RNA–Protein interactions for RNA: ENST00000413748.6

SCG5-202, Transcript of secretogranin V, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCG5, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-202ENST00000413748 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
SCG5-202ENST00000413748 TAF1DQ9H5J8 278 aaPredicted RBP13.21□□□□□ -0.29
SCG5-202ENST00000413748 ZNF330Q9Y3S2 320 aaPredicted RBP13.21□□□□□ -0.29
SCG5-202ENST00000413748 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
SCG5-202ENST00000413748 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
SCG5-202ENST00000413748 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
SCG5-202ENST00000413748 VEGFBP49765 207 aa13.2□□□□□ -0.3
SCG5-202ENST00000413748 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
SCG5-202ENST00000413748 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
SCG5-202ENST00000413748 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
SCG5-202ENST00000413748 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 SETDB2Q96T68 719 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
SCG5-202ENST00000413748 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
SCG5-202ENST00000413748 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
SCG5-202ENST00000413748 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
SCG5-202ENST00000413748 LTBP1Q14766 1721 aa13.18□□□□□ -0.3
SCG5-202ENST00000413748 COL4A5P29400 1685 aa13.18□□□□□ -0.3
SCG5-202ENST00000413748 IQCA1LA6NCM1 817 aa13.17□□□□□ -0.3
SCG5-202ENST00000413748 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
SCG5-202ENST00000413748 ST5P78524 1137 aa13.17□□□□□ -0.3
SCG5-202ENST00000413748 TEFQ10587 303 aa13.17□□□□□ -0.3
SCG5-202ENST00000413748 DZIP3Q86Y13 1208 aaKnown RBP13.17□□□□□ -0.3
SCG5-202ENST00000413748 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
SCG5-202ENST00000413748 ZNF277Q9NRM2 450 aaPredicted RBP13.17□□□□□ -0.3
SCG5-202ENST00000413748 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
SCG5-202ENST00000413748 TMEM88BA6NKF7 163 aa13.16□□□□□ -0.3
SCG5-202ENST00000413748 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
SCG5-202ENST00000413748 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
SCG5-202ENST00000413748 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
SCG5-202ENST00000413748 THSD7BQ9C0I4 1608 aa13.16□□□□□ -0.3
SCG5-202ENST00000413748 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
SCG5-202ENST00000413748 LBX1P52954 281 aa13.15□□□□□ -0.3
SCG5-202ENST00000413748 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCG5-202ENST00000413748 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
SCG5-202ENST00000413748 EAPPQ56P03 285 aaPredicted RBP13.15□□□□□ -0.3
SCG5-202ENST00000413748 NBPF5PQ86XG9 351 aaPredicted RBP13.15□□□□□ -0.3
SCG5-202ENST00000413748 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
SCG5-202ENST00000413748 RNF123Q5XPI4 1314 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 FZD9O00144 591 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 NPR1P16066 1061 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 EPHX2P34913 555 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 MAP1SQ66K74 1059 aaPredicted RBP13.14□□□□□ -0.31
SCG5-202ENST00000413748 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
SCG5-202ENST00000413748 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 HACL1Q9UJ83 578 aa13.14□□□□□ -0.31
SCG5-202ENST00000413748 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
SCG5-202ENST00000413748 U2SURPO15042 1029 aaKnown RBP13.13□□□□□ -0.31
SCG5-202ENST00000413748 NPHP1O15259 732 aa13.13□□□□□ -0.31
SCG5-202ENST00000413748 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
SCG5-202ENST00000413748 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
SCG5-202ENST00000413748 TNRC18O15417 2968 aaPredicted RBP13.13□□□□□ -0.31
SCG5-202ENST00000413748 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
SCG5-202ENST00000413748 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
SCG5-202ENST00000413748 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
SCG5-202ENST00000413748 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
SCG5-202ENST00000413748 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
SCG5-202ENST00000413748 FMR1Q06787 632 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCG5-202ENST00000413748 HLFQ16534 295 aa13.11□□□□□ -0.31
SCG5-202ENST00000413748 ABHD8Q96I13 439 aa13.11□□□□□ -0.31
SCG5-202ENST00000413748 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
SCG5-202ENST00000413748 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
SCG5-202ENST00000413748 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 SLC34A2O95436 690 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 SYNE4Q8N205 404 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 NIP7Q9Y221 180 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCG5-202ENST00000413748 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 NUP98P52948 1817 aa13.1□□□□□ -0.31
SCG5-202ENST00000413748 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
SCG5-202ENST00000413748 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 TPTE2Q6XPS3 522 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 MCM10Q7L590 875 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
SCG5-202ENST00000413748 GPC2Q8N158 579 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 TRPM7Q96QT4 1865 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
SCG5-202ENST00000413748 RGL2O15211 777 aa13.08□□□□□ -0.32
SCG5-202ENST00000413748 CNGB1Q14028 1251 aaPredicted RBP13.08□□□□□ -0.32
SCG5-202ENST00000413748 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
SCG5-202ENST00000413748 NPM2Q86SE8 214 aaKnown RBP13.08□□□□□ -0.32
SCG5-202ENST00000413748 PSMD1Q99460 953 aa13.08□□□□□ -0.32
SCG5-202ENST00000413748 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
SCG5-202ENST00000413748 SCNN1DP51172 638 aa13.07□□□□□ -0.32
SCG5-202ENST00000413748 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
SCG5-202ENST00000413748 CST9Q5W186 159 aa13.07□□□□□ -0.32
SCG5-202ENST00000413748 KDM3BQ7LBC6 1761 aa13.07□□□□□ -0.32
SCG5-202ENST00000413748 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
SCG5-202ENST00000413748 EPS15P42566 896 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms