENST00000418436 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
RFC1-203ENST00000418436 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
RFC1-203ENST00000418436 GIGYF1O75420 1035 aaPredicted RBP13.75□□□□□ -0.21
RFC1-203ENST00000418436 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
RFC1-203ENST00000418436 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
RFC1-203ENST00000418436 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
RFC1-203ENST00000418436 A1BGP04217 495 aa13.74□□□□□ -0.21
RFC1-203ENST00000418436 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
RFC1-203ENST00000418436 CANXP27824 592 aaKnown RBP13.74□□□□□ -0.21
RFC1-203ENST00000418436 RFC4P35249 363 aa13.74□□□□□ -0.21
RFC1-203ENST00000418436 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
RFC1-203ENST00000418436 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
RFC1-203ENST00000418436 COL15A1P39059 1388 aa13.73□□□□□ -0.21
RFC1-203ENST00000418436 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
RFC1-203ENST00000418436 GYS1P13807 737 aa13.73□□□□□ -0.21
RFC1-203ENST00000418436 POLD1P28340 1107 aa13.73□□□□□ -0.21
RFC1-203ENST00000418436 CALD1Q05682 793 aaKnown RBP13.73□□□□□ -0.21
RFC1-203ENST00000418436 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
RFC1-203ENST00000418436 ARXQ96QS3 562 aa13.73□□□□□ -0.21
RFC1-203ENST00000418436 SCUBE2Q9NQ36 999 aa13.73□□□□□ -0.21
RFC1-203ENST00000418436 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
RFC1-203ENST00000418436 WWC1Q8IX03 1113 aa13.72□□□□□ -0.21
RFC1-203ENST00000418436 NLGN1Q8N2Q7 840 aa13.72□□□□□ -0.21
RFC1-203ENST00000418436 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
RFC1-203ENST00000418436 NARFQ9UHQ1 456 aa13.72□□□□□ -0.21
RFC1-203ENST00000418436 A0A087WZG4 1122 aa13.71□□□□□ -0.21
RFC1-203ENST00000418436 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
RFC1-203ENST00000418436 GNAI1P63096 354 aa13.71□□□□□ -0.21
RFC1-203ENST00000418436 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
RFC1-203ENST00000418436 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
RFC1-203ENST00000418436 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
RFC1-203ENST00000418436 LAS1LQ9Y4W2 734 aaKnown RBP13.71□□□□□ -0.21
RFC1-203ENST00000418436 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
RFC1-203ENST00000418436 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
RFC1-203ENST00000418436 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
RFC1-203ENST00000418436 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
RFC1-203ENST00000418436 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
RFC1-203ENST00000418436 IL16Q14005 1332 aa13.69□□□□□ -0.22
RFC1-203ENST00000418436 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
RFC1-203ENST00000418436 ZPR1O75312 459 aa13.69□□□□□ -0.22
RFC1-203ENST00000418436 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
RFC1-203ENST00000418436 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
RFC1-203ENST00000418436 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
RFC1-203ENST00000418436 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
RFC1-203ENST00000418436 TM4SF1P30408 202 aa13.68□□□□□ -0.22
RFC1-203ENST00000418436 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
RFC1-203ENST00000418436 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
RFC1-203ENST00000418436 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
RFC1-203ENST00000418436 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
RFC1-203ENST00000418436 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
RFC1-203ENST00000418436 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
RFC1-203ENST00000418436 MMP10P09238 476 aa13.67□□□□□ -0.22
RFC1-203ENST00000418436 HOXB7P09629 217 aa13.67□□□□□ -0.22
RFC1-203ENST00000418436 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
RFC1-203ENST00000418436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
RFC1-203ENST00000418436 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
RFC1-203ENST00000418436 PDIA6Q15084 440 aa13.66□□□□□ -0.22
RFC1-203ENST00000418436 LRP10Q7Z4F1 713 aa13.66□□□□□ -0.22
RFC1-203ENST00000418436 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
RFC1-203ENST00000418436 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
RFC1-203ENST00000418436 NRXN2Q9P2S2 1712 aa13.66□□□□□ -0.22
RFC1-203ENST00000418436 AFDNP55196 1824 aaKnown RBP13.66□□□□□ -0.22
RFC1-203ENST00000418436 RGL2O15211 777 aa13.65□□□□□ -0.22
RFC1-203ENST00000418436 DUSP27Q5VZP5 1158 aa13.65□□□□□ -0.22
RFC1-203ENST00000418436 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
RFC1-203ENST00000418436 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
RFC1-203ENST00000418436 SALL2Q9Y467 1007 aaPredicted RBP13.65□□□□□ -0.22
RFC1-203ENST00000418436 CD2APQ9Y5K6 639 aa13.65□□□□□ -0.22
RFC1-203ENST00000418436 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
RFC1-203ENST00000418436 EIF2S2P20042 333 aaKnown RBP13.64□□□□□ -0.23
RFC1-203ENST00000418436 DDR1Q08345 913 aa13.64□□□□□ -0.23
RFC1-203ENST00000418436 NFIXQ14938 502 aa13.64□□□□□ -0.23
RFC1-203ENST00000418436 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms