RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
DDB1-202ENST00000414411 ANXA1P04083 346 aa12.64□□□□□ -0.39
DDB1-202ENST00000414411 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
DDB1-202ENST00000414411 G2E3Q7L622 706 aa12.64□□□□□ -0.39
DDB1-202ENST00000414411 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
DDB1-202ENST00000414411 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
DDB1-202ENST00000414411 IL6STP40189 918 aaPredicted RBP12.64□□□□□ -0.39
DDB1-202ENST00000414411 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
DDB1-202ENST00000414411 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
DDB1-202ENST00000414411 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
DDB1-202ENST00000414411 MYL6BP14649 208 aa12.63□□□□□ -0.39
DDB1-202ENST00000414411 POTEDQ86YR6 584 aa12.63□□□□□ -0.39
DDB1-202ENST00000414411 KDM2BQ8NHM5 1336 aa12.63□□□□□ -0.39
DDB1-202ENST00000414411 MS4A1P11836 297 aa12.62□□□□□ -0.39
DDB1-202ENST00000414411 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
DDB1-202ENST00000414411 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
DDB1-202ENST00000414411 RPS6KA4O75676 772 aa12.62□□□□□ -0.39
DDB1-202ENST00000414411 FLIIQ13045 1269 aa12.62□□□□□ -0.39
DDB1-202ENST00000414411 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
DDB1-202ENST00000414411 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
DDB1-202ENST00000414411 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
DDB1-202ENST00000414411 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
DDB1-202ENST00000414411 ARHGAP45Q92619 1136 aa12.61□□□□□ -0.39
DDB1-202ENST00000414411 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
DDB1-202ENST00000414411 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
DDB1-202ENST00000414411 UBR3Q6ZT12 1888 aa12.6□□□□□ -0.39
DDB1-202ENST00000414411 PTPRCP08575 1304 aa12.6□□□□□ -0.39
DDB1-202ENST00000414411 GNPATO15228 680 aa12.6□□□□□ -0.39
DDB1-202ENST00000414411 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
DDB1-202ENST00000414411 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
DDB1-202ENST00000414411 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
DDB1-202ENST00000414411 TTLL7Q6ZT98 887 aa12.59□□□□□ -0.39
DDB1-202ENST00000414411 CENPQQ7L2Z9 268 aaPredicted RBP12.59□□□□□ -0.39
DDB1-202ENST00000414411 AK7Q96M32 723 aa12.59□□□□□ -0.39
DDB1-202ENST00000414411 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
DDB1-202ENST00000414411 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.39
DDB1-202ENST00000414411 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.39
DDB1-202ENST00000414411 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.39
DDB1-202ENST00000414411 ZKSCAN2Q63HK3 967 aa12.58□□□□□ -0.39
DDB1-202ENST00000414411 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.39
DDB1-202ENST00000414411 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.39
DDB1-202ENST00000414411 SMIM5Q71RC9 77 aa12.58□□□□□ -0.39
DDB1-202ENST00000414411 FRAT1Q92837 279 aaPredicted RBP12.58□□□□□ -0.39
DDB1-202ENST00000414411 ADCY9O60503 1353 aa12.58□□□□□ -0.4
DDB1-202ENST00000414411 COL15A1P39059 1388 aa12.58□□□□□ -0.4
DDB1-202ENST00000414411 TRIM27P14373 513 aa12.58□□□□□ -0.4
DDB1-202ENST00000414411 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
DDB1-202ENST00000414411 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
DDB1-202ENST00000414411 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
DDB1-202ENST00000414411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
DDB1-202ENST00000414411 PI4KAP2A4QPH2 592 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 PDE4AP27815 886 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 SSFA2P28290 1259 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 SLC15A2Q16348 729 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 PI4KAP1Q8N8J0 262 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
DDB1-202ENST00000414411 BACH2Q9BYV9 841 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 TBC1D2BQ9UPU7 963 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
DDB1-202ENST00000414411 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
DDB1-202ENST00000414411 A0A087WZG4 1122 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 ABCB7O75027 752 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 TRAPPC3LQ5T215 181 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
DDB1-202ENST00000414411 API5Q9BZZ5 524 aaKnown RBP12.56□□□□□ -0.4
DDB1-202ENST00000414411 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 TUBGCP6Q96RT7 1819 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 F6X3S4 739 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
DDB1-202ENST00000414411 NARFQ9UHQ1 456 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 NOP58Q9Y2X3 529 aaKnown RBP12.56□□□□□ -0.4
DDB1-202ENST00000414411 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
DDB1-202ENST00000414411 RGL2O15211 777 aa12.55□□□□□ -0.4
DDB1-202ENST00000414411 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
DDB1-202ENST00000414411 ABCC4O15439 1325 aa12.55□□□□□ -0.4
DDB1-202ENST00000414411 RLBP1P12271 317 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 HLFQ16534 295 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 GIGYF2Q6Y7W6 1299 aaKnown RBP12.54□□□□□ -0.4
DDB1-202ENST00000414411 KIF6Q6ZMV9 814 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 SKAP1Q86WV1 359 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 FLAD1Q8NFF5 587 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 DNAAF4Q8WXU2 420 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 IPO9Q96P70 1041 aaKnown RBP12.54□□□□□ -0.4
DDB1-202ENST00000414411 ZBTB3Q9H5J0 574 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 NUP98P52948 1817 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 PHF14O94880 888 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 COL23A1Q86Y22 540 aaPredicted RBP12.54□□□□□ -0.4
DDB1-202ENST00000414411 DZIP1LQ8IYY4 767 aaKnown RBP12.54□□□□□ -0.4
DDB1-202ENST00000414411 CLUAP1Q96AJ1 413 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 METTL22Q9BUU2 404 aaPredicted RBP12.54□□□□□ -0.4
DDB1-202ENST00000414411 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
DDB1-202ENST00000414411 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms