RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 EXOSC9Q06265 439 aaKnown RBP30.8■■■□□ 2.52
UBE2E3-202ENST00000410062 KIF6Q6ZMV9 814 aa30.8■■■□□ 2.52
UBE2E3-202ENST00000410062 HLFQ16534 295 aa30.79■■■□□ 2.52
UBE2E3-202ENST00000410062 AIMP1Q12904 312 aaKnown RBP30.79■■■□□ 2.52
UBE2E3-202ENST00000410062 ZBTB3Q9H5J0 574 aa30.79■■■□□ 2.52
UBE2E3-202ENST00000410062 ZNF652Q9Y2D9 606 aa30.79■■■□□ 2.52
UBE2E3-202ENST00000410062 MAP3K15Q6ZN16 1313 aa30.79■■■□□ 2.52
UBE2E3-202ENST00000410062 CLEC4GQ6UXB4 293 aa30.78■■■□□ 2.52
UBE2E3-202ENST00000410062 COPS6Q7L5N1 327 aa30.78■■■□□ 2.52
UBE2E3-202ENST00000410062 XAGE3Q8WTP9 111 aa30.78■■■□□ 2.52
UBE2E3-202ENST00000410062 CCDC30Q5VVM6 783 aa30.76■■■□□ 2.52
UBE2E3-202ENST00000410062 NLGN2Q8NFZ4 835 aa30.76■■■□□ 2.52
UBE2E3-202ENST00000410062 CDCA7LQ96GN5 454 aa30.76■■■□□ 2.52
UBE2E3-202ENST00000410062 CD2APQ9Y5K6 639 aa30.76■■■□□ 2.52
UBE2E3-202ENST00000410062 ERVV-1B6SEH8 477 aa30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 AFDNP55196 1824 aaKnown RBP30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 E9PSI1 815 aa30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 TCERG1O14776 1098 aaKnown RBP30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 SERPINB2P05120 415 aa30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 HNRNPUQ00839 825 aaKnown RBP eCLIP30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 SETDB2Q96T68 719 aa30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 HYPKQ9NX55 129 aa30.75■■■□□ 2.51
UBE2E3-202ENST00000410062 NUP98P52948 1817 aa30.74■■■□□ 2.51
UBE2E3-202ENST00000410062 SLFN5Q08AF3 891 aa30.74■■■□□ 2.51
UBE2E3-202ENST00000410062 RGL2O15211 777 aa30.73■■■□□ 2.51
UBE2E3-202ENST00000410062 VAMP4O75379 141 aa30.73■■■□□ 2.51
UBE2E3-202ENST00000410062 CHMP4AQ9BY43 222 aa30.73■■■□□ 2.51
UBE2E3-202ENST00000410062 CARMIL3Q8ND23 1372 aa30.72■■■□□ 2.51
UBE2E3-202ENST00000410062 NIP7Q9Y221 180 aaKnown RBP eCLIP30.72■■■□□ 2.51
UBE2E3-202ENST00000410062 C10orf71Q711Q0 1435 aa30.72■■■□□ 2.51
UBE2E3-202ENST00000410062 PHAXQ9H814 394 aaKnown RBP30.71■■■□□ 2.51
UBE2E3-202ENST00000410062 GOLGB1Q14789 3259 aaKnown RBP30.71■■■□□ 2.51
UBE2E3-202ENST00000410062 NRXN2Q9P2S2 1712 aa30.71■■■□□ 2.51
UBE2E3-202ENST00000410062 KIF13BQ9NQT8 1826 aa30.7■■■□□ 2.51
UBE2E3-202ENST00000410062 GIGYF2Q6Y7W6 1299 aaKnown RBP30.7■■■□□ 2.5
UBE2E3-202ENST00000410062 STK31Q9BXU1 1019 aa30.69■■■□□ 2.5
UBE2E3-202ENST00000410062 GPTP24298 496 aa30.67■■■□□ 2.5
UBE2E3-202ENST00000410062 ATP10DQ9P241 1426 aa30.66■■■□□ 2.5
UBE2E3-202ENST00000410062 FAM177BA6PVY3 158 aa30.66■■■□□ 2.5
UBE2E3-202ENST00000410062 ANKRD13DQ6ZTN6 518 aa30.66■■■□□ 2.5
UBE2E3-202ENST00000410062 CCDC24Q8N4L8 307 aa30.66■■■□□ 2.5
UBE2E3-202ENST00000410062 SLC4A2P04920 1241 aa30.65■■■□□ 2.5
UBE2E3-202ENST00000410062 PRR5LQ6MZQ0 368 aa30.65■■■□□ 2.5
UBE2E3-202ENST00000410062 TRMT2AQ8IZ69 625 aaKnown RBP30.65■■■□□ 2.5
UBE2E3-202ENST00000410062 PLBD2Q8NHP8 589 aa30.65■■■□□ 2.5
UBE2E3-202ENST00000410062 NBPF5PQ86XG9 351 aaPredicted RBP30.64■■■□□ 2.5
UBE2E3-202ENST00000410062 NPHP1O15259 732 aa30.63■■■□□ 2.49
UBE2E3-202ENST00000410062 ZNF34Q8IZ26 560 aa30.63■■■□□ 2.49
UBE2E3-202ENST00000410062 CNBD1Q8NA66 436 aa30.63■■■□□ 2.49
UBE2E3-202ENST00000410062 UBN2Q6ZU65 1347 aa30.63■■■□□ 2.49
UBE2E3-202ENST00000410062 PXDNLA1KZ92 1463 aa30.63■■■□□ 2.49
UBE2E3-202ENST00000410062 N4BP2Q86UW6 1770 aaPredicted RBP30.63■■■□□ 2.49
UBE2E3-202ENST00000410062 KIAA1551Q9HCM1 1747 aa30.62■■■□□ 2.49
UBE2E3-202ENST00000410062 UTRNP46939 3433 aa30.62■■■□□ 2.49
UBE2E3-202ENST00000410062 A0A0G2JLW4 131 aa30.62■■■□□ 2.49
UBE2E3-202ENST00000410062 TGFB2P61812 414 aa30.62■■■□□ 2.49
UBE2E3-202ENST00000410062 G2E3Q7L622 706 aa30.62■■■□□ 2.49
UBE2E3-202ENST00000410062 WWC3Q9ULE0 1092 aa30.61■■■□□ 2.49
UBE2E3-202ENST00000410062 RIC3Q7Z5B4 369 aa30.6■■■□□ 2.49
UBE2E3-202ENST00000410062 ANKRD36CQ5JPF3 1778 aa30.6■■■□□ 2.49
UBE2E3-202ENST00000410062 ARFGEF2Q9Y6D5 1785 aa30.59■■■□□ 2.49
UBE2E3-202ENST00000410062 DPEP1P16444 411 aa30.59■■■□□ 2.49
UBE2E3-202ENST00000410062 TCIRG1Q13488 830 aa30.59■■■□□ 2.49
UBE2E3-202ENST00000410062 HSP90AB3PQ58FF7 597 aa30.59■■■□□ 2.49
UBE2E3-202ENST00000410062 TPTE2Q6XPS3 522 aa30.59■■■□□ 2.49
UBE2E3-202ENST00000410062 SUSD4Q5VX71 490 aa30.58■■■□□ 2.49
UBE2E3-202ENST00000410062 PELP1Q8IZL8 1130 aaKnown RBP30.58■■■□□ 2.49
UBE2E3-202ENST00000410062 CHRNA5P30532 468 aa30.58■■■□□ 2.49
UBE2E3-202ENST00000410062 ST5P78524 1137 aa30.58■■■□□ 2.49
UBE2E3-202ENST00000410062 ANKRD31Q8N7Z5 1873 aa30.57■■■□□ 2.48
UBE2E3-202ENST00000410062 CACNA1FO60840 1977 aa30.57■■■□□ 2.48
UBE2E3-202ENST00000410062 DDX58O95786 925 aaKnown RBP30.56■■■□□ 2.48
UBE2E3-202ENST00000410062 GTF2E1P29083 439 aaPredicted RBP30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 FLIIQ13045 1269 aa30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 PARP10Q53GL7 1025 aa30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 NUTM1Q86Y26 1132 aa30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 ZNF428Q96B54 188 aa30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 BRIP1Q9BX63 1249 aa30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 NYXQ9GZU5 481 aa30.55■■■□□ 2.48
UBE2E3-202ENST00000410062 ZBED9Q6R2W3 1325 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 ATP5J2-PTCD1G3V325 749 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 KCNA3P22001 575 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 GPR162Q16538 588 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 PI4KAP2A4QPH2 592 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 DCAF8L1A6NGE4 600 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 NLRP10Q86W26 655 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 PI4KAP1Q8N8J0 262 aa30.54■■■□□ 2.48
UBE2E3-202ENST00000410062 NTSR2O95665 410 aa30.53■■■□□ 2.48
UBE2E3-202ENST00000410062 KSR2Q6VAB6 950 aa30.53■■■□□ 2.48
UBE2E3-202ENST00000410062 PPP1R42Q7Z4L9 355 aa30.53■■■□□ 2.48
UBE2E3-202ENST00000410062 MAP3K2Q9Y2U5 619 aa30.53■■■□□ 2.48
UBE2E3-202ENST00000410062 ADCY9O60503 1353 aa30.52■■■□□ 2.48
UBE2E3-202ENST00000410062 YBX3P16989 372 aaKnown RBP eCLIP30.52■■■□□ 2.486e-8■□□□□ 9.7
UBE2E3-202ENST00000410062 ERFEQ4G0M1 354 aa30.52■■■□□ 2.48
UBE2E3-202ENST00000410062 C2CD5Q86YS7 1000 aa30.52■■■□□ 2.48
UBE2E3-202ENST00000410062 MYD88Q99836 296 aa30.52■■■□□ 2.48
UBE2E3-202ENST00000410062 ISCA1Q9BUE6 129 aa30.52■■■□□ 2.48
UBE2E3-202ENST00000410062 IBTKQ9P2D0 1353 aaPredicted RBP30.51■■■□□ 2.48
UBE2E3-202ENST00000410062 PDE6BP35913 854 aa30.51■■■□□ 2.47
UBE2E3-202ENST00000410062 FKBP5Q13451 457 aaPredicted RBP30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms