RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ARFGEF2Q9Y6D5 1785 aa18.84■□□□□ 0.61
LRCH3-202ENST00000414675 K7ELQ4 463 aaPredicted RBP18.84■□□□□ 0.61
LRCH3-202ENST00000414675 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
LRCH3-202ENST00000414675 HSP90AB4PQ58FF6 505 aa18.84■□□□□ 0.61
LRCH3-202ENST00000414675 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
LRCH3-202ENST00000414675 PAPPAQ13219 1627 aa18.83■□□□□ 0.61
LRCH3-202ENST00000414675 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.61
LRCH3-202ENST00000414675 EVA1CP58658 441 aa18.83■□□□□ 0.61
LRCH3-202ENST00000414675 OS9Q13438 667 aaPredicted RBP18.83■□□□□ 0.61
LRCH3-202ENST00000414675 GCKRQ14397 625 aa18.83■□□□□ 0.61
LRCH3-202ENST00000414675 RABEP1Q15276 862 aa18.83■□□□□ 0.61
LRCH3-202ENST00000414675 AFDNP55196 1824 aaKnown RBP18.83■□□□□ 0.6
LRCH3-202ENST00000414675 KCPQ6ZWJ8 1503 aa18.83■□□□□ 0.6
LRCH3-202ENST00000414675 ERVV-2B6SEH9 535 aa18.83■□□□□ 0.6
LRCH3-202ENST00000414675 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
LRCH3-202ENST00000414675 TOGARAM1Q9Y4F4 1720 aa18.82■□□□□ 0.6
LRCH3-202ENST00000414675 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
LRCH3-202ENST00000414675 GSE1Q14687 1217 aa18.82■□□□□ 0.6
LRCH3-202ENST00000414675 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
LRCH3-202ENST00000414675 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
LRCH3-202ENST00000414675 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
LRCH3-202ENST00000414675 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
LRCH3-202ENST00000414675 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.82■□□□□ 0.6
LRCH3-202ENST00000414675 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
LRCH3-202ENST00000414675 IL25Q9H293 177 aa18.81■□□□□ 0.6
LRCH3-202ENST00000414675 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
LRCH3-202ENST00000414675 HDAC5Q9UQL6 1122 aa18.81■□□□□ 0.6
LRCH3-202ENST00000414675 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
LRCH3-202ENST00000414675 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
LRCH3-202ENST00000414675 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
LRCH3-202ENST00000414675 SASH1O94885 1247 aa18.79■□□□□ 0.6
LRCH3-202ENST00000414675 KLHDC4Q8TBB5 520 aa18.79■□□□□ 0.6
LRCH3-202ENST00000414675 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
LRCH3-202ENST00000414675 ROBO1Q9Y6N7 1651 aa18.78■□□□□ 0.6
LRCH3-202ENST00000414675 CLASRPQ8N2M8 674 aaKnown RBP18.77■□□□□ 0.6
LRCH3-202ENST00000414675 TNS2Q63HR2 1409 aa18.77■□□□□ 0.6
LRCH3-202ENST00000414675 A1BGP04217 495 aa18.77■□□□□ 0.6
LRCH3-202ENST00000414675 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.6
LRCH3-202ENST00000414675 ANO2Q9NQ90 1003 aa18.77■□□□□ 0.6
LRCH3-202ENST00000414675 PALD1Q9ULE6 856 aa18.77■□□□□ 0.6
LRCH3-202ENST00000414675 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
LRCH3-202ENST00000414675 PLBD2Q8NHP8 589 aa18.76■□□□□ 0.59
LRCH3-202ENST00000414675 SIL1Q9H173 461 aa18.76■□□□□ 0.59
LRCH3-202ENST00000414675 TTC41PQ6P2S7 1318 aa18.76■□□□□ 0.59
LRCH3-202ENST00000414675 NUP188Q5SRE5 1749 aa18.76■□□□□ 0.59
LRCH3-202ENST00000414675 ERBB4Q15303 1308 aa18.76■□□□□ 0.59
LRCH3-202ENST00000414675 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
LRCH3-202ENST00000414675 MCM4P33991 863 aa18.75■□□□□ 0.59
LRCH3-202ENST00000414675 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
LRCH3-202ENST00000414675 G3BP1Q13283 466 aaKnown RBP eCLIP18.75■□□□□ 0.59
LRCH3-202ENST00000414675 AACSQ86V21 672 aa18.75■□□□□ 0.59
LRCH3-202ENST00000414675 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
LRCH3-202ENST00000414675 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
LRCH3-202ENST00000414675 CASP7P55210 303 aa18.74■□□□□ 0.59
LRCH3-202ENST00000414675 ECHDC1Q9NTX5 307 aa18.74■□□□□ 0.59
LRCH3-202ENST00000414675 CIZ1Q9ULV3 898 aaPredicted RBP18.74■□□□□ 0.59
LRCH3-202ENST00000414675 IFIT2P09913 472 aaKnown RBP18.74■□□□□ 0.59
LRCH3-202ENST00000414675 CNTROBQ8N137 903 aa18.74■□□□□ 0.59
LRCH3-202ENST00000414675 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
LRCH3-202ENST00000414675 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
LRCH3-202ENST00000414675 A0A087WZG4 1122 aa18.73■□□□□ 0.59
LRCH3-202ENST00000414675 RFX5P48382 616 aaPredicted RBP18.73■□□□□ 0.59
LRCH3-202ENST00000414675 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
LRCH3-202ENST00000414675 ITGB4P16144 1822 aa18.72■□□□□ 0.59
LRCH3-202ENST00000414675 TJP1Q07157 1748 aa18.72■□□□□ 0.59
LRCH3-202ENST00000414675 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
LRCH3-202ENST00000414675 TNPO1Q92973 898 aaKnown RBP18.72■□□□□ 0.59
LRCH3-202ENST00000414675 CCDC8Q9H0W5 538 aaPredicted RBP18.72■□□□□ 0.59
LRCH3-202ENST00000414675 TMOD3Q9NYL9 352 aa18.72■□□□□ 0.59
LRCH3-202ENST00000414675 DISP2A7MBM2 1401 aa18.71■□□□□ 0.59
LRCH3-202ENST00000414675 SGSM2O43147 1006 aa18.71■□□□□ 0.59
LRCH3-202ENST00000414675 ST18O60284 1047 aa18.71■□□□□ 0.59
LRCH3-202ENST00000414675 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-202ENST00000414675 AHDC1Q5TGY3 1603 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-202ENST00000414675 COL15A1P39059 1388 aa18.71■□□□□ 0.59
LRCH3-202ENST00000414675 PIGBQ92521 554 aa18.71■□□□□ 0.59
LRCH3-202ENST00000414675 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.59
LRCH3-202ENST00000414675 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
LRCH3-202ENST00000414675 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
LRCH3-202ENST00000414675 COPRSQ9NQ92 184 aa18.7■□□□□ 0.58
LRCH3-202ENST00000414675 COL22A1Q8NFW1 1626 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-202ENST00000414675 KAT6BQ8WYB5 2073 aa18.7■□□□□ 0.58
LRCH3-202ENST00000414675 NEK4P51957 841 aa18.69■□□□□ 0.58
LRCH3-202ENST00000414675 GPATCH3Q96I76 525 aa18.69■□□□□ 0.58
LRCH3-202ENST00000414675 H7C1W4 665 aa18.69■□□□□ 0.58
LRCH3-202ENST00000414675 MCCP23508 829 aa18.69■□□□□ 0.58
LRCH3-202ENST00000414675 CWC27Q6UX04 472 aaKnown RBP18.69■□□□□ 0.58
LRCH3-202ENST00000414675 ANAPC15P60006 121 aa18.68■□□□□ 0.58
LRCH3-202ENST00000414675 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
LRCH3-202ENST00000414675 LSG1Q9H089 658 aaKnown RBP18.68■□□□□ 0.58
LRCH3-202ENST00000414675 HSPA4P34932 840 aa18.67■□□□□ 0.58
LRCH3-202ENST00000414675 ATG3Q9NT62 314 aa18.67■□□□□ 0.58
LRCH3-202ENST00000414675 RAD50Q92878 1312 aa18.67■□□□□ 0.58
LRCH3-202ENST00000414675 SSFA2P28290 1259 aa18.67■□□□□ 0.58
LRCH3-202ENST00000414675 FOXO4P98177 505 aa18.67■□□□□ 0.58
LRCH3-202ENST00000414675 DNAJC10Q8IXB1 793 aa18.67■□□□□ 0.58
LRCH3-202ENST00000414675 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
LRCH3-202ENST00000414675 ZGPATQ8N5A5 531 aaKnown RBP18.66■□□□□ 0.58
LRCH3-202ENST00000414675 CWC25Q9NXE8 425 aaPredicted RBP18.66■□□□□ 0.58
LRCH3-202ENST00000414675 PLCH1Q4KWH8 1693 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms