RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 PDIA6Q15084 440 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
CPSF4-202ENST00000412686 WDR63Q8IWG1 891 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 FHDC1Q9C0D6 1143 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-202ENST00000412686 CHPF2Q9P2E5 772 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 IL16Q14005 1332 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 AFDNP55196 1824 aaKnown RBP10.01□□□□□ -0.81
CPSF4-202ENST00000412686 TCERG1O14776 1098 aaKnown RBP10.01□□□□□ -0.81
CPSF4-202ENST00000412686 NFIXQ14938 502 aa10.01□□□□□ -0.81
CPSF4-202ENST00000412686 HDGFL1Q5TGJ6 251 aa10.01□□□□□ -0.81
CPSF4-202ENST00000412686 BICDL1Q6ZP65 573 aa10.01□□□□□ -0.81
CPSF4-202ENST00000412686 TTLL7Q6ZT98 887 aa10.01□□□□□ -0.81
CPSF4-202ENST00000412686 A0A087WZG4 1122 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 EXOSC9Q06265 439 aaKnown RBP10□□□□□ -0.81
CPSF4-202ENST00000412686 HLFQ16534 295 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 TBC1D9BQ66K14 1250 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 NPM2Q86SE8 214 aaKnown RBP10□□□□□ -0.81
CPSF4-202ENST00000412686 NLGN1Q8N2Q7 840 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 NLGN2Q8NFZ4 835 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 CDCA7LQ96GN5 454 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 ERBB4Q15303 1308 aa10□□□□□ -0.81
CPSF4-202ENST00000412686 NUP98P52948 1817 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 POLRMTO00411 1230 aaKnown RBP9.99□□□□□ -0.81
CPSF4-202ENST00000412686 HOXB7P09629 217 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 TM4SF1P30408 202 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 SYT17Q9BSW7 474 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 ZBTB3Q9H5J0 574 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
CPSF4-202ENST00000412686 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 HNRNPUQ00839 825 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPSF4-202ENST00000412686 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 AIMP1Q12904 312 aaKnown RBP9.98□□□□□ -0.81
CPSF4-202ENST00000412686 TWISTNBQ3B726 338 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-202ENST00000412686 COPS6Q7L5N1 327 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 CCDC24Q8N4L8 307 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 XAGE3Q8WTP9 111 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPSF4-202ENST00000412686 WWC3Q9ULE0 1092 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 MAP3K15Q6ZN16 1313 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 CARMIL3Q8ND23 1372 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-202ENST00000412686 C10orf71Q711Q0 1435 aa9.98□□□□□ -0.81
CPSF4-202ENST00000412686 SLFN5Q08AF3 891 aa9.97□□□□□ -0.81
CPSF4-202ENST00000412686 KIF6Q6ZMV9 814 aa9.97□□□□□ -0.81
CPSF4-202ENST00000412686 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
CPSF4-202ENST00000412686 PHAXQ9H814 394 aaKnown RBP9.97□□□□□ -0.81
CPSF4-202ENST00000412686 ANKRD36CQ5JPF3 1778 aa9.96□□□□□ -0.81
CPSF4-202ENST00000412686 ARFGEF2Q9Y6D5 1785 aa9.96□□□□□ -0.81
CPSF4-202ENST00000412686 ANKRD31Q8N7Z5 1873 aa9.96□□□□□ -0.81
CPSF4-202ENST00000412686 FAM177BA6PVY3 158 aa9.96□□□□□ -0.82
CPSF4-202ENST00000412686 VAMP4O75379 141 aa9.96□□□□□ -0.82
CPSF4-202ENST00000412686 SERPINB2P05120 415 aa9.96□□□□□ -0.82
CPSF4-202ENST00000412686 GPTP24298 496 aa9.96□□□□□ -0.82
CPSF4-202ENST00000412686 G2E3Q7L622 706 aa9.96□□□□□ -0.82
CPSF4-202ENST00000412686 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
CPSF4-202ENST00000412686 DBF4Q9UBU7 674 aaPredicted RBP9.96□□□□□ -0.82
CPSF4-202ENST00000412686 CCDC30Q5VVM6 783 aa9.95□□□□□ -0.82
CPSF4-202ENST00000412686 NIP7Q9Y221 180 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPSF4-202ENST00000412686 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
CPSF4-202ENST00000412686 PXDNLA1KZ92 1463 aa9.95□□□□□ -0.82
CPSF4-202ENST00000412686 COL11A2P13942 1736 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-202ENST00000412686 TNRC6CQ9HCJ0 1690 aaKnown RBP9.94□□□□□ -0.82
CPSF4-202ENST00000412686 ATP10DQ9P241 1426 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 ERVV-1B6SEH8 477 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 E9PSI1 815 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 PRR5LQ6MZQ0 368 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 SETDB2Q96T68 719 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 HYPKQ9NX55 129 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 ZNF652Q9Y2D9 606 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 CD2APQ9Y5K6 639 aa9.94□□□□□ -0.82
CPSF4-202ENST00000412686 CHRNA5P30532 468 aa9.93□□□□□ -0.82
CPSF4-202ENST00000412686 GIGYF2Q6Y7W6 1299 aaKnown RBP9.93□□□□□ -0.82
CPSF4-202ENST00000412686 TRMT2AQ8IZ69 625 aaKnown RBP9.93□□□□□ -0.82
CPSF4-202ENST00000412686 BRCA1P38398 1863 aaKnown RBP9.93□□□□□ -0.82
CPSF4-202ENST00000412686 ABCC12Q96J65 1359 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 A0A0G2JLW4 131 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 DPEP1P16444 411 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 SUSD4Q5VX71 490 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 ANKRD13DQ6ZTN6 518 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 ZNF34Q8IZ26 560 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CPSF4-202ENST00000412686 CNBD1Q8NA66 436 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 PLBD2Q8NHP8 589 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 STK31Q9BXU1 1019 aa9.92□□□□□ -0.82
CPSF4-202ENST00000412686 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 ADCY9O60503 1353 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 ATP5J2-PTCD1G3V325 749 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 RGL2O15211 777 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 YBX3P16989 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPSF4-202ENST00000412686 TCIRG1Q13488 830 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 NBPF5PQ86XG9 351 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-202ENST00000412686 BCL2L13Q9BXK5 485 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 CACNA1SQ13698 1873 aa9.91□□□□□ -0.82
CPSF4-202ENST00000412686 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms