RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
RBM39-209ENST00000416529 DDB1Q16531 1140 aa10.17□□□□□ -0.78
RBM39-209ENST00000416529 HPS5Q9UPZ3 1129 aa10.17□□□□□ -0.78
RBM39-209ENST00000416529 GLI3P10071 1580 aa10.17□□□□□ -0.78
RBM39-209ENST00000416529 TNS2Q63HR2 1409 aa10.16□□□□□ -0.78
RBM39-209ENST00000416529 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
RBM39-209ENST00000416529 FBLN1P23142 703 aa10.16□□□□□ -0.78
RBM39-209ENST00000416529 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.782e-21■□□□□ 10.6
RBM39-209ENST00000416529 SEPT12Q8IYM1 358 aa10.16□□□□□ -0.78
RBM39-209ENST00000416529 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
RBM39-209ENST00000416529 NECTIN2Q92692 538 aa10.16□□□□□ -0.78
RBM39-209ENST00000416529 WBP1LQ9NX94 342 aa10.16□□□□□ -0.78
RBM39-209ENST00000416529 LRP5O75197 1615 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 PDE3BQ13370 1112 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 SULT6B1Q6IMI4 303 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 IFNL2Q8IZJ0 200 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 PNISRQ8TF01 805 aaKnown RBP10.15□□□□□ -0.78
RBM39-209ENST00000416529 LTV1Q96GA3 475 aaPredicted RBP10.15□□□□□ -0.78
RBM39-209ENST00000416529 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 PKD1L3Q7Z443 1732 aa10.15□□□□□ -0.78
RBM39-209ENST00000416529 BRWD3Q6RI45 1802 aa10.14□□□□□ -0.79
RBM39-209ENST00000416529 U2SURPO15042 1029 aaKnown RBP10.14□□□□□ -0.79
RBM39-209ENST00000416529 BAG6P46379 1132 aa10.14□□□□□ -0.79
RBM39-209ENST00000416529 PPP4CP60510 307 aa10.14□□□□□ -0.79
RBM39-209ENST00000416529 KCNC4Q03721 635 aa10.14□□□□□ -0.79
RBM39-209ENST00000416529 R3HDM1Q15032 1099 aaKnown RBP10.14□□□□□ -0.79
RBM39-209ENST00000416529 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
RBM39-209ENST00000416529 TATDN2Q93075 761 aa10.14□□□□□ -0.79
RBM39-209ENST00000416529 MAPK8IP3Q9UPT6 1336 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 YY1P25490 414 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 AKAP4Q5JQC9 854 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 KRT27Q7Z3Y8 459 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 RUNDC1Q96C34 613 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 PNMA3Q9UL41 463 aa10.13□□□□□ -0.79
RBM39-209ENST00000416529 ERVV-2B6SEH9 535 aa10.12□□□□□ -0.79
RBM39-209ENST00000416529 CALD1Q05682 793 aaKnown RBP10.12□□□□□ -0.79
RBM39-209ENST00000416529 C1orf141Q5JVX7 400 aa10.12□□□□□ -0.79
RBM39-209ENST00000416529 DCAF5Q96JK2 942 aa10.12□□□□□ -0.79
RBM39-209ENST00000416529 BABAM1Q9NWV8 329 aa10.12□□□□□ -0.79
RBM39-209ENST00000416529 RGPD2P0DJD1 1756 aa10.11□□□□□ -0.79
RBM39-209ENST00000416529 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
RBM39-209ENST00000416529 CCDC27Q2M243 656 aa10.11□□□□□ -0.79
RBM39-209ENST00000416529 PLEKHF1Q96S99 279 aa10.11□□□□□ -0.79
RBM39-209ENST00000416529 PRKAR2BP31323 418 aa10.1□□□□□ -0.79
RBM39-209ENST00000416529 CHMP4AQ9BY43 222 aa10.1□□□□□ -0.79
RBM39-209ENST00000416529 CDHR5Q9HBB8 845 aa10.1□□□□□ -0.79
RBM39-209ENST00000416529 USP35Q9P2H5 1018 aa10.1□□□□□ -0.79
RBM39-209ENST00000416529 MEGF6O75095 1541 aa10.1□□□□□ -0.79
RBM39-209ENST00000416529 LRRC37A3O60309 1634 aa10.1□□□□□ -0.79
RBM39-209ENST00000416529 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
RBM39-209ENST00000416529 PHKG2P15735 406 aa10.09□□□□□ -0.79
RBM39-209ENST00000416529 FAM182BQ5T319 152 aa10.09□□□□□ -0.79
RBM39-209ENST00000416529 SAMD7Q7Z3H4 446 aa10.09□□□□□ -0.79
RBM39-209ENST00000416529 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
RBM39-209ENST00000416529 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
RBM39-209ENST00000416529 CNGB1Q14028 1251 aaPredicted RBP10.08□□□□□ -0.8
RBM39-209ENST00000416529 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
RBM39-209ENST00000416529 ZNF530Q6P9A1 599 aaPredicted RBP10.08□□□□□ -0.8
RBM39-209ENST00000416529 NUDT18Q6ZVK8 323 aa10.08□□□□□ -0.8
RBM39-209ENST00000416529 RTF1Q92541 710 aaKnown RBP10.08□□□□□ -0.8
RBM39-209ENST00000416529 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
RBM39-209ENST00000416529 ADAMTS7Q9UKP4 1686 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 CEMIPQ8WUJ3 1361 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 MAP3K5Q99683 1374 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 SMAPO00193 183 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 HMOX1P09601 288 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
RBM39-209ENST00000416529 SMARCC1Q92922 1105 aaPredicted RBP10.07□□□□□ -0.8
RBM39-209ENST00000416529 PPP1R1BQ9UD71 204 aaPredicted RBP10.07□□□□□ -0.8
RBM39-209ENST00000416529 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
RBM39-209ENST00000416529 CYP27B1O15528 508 aa10.06□□□□□ -0.8
RBM39-209ENST00000416529 MTHFSDQ2M296 383 aaKnown RBP10.06□□□□□ -0.8
RBM39-209ENST00000416529 USHBP1Q8N6Y0 703 aa10.06□□□□□ -0.8
RBM39-209ENST00000416529 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
RBM39-209ENST00000416529 IL16Q14005 1332 aa10.06□□□□□ -0.8
RBM39-209ENST00000416529 MRC1P22897 1456 aa10.05□□□□□ -0.8
RBM39-209ENST00000416529 SHANK3Q9BYB0 1731 aa10.05□□□□□ -0.8
RBM39-209ENST00000416529 PLSCR1O15162 318 aa10.05□□□□□ -0.8
RBM39-209ENST00000416529 TMPOP42166 694 aaKnown RBP10.05□□□□□ -0.8
RBM39-209ENST00000416529 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
RBM39-209ENST00000416529 SLF2Q8IX21 1173 aa10.05□□□□□ -0.8
RBM39-209ENST00000416529 RGPD3A6NKT7 1758 aaPredicted RBP10.05□□□□□ -0.8
RBM39-209ENST00000416529 RGPD4Q7Z3J3 1758 aa10.05□□□□□ -0.8
RBM39-209ENST00000416529 SCN11AQ9UI33 1791 aa10.04□□□□□ -0.8
RBM39-209ENST00000416529 RNMTO43148 476 aaKnown RBP10.04□□□□□ -0.8
RBM39-209ENST00000416529 EZH2Q15910 746 aaKnown RBP10.04□□□□□ -0.8
RBM39-209ENST00000416529 WDR63Q8IWG1 891 aa10.04□□□□□ -0.8
RBM39-209ENST00000416529 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
RBM39-209ENST00000416529 NPDC1Q9NQX5 325 aaPredicted RBP10.04□□□□□ -0.8
RBM39-209ENST00000416529 NHSQ6T4R5 1651 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 SBF2Q86WG5 1849 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 RNF40O75150 1001 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 RIPK4P57078 832 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 TEFQ10587 303 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms