RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 RMDN2Q96LZ7 410 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 TRIM6Q9C030 488 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 BRINP2Q9C0B6 783 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 TSPYL2Q9H2G4 693 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 CHL1O00533 1208 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 MMEP08473 750 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 PDXDC1Q6P996 788 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 SYNE3Q6ZMZ3 975 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 TRIML1Q8N9V2 468 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 GABPB2Q8TAK5 448 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-205ENST00000415891 DEF6Q9H4E7 631 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 AVENQ9NQS1 362 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-205ENST00000415891 RSPH14Q9UHP6 348 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 CHMP3Q9Y3E7 222 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 RNASEH2AO75792 299 aaKnown RBP7.94□□□□□ -1.14
CLIP4-205ENST00000415891 IMPDH2P12268 514 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 SMARCA1P28370 1054 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 ZBED6P86452 979 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 ADCY2Q08462 1091 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 PRPF4BQ13523 1007 aaKnown RBP7.94□□□□□ -1.14
CLIP4-205ENST00000415891 TRIM29Q14134 588 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 POLA2Q14181 598 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 PPP2R5BQ15173 497 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 CCDC178Q5BJE1 867 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 AGAP9Q5VTM2 703 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 WWC2Q6AWC2 1192 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 CCDC89Q8N998 374 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 JDP2Q8WYK2 163 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 FAM212AQ96EL1 285 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 MAP3K14Q99558 947 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 AS3MTQ9HBK9 375 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 TRPV5Q9NQA5 729 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 DDX56Q9NY93 547 aaKnown RBP7.94□□□□□ -1.14
CLIP4-205ENST00000415891 NINLQ9Y2I6 1382 aa7.94□□□□□ -1.14
CLIP4-205ENST00000415891 BAZ1BQ9UIG0 1483 aaKnown RBP7.93□□□□□ -1.14
CLIP4-205ENST00000415891 TBC1D12O60347 775 aa7.93□□□□□ -1.14
CLIP4-205ENST00000415891 MYBL2P10244 700 aa7.93□□□□□ -1.14
CLIP4-205ENST00000415891 GABPB1Q06547 395 aaPredicted RBP7.93□□□□□ -1.14
CLIP4-205ENST00000415891 NFKBIBQ15653 356 aa7.93□□□□□ -1.14
CLIP4-205ENST00000415891 COBLL1Q53SF7 1204 aa7.93□□□□□ -1.14
CLIP4-205ENST00000415891 ERP27Q96DN0 273 aa7.93□□□□□ -1.14
CLIP4-205ENST00000415891 UNC45AQ9H3U1 944 aa7.93□□□□□ -1.14
CLIP4-205ENST00000415891 TMEM238LA0A1B0GVL6 79 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 RECKO95980 971 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 TSPAN7P41732 249 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 ENOX2Q16206 610 aaKnown RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 PREPLQ4J6C6 727 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 MCTP2Q6DN12 878 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 PAF1Q8N7H5 531 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 YIPF2Q9BWQ6 316 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 DCAF16Q9NXF7 216 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 ASAP1Q9ULH1 1129 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 LZTS1Q9Y250 596 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 F8VZ95 297 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 KRT38O76015 456 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 CDKL5O76039 1030 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 MSL3P1P0C860 447 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 ALKBH2Q6NS38 261 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 MYLK4Q86YV6 388 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 RBM12BQ8IXT5 1001 aaKnown RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 JARID2Q92833 1246 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 TRIM11Q96F44 468 aa7.92□□□□□ -1.14
CLIP4-205ENST00000415891 CWC15Q9P013 229 aaKnown RBP7.92□□□□□ -1.14
CLIP4-205ENST00000415891 ATP6V1AP38606 617 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 EIF2B5Q13144 721 aaKnown RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 PKN1Q16512 942 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 LMBRD2Q68DH5 695 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 CHPFQ8IZ52 775 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 KRI1Q8N9T8 703 aaKnown RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 GBP4Q96PP9 640 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 TANGO6Q9C0B7 1094 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 XPO4Q9C0E2 1151 aaKnown RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 RPAP3Q9H6T3 665 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 KMT5AQ9NQR1 393 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 SMARCA2P51531 1590 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 IFRD1O00458 451 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 MYCLP1P12525 358 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 NSUN2Q08J23 767 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLIP4-205ENST00000415891 HELQQ8TDG4 1101 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 NACC2Q96BF6 587 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 KCNH8Q96L42 1107 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 TTC14Q96N46 770 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 FEZ1Q99689 392 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 NACA2Q9H009 215 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 IFT57Q9NWB7 429 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 CLIC5Q9NZA1 410 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 POLG2Q9UHN1 485 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 HDAC9Q9UKV0 1011 aa7.91□□□□□ -1.14
CLIP4-205ENST00000415891 FCHSD2O94868 740 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 VIL1P09327 827 aaKnown RBP7.9□□□□□ -1.14
CLIP4-205ENST00000415891 PRIM1P49642 420 aaKnown RBP7.9□□□□□ -1.14
CLIP4-205ENST00000415891 TAF11Q15544 211 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 C10orf62Q5T681 223 aaPredicted RBP7.9□□□□□ -1.14
CLIP4-205ENST00000415891 AP1ARQ63HQ0 302 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 ZFPM2Q8WW38 1151 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 DHRS1Q96LJ7 313 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 RNPC3Q96LT9 517 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms