RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 K7ELQ4 463 aaPredicted RBP30.07■■■□□ 2.4
VRK2-202ENST00000412104 ANKRD13DQ6ZTN6 518 aa30.07■■■□□ 2.4
VRK2-202ENST00000412104 MYD88Q99836 296 aa30.07■■■□□ 2.4
VRK2-202ENST00000412104 AFDNP55196 1824 aaKnown RBP30.07■■■□□ 2.4
VRK2-202ENST00000412104 KCPQ6ZWJ8 1503 aa30.06■■■□□ 2.4
VRK2-202ENST00000412104 UNC5CLQ8IV45 518 aa30.06■■■□□ 2.4
VRK2-202ENST00000412104 PI4K2BQ8TCG2 481 aa30.06■■■□□ 2.4
VRK2-202ENST00000412104 ESYT1Q9BSJ8 1104 aa30.06■■■□□ 2.4
VRK2-202ENST00000412104 BICC1Q9H694 974 aaKnown RBP30.06■■■□□ 2.4
VRK2-202ENST00000412104 CHMLP26374 656 aa30.05■■■□□ 2.4
VRK2-202ENST00000412104 DDIT3P35638 169 aa30.05■■■□□ 2.4
VRK2-202ENST00000412104 GCKRQ14397 625 aa30.05■■■□□ 2.4
VRK2-202ENST00000412104 DDX54Q8TDD1 881 aaKnown RBP30.04■■■□□ 2.4
VRK2-202ENST00000412104 PA2G4Q9UQ80 394 aaKnown RBP30.04■■■□□ 2.4
VRK2-202ENST00000412104 TOGARAM1Q9Y4F4 1720 aa30.04■■■□□ 2.4
VRK2-202ENST00000412104 ERBB4Q15303 1308 aa30.03■■■□□ 2.4
VRK2-202ENST00000412104 USP42Q9H9J4 1324 aaKnown RBP30.03■■■□□ 2.4
VRK2-202ENST00000412104 ERC1Q8IUD2 1116 aa30.02■■■□□ 2.4
VRK2-202ENST00000412104 ROBO1Q9Y6N7 1651 aa30.02■■■□□ 2.4
VRK2-202ENST00000412104 TNS2Q63HR2 1409 aa30■■■□□ 2.39
VRK2-202ENST00000412104 CLASRPQ8N2M8 674 aaKnown RBP30■■■□□ 2.39
VRK2-202ENST00000412104 TTC41PQ6P2S7 1318 aa29.99■■■□□ 2.39
VRK2-202ENST00000412104 COL14A1Q05707 1796 aaKnown RBP29.99■■■□□ 2.39
VRK2-202ENST00000412104 NBPF26B4DH59 902 aa29.98■■■□□ 2.39
VRK2-202ENST00000412104 NBPF14Q5TI25 921 aa29.98■■■□□ 2.39
VRK2-202ENST00000412104 NBPF10Q6P3W6 841 aaKnown RBP29.98■■■□□ 2.39
VRK2-202ENST00000412104 NBPF15Q8N660 670 aa29.98■■■□□ 2.39
VRK2-202ENST00000412104 PLBD2Q8NHP8 589 aa29.98■■■□□ 2.39
VRK2-202ENST00000412104 BTG4Q9NY30 223 aa29.98■■■□□ 2.39
VRK2-202ENST00000412104 MAP4K4O95819 1239 aaPredicted RBP29.97■■■□□ 2.39
VRK2-202ENST00000412104 NUP188Q5SRE5 1749 aa29.97■■■□□ 2.39
VRK2-202ENST00000412104 HSP90AA1P07900 732 aaKnown RBP29.96■■■□□ 2.39
VRK2-202ENST00000412104 AHDC1Q5TGY3 1603 aaPredicted RBP29.96■■■□□ 2.39
VRK2-202ENST00000412104 CIZ1Q9ULV3 898 aaPredicted RBP29.96■■■□□ 2.39
VRK2-202ENST00000412104 EPHA10Q5JZY3 1008 aa29.95■■■□□ 2.39
VRK2-202ENST00000412104 COL22A1Q8NFW1 1626 aaPredicted RBP29.95■■■□□ 2.38
VRK2-202ENST00000412104 CNTROBQ8N137 903 aa29.94■■■□□ 2.38
VRK2-202ENST00000412104 ANO2Q9NQ90 1003 aa29.94■■■□□ 2.38
VRK2-202ENST00000412104 GLRX3O76003 335 aaKnown RBP29.94■■■□□ 2.38
VRK2-202ENST00000412104 G3BP1Q13283 466 aaKnown RBP eCLIP29.94■■■□□ 2.38
VRK2-202ENST00000412104 GSE1Q14687 1217 aa29.94■■■□□ 2.38
VRK2-202ENST00000412104 COL15A1P39059 1388 aa29.93■■■□□ 2.38
VRK2-202ENST00000412104 PTCD1O75127 700 aaKnown RBP29.93■■■□□ 2.38
VRK2-202ENST00000412104 SASH1O94885 1247 aa29.93■■■□□ 2.38
VRK2-202ENST00000412104 ATP5J2-PTCD1G3V325 749 aa29.92■■■□□ 2.38
VRK2-202ENST00000412104 IFIT2P09913 472 aaKnown RBP29.92■■■□□ 2.38
VRK2-202ENST00000412104 COL16A1Q07092 1604 aaPredicted RBP29.92■■■□□ 2.38
VRK2-202ENST00000412104 ST18O60284 1047 aa29.92■■■□□ 2.38
VRK2-202ENST00000412104 GPATCH3Q96I76 525 aa29.92■■■□□ 2.38
VRK2-202ENST00000412104 ECHDC1Q9NTX5 307 aa29.92■■■□□ 2.38
VRK2-202ENST00000412104 FOXD4L1Q9NU39 408 aa29.92■■■□□ 2.38
VRK2-202ENST00000412104 MCCP23508 829 aa29.91■■■□□ 2.38
VRK2-202ENST00000412104 UBE3BQ7Z3V4 1068 aa29.91■■■□□ 2.38
VRK2-202ENST00000412104 AACSQ86V21 672 aa29.91■■■□□ 2.38
VRK2-202ENST00000412104 IL25Q9H293 177 aa29.91■■■□□ 2.38
VRK2-202ENST00000412104 TMOD3Q9NYL9 352 aa29.91■■■□□ 2.38
VRK2-202ENST00000412104 A1BGP04217 495 aa29.9■■■□□ 2.38
VRK2-202ENST00000412104 JARID2Q92833 1246 aaPredicted RBP29.9■■■□□ 2.38
VRK2-202ENST00000412104 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.9■■■□□ 2.38
VRK2-202ENST00000412104 DISP2A7MBM2 1401 aa29.9■■■□□ 2.38
VRK2-202ENST00000412104 PLCH1Q4KWH8 1693 aa29.9■■■□□ 2.38
VRK2-202ENST00000412104 MCM4P33991 863 aa29.89■■■□□ 2.38
VRK2-202ENST00000412104 KLHDC4Q8TBB5 520 aa29.89■■■□□ 2.38
VRK2-202ENST00000412104 SIL1Q9H173 461 aa29.89■■■□□ 2.38
VRK2-202ENST00000412104 A0A087WZG4 1122 aa29.88■■■□□ 2.37
VRK2-202ENST00000412104 TTLL7Q6ZT98 887 aa29.88■■■□□ 2.37
VRK2-202ENST00000412104 EPB41L2O43491 1005 aaKnown RBP29.88■■■□□ 2.37
VRK2-202ENST00000412104 RABL6Q3YEC7 729 aaPredicted RBP29.88■■■□□ 2.37
VRK2-202ENST00000412104 TJP1Q07157 1748 aa29.88■■■□□ 2.37
VRK2-202ENST00000412104 CASP7P55210 303 aa29.87■■■□□ 2.37
VRK2-202ENST00000412104 EAF2Q96CJ1 260 aaPredicted RBP29.87■■■□□ 2.37
VRK2-202ENST00000412104 ITGB4P16144 1822 aa29.87■■■□□ 2.37
VRK2-202ENST00000412104 ANAPC15P60006 121 aa29.86■■■□□ 2.37
VRK2-202ENST00000412104 PALD1Q9ULE6 856 aa29.86■■■□□ 2.37
VRK2-202ENST00000412104 SGSM2O43147 1006 aa29.86■■■□□ 2.37
VRK2-202ENST00000412104 COPRSQ9NQ92 184 aa29.86■■■□□ 2.37
VRK2-202ENST00000412104 RFX5P48382 616 aaPredicted RBP29.85■■■□□ 2.37
VRK2-202ENST00000412104 RAB3GAP1Q15042 981 aa29.85■■■□□ 2.37
VRK2-202ENST00000412104 WNK3Q9BYP7 1800 aa29.84■■■□□ 2.37
VRK2-202ENST00000412104 IL17RAQ96F46 866 aa29.84■■■□□ 2.37
VRK2-202ENST00000412104 PIGBQ92521 554 aa29.83■■■□□ 2.37
VRK2-202ENST00000412104 TNPO1Q92973 898 aaKnown RBP29.83■■■□□ 2.37
VRK2-202ENST00000412104 CCDC8Q9H0W5 538 aaPredicted RBP29.83■■■□□ 2.37
VRK2-202ENST00000412104 PTPN12Q05209 780 aaKnown RBP29.82■■■□□ 2.36
VRK2-202ENST00000412104 RAD50Q92878 1312 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 LTBP4Q8N2S1 1624 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 H7C1W4 665 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 ZBTB3Q9H5J0 574 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 CWC25Q9NXE8 425 aaPredicted RBP29.81■■■□□ 2.36
VRK2-202ENST00000412104 TLR7Q9NYK1 1049 aaKnown RBP29.81■■■□□ 2.36
VRK2-202ENST00000412104 ASAP1Q9ULH1 1129 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 LRP6O75581 1613 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 NEK4P51957 841 aa29.81■■■□□ 2.36
VRK2-202ENST00000412104 HSPA4P34932 840 aa29.8■■■□□ 2.36
VRK2-202ENST00000412104 CWC27Q6UX04 472 aaKnown RBP29.8■■■□□ 2.36
VRK2-202ENST00000412104 EVI5LQ96CN4 794 aa29.79■■■□□ 2.36
VRK2-202ENST00000412104 VSIG10Q8N0Z9 540 aa29.79■■■□□ 2.36
VRK2-202ENST00000412104 LSG1Q9H089 658 aaKnown RBP29.79■■■□□ 2.36
VRK2-202ENST00000412104 DIAPH3Q9NSV4 1193 aa29.79■■■□□ 2.36
VRK2-202ENST00000412104 ATG3Q9NT62 314 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms