RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 CKAP2LQ8IYA6 745 aa20.75■□□□□ 0.91
PMS1-206ENST00000418224 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
PMS1-206ENST00000418224 FAM200AQ8TCP9 573 aa20.75■□□□□ 0.91
PMS1-206ENST00000418224 MON2Q7Z3U7 1717 aa20.75■□□□□ 0.91
PMS1-206ENST00000418224 HNRNPH2P55795 449 aaKnown RBP20.74■□□□□ 0.91
PMS1-206ENST00000418224 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
PMS1-206ENST00000418224 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
PMS1-206ENST00000418224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.74■□□□□ 0.91
PMS1-206ENST00000418224 ZFP91Q96JP5 570 aaPredicted RBP20.74■□□□□ 0.91
PMS1-206ENST00000418224 F13A1P00488 732 aa20.73■□□□□ 0.91
PMS1-206ENST00000418224 AMPHP49418 695 aa20.73■□□□□ 0.91
PMS1-206ENST00000418224 GTF3C6Q969F1 213 aa20.73■□□□□ 0.91
PMS1-206ENST00000418224 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.73■□□□□ 0.91
PMS1-206ENST00000418224 C3P01024 1663 aa20.73■□□□□ 0.91
PMS1-206ENST00000418224 TULP2O00295 520 aa20.73■□□□□ 0.91
PMS1-206ENST00000418224 CACTINQ8WUQ7 758 aaKnown RBP20.73■□□□□ 0.91
PMS1-206ENST00000418224 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
PMS1-206ENST00000418224 UBTFL1P0CB47 393 aaPredicted RBP20.72■□□□□ 0.91
PMS1-206ENST00000418224 SMC3Q9UQE7 1217 aa20.72■□□□□ 0.91
PMS1-206ENST00000418224 SETD1AO15047 1707 aaKnown RBP20.72■□□□□ 0.91
PMS1-206ENST00000418224 ITSN1Q15811 1721 aa20.72■□□□□ 0.91
PMS1-206ENST00000418224 SLC20A2Q08357 652 aa20.72■□□□□ 0.91
PMS1-206ENST00000418224 SURF6O75683 361 aaKnown RBP20.71■□□□□ 0.91
PMS1-206ENST00000418224 TYRO3Q06418 890 aa20.71■□□□□ 0.91
PMS1-206ENST00000418224 TRMT1Q9NXH9 659 aaKnown RBP20.71■□□□□ 0.91
PMS1-206ENST00000418224 USP27XA6NNY8 438 aa20.71■□□□□ 0.91
PMS1-206ENST00000418224 FAM69CQ0P6D2 419 aa20.71■□□□□ 0.91
PMS1-206ENST00000418224 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
PMS1-206ENST00000418224 ATP6V1DQ9Y5K8 247 aa20.71■□□□□ 0.91
PMS1-206ENST00000418224 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 STAP2Q9UGK3 403 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 MRVI1Q9Y6F6 885 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 ROBO2Q9HCK4 1378 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 VPS37CA5D8V6 355 aaPredicted RBP20.7■□□□□ 0.9
PMS1-206ENST00000418224 EYA1Q99502 592 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 CBX8Q9HC52 389 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 TNNT3P45378 269 aaPredicted RBP20.7■□□□□ 0.9
PMS1-206ENST00000418224 IRX3P78415 501 aaPredicted RBP20.7■□□□□ 0.9
PMS1-206ENST00000418224 MAP3K11Q16584 847 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 CLIP2Q9UDT6 1046 aa20.7■□□□□ 0.9
PMS1-206ENST00000418224 HDGFP51858 240 aaKnown RBP20.69■□□□□ 0.9
PMS1-206ENST00000418224 OVOS2A0A0J9YW53 1432 aa20.69■□□□□ 0.9
PMS1-206ENST00000418224 OVOS2Q6IE36 1432 aa20.69■□□□□ 0.9
PMS1-206ENST00000418224 HSPA4P34932 840 aa20.69■□□□□ 0.9
PMS1-206ENST00000418224 ZNF75DP51815 510 aa20.69■□□□□ 0.9
PMS1-206ENST00000418224 ARID5BQ14865 1188 aa20.69■□□□□ 0.9
PMS1-206ENST00000418224 PTPN14Q15678 1187 aa20.68■□□□□ 0.9
PMS1-206ENST00000418224 CCDC144BQ3MJ40 725 aa20.68■□□□□ 0.9
PMS1-206ENST00000418224 CCDC144CPQ8IYA2 1237 aa20.68■□□□□ 0.9
PMS1-206ENST00000418224 USP44Q9H0E7 712 aa20.68■□□□□ 0.9
PMS1-206ENST00000418224 NUP62CLQ9H1M0 184 aa20.68■□□□□ 0.9
PMS1-206ENST00000418224 SSH2Q76I76 1423 aa20.68■□□□□ 0.9
PMS1-206ENST00000418224 FEZ2Q9UHY8 353 aaPredicted RBP20.68■□□□□ 0.9
PMS1-206ENST00000418224 RIMS1Q86UR5 1692 aaKnown RBP20.68■□□□□ 0.9
PMS1-206ENST00000418224 NRXN3Q9Y4C0 1643 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 AKAP12Q02952 1782 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 ARHGEF10O15013 1369 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 CPA1P15085 419 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 LIG1P18858 919 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 LTV1Q96GA3 475 aaPredicted RBP20.67■□□□□ 0.9
PMS1-206ENST00000418224 ZNF446Q9NWS9 450 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 PPP1R42Q7Z4L9 355 aa20.67■□□□□ 0.9
PMS1-206ENST00000418224 SOS1Q07889 1333 aaPredicted RBP20.66■□□□□ 0.9
PMS1-206ENST00000418224 CYP2C19P33261 490 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 AK2P54819 239 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 PEAK1Q9H792 1746 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 USP6P35125 1406 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 FAM173BQ6P4H8 233 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 CWC27Q6UX04 472 aaKnown RBP20.66■□□□□ 0.9
PMS1-206ENST00000418224 SIRT1Q96EB6 747 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 SPG7Q9UQ90 795 aa20.66■□□□□ 0.9
PMS1-206ENST00000418224 RAD51AP2Q09MP3 1159 aa20.65■□□□□ 0.9
PMS1-206ENST00000418224 FERMT3Q86UX7 667 aa20.65■□□□□ 0.9
PMS1-206ENST00000418224 CCDC83Q8IWF9 413 aa20.65■□□□□ 0.9
PMS1-206ENST00000418224 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
PMS1-206ENST00000418224 SNX14Q9Y5W7 946 aa20.65■□□□□ 0.9
PMS1-206ENST00000418224 GNAT3A8MTJ3 354 aa20.65■□□□□ 0.9
PMS1-206ENST00000418224 POLR3GO15318 223 aaPredicted RBP20.65■□□□□ 0.9
PMS1-206ENST00000418224 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
PMS1-206ENST00000418224 TNMDQ9H2S6 317 aa20.65■□□□□ 0.9
PMS1-206ENST00000418224 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 SRGAP3O43295 1099 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.9
PMS1-206ENST00000418224 GJB2P29033 226 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 RASEFQ8IZ41 740 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 FAM53CQ9NYF3 392 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.9
PMS1-206ENST00000418224 NEK11Q8NG66 645 aa20.64■□□□□ 0.89
PMS1-206ENST00000418224 RHPN1Q8TCX5 695 aa20.64■□□□□ 0.89
PMS1-206ENST00000418224 FLT4P35916 1363 aa20.64■□□□□ 0.89
PMS1-206ENST00000418224 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
PMS1-206ENST00000418224 RAD50Q92878 1312 aa20.63■□□□□ 0.89
PMS1-206ENST00000418224 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
PMS1-206ENST00000418224 RUFY3Q7L099 469 aa20.63■□□□□ 0.89
PMS1-206ENST00000418224 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
PMS1-206ENST00000418224 DACT1Q9NYF0 836 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms