RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
CPNE1-209ENST00000415920 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
CPNE1-209ENST00000415920 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
CPNE1-209ENST00000415920 IL16Q14005 1332 aa17.68■□□□□ 0.42
CPNE1-209ENST00000415920 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
CPNE1-209ENST00000415920 GNAI1P63096 354 aa17.67■□□□□ 0.42
CPNE1-209ENST00000415920 TAF7Q15545 349 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-209ENST00000415920 C2CD5Q86YS7 1000 aa17.67■□□□□ 0.42
CPNE1-209ENST00000415920 C16orf71Q8IYS4 520 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-209ENST00000415920 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
CPNE1-209ENST00000415920 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
CPNE1-209ENST00000415920 TSR2Q969E8 191 aaKnown RBP17.67■□□□□ 0.42
CPNE1-209ENST00000415920 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-209ENST00000415920 EIF5P55010 431 aaKnown RBP17.66■□□□□ 0.42
CPNE1-209ENST00000415920 TBC1D9BQ66K14 1250 aa17.66■□□□□ 0.42
CPNE1-209ENST00000415920 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
CPNE1-209ENST00000415920 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
CPNE1-209ENST00000415920 FANCIQ9NVI1 1328 aa17.66■□□□□ 0.42
CPNE1-209ENST00000415920 NFKBIEO00221 500 aa17.65■□□□□ 0.42
CPNE1-209ENST00000415920 CFAP44Q96MT7 982 aa17.65■□□□□ 0.42
CPNE1-209ENST00000415920 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
CPNE1-209ENST00000415920 KCNQ3O43525 872 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 FSTL1Q12841 308 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 TTLL6Q8N841 843 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 KLRG1Q96E93 195 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-209ENST00000415920 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
CPNE1-209ENST00000415920 CACNA1FO60840 1977 aa17.63■□□□□ 0.41
CPNE1-209ENST00000415920 E9PSI1 815 aa17.63■□□□□ 0.41
CPNE1-209ENST00000415920 LMNB1P20700 586 aa17.63■□□□□ 0.41
CPNE1-209ENST00000415920 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
CPNE1-209ENST00000415920 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-209ENST00000415920 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
CPNE1-209ENST00000415920 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-209ENST00000415920 CACNA1SQ13698 1873 aa17.62■□□□□ 0.41
CPNE1-209ENST00000415920 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 H0YIN7 160 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 CHL1O00533 1208 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 STARD3NLO95772 234 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 A1BGP04217 495 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 PRR5LQ6MZQ0 368 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 BCORQ6W2J9 1755 aa17.61■□□□□ 0.41
CPNE1-209ENST00000415920 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
CPNE1-209ENST00000415920 POTECB2RU33 542 aa17.6■□□□□ 0.41
CPNE1-209ENST00000415920 PIP4K2AP48426 406 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-209ENST00000415920 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
CPNE1-209ENST00000415920 JMYQ8N9B5 988 aa17.6■□□□□ 0.41
CPNE1-209ENST00000415920 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
CPNE1-209ENST00000415920 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
CPNE1-209ENST00000415920 A0A087WZG4 1122 aa17.59■□□□□ 0.41
CPNE1-209ENST00000415920 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
CPNE1-209ENST00000415920 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
CPNE1-209ENST00000415920 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
CPNE1-209ENST00000415920 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
CPNE1-209ENST00000415920 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
CPNE1-209ENST00000415920 C21orf2O43822 256 aa17.58■□□□□ 0.4
CPNE1-209ENST00000415920 CAMTA2O94983 1202 aa17.58■□□□□ 0.4
CPNE1-209ENST00000415920 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
CPNE1-209ENST00000415920 COL13A1Q5TAT6 717 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-209ENST00000415920 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-209ENST00000415920 EIF4A1P60842 406 aaKnown RBP17.57■□□□□ 0.4
CPNE1-209ENST00000415920 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
CPNE1-209ENST00000415920 VEGFAP15692 232 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-209ENST00000415920 DUSP27Q5VZP5 1158 aa17.56■□□□□ 0.4
CPNE1-209ENST00000415920 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
CPNE1-209ENST00000415920 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
CPNE1-209ENST00000415920 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
CPNE1-209ENST00000415920 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-209ENST00000415920 PDE6BP35913 854 aa17.54■□□□□ 0.4
CPNE1-209ENST00000415920 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-209ENST00000415920 POTEIP0CG38 1075 aa17.53■□□□□ 0.4
CPNE1-209ENST00000415920 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
CPNE1-209ENST00000415920 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-209ENST00000415920 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
CPNE1-209ENST00000415920 CNBD1Q8NA66 436 aa17.53■□□□□ 0.4
CPNE1-209ENST00000415920 SNRPA1P09661 255 aaKnown RBP17.52■□□□□ 0.4
CPNE1-209ENST00000415920 ERFEQ4G0M1 354 aa17.52■□□□□ 0.4
CPNE1-209ENST00000415920 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
CPNE1-209ENST00000415920 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
CPNE1-209ENST00000415920 C8orf58Q8NAV2 365 aa17.52■□□□□ 0.4
CPNE1-209ENST00000415920 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
CPNE1-209ENST00000415920 SRGNP10124 158 aa17.51■□□□□ 0.39
CPNE1-209ENST00000415920 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
CPNE1-209ENST00000415920 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
CPNE1-209ENST00000415920 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
CPNE1-209ENST00000415920 DDNO94850 711 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-209ENST00000415920 HOXB7P09629 217 aa17.5■□□□□ 0.39
CPNE1-209ENST00000415920 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
CPNE1-209ENST00000415920 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
CPNE1-209ENST00000415920 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
CPNE1-209ENST00000415920 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
CPNE1-209ENST00000415920 PCNTO95613 3336 aa17.5■□□□□ 0.39
CPNE1-209ENST00000415920 LTBP3Q9NS15 1303 aa17.49■□□□□ 0.39
CPNE1-209ENST00000415920 ANKRD36CQ5JPF3 1778 aa17.49■□□□□ 0.39
CPNE1-209ENST00000415920 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
CPNE1-209ENST00000415920 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms