RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 BTBD11A6QL63 1104 aa15.75■□□□□ 0.11
SERF2-210ENST00000409960 CNBD1Q8NA66 436 aa15.75■□□□□ 0.11
SERF2-210ENST00000409960 ZNF622Q969S3 477 aaKnown RBP eCLIP15.75■□□□□ 0.113e-29■□□□□ 10.7
SERF2-210ENST00000409960 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
SERF2-210ENST00000409960 DICER1Q9UPY3 1922 aaKnown RBP15.74■□□□□ 0.11
SERF2-210ENST00000409960 NFKBIEO00221 500 aa15.74■□□□□ 0.11
SERF2-210ENST00000409960 ST5P78524 1137 aa15.74■□□□□ 0.11
SERF2-210ENST00000409960 SOGA3Q5TF21 947 aa15.74■□□□□ 0.11
SERF2-210ENST00000409960 PRR5LQ6MZQ0 368 aa15.74■□□□□ 0.11
SERF2-210ENST00000409960 CNKSR1Q969H4 720 aa15.74■□□□□ 0.11
SERF2-210ENST00000409960 FER1L6Q2WGJ9 1857 aa15.74■□□□□ 0.11
SERF2-210ENST00000409960 LTBP3Q9NS15 1303 aa15.73■□□□□ 0.11
SERF2-210ENST00000409960 BCORQ6W2J9 1755 aa15.73■□□□□ 0.11
SERF2-210ENST00000409960 PRKAR2BP31323 418 aa15.73■□□□□ 0.11
SERF2-210ENST00000409960 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
SERF2-210ENST00000409960 COL11A2P13942 1736 aaPredicted RBP15.72■□□□□ 0.11
SERF2-210ENST00000409960 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 A1BGP04217 495 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 PRELPP51888 382 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
SERF2-210ENST00000409960 STYK1Q6J9G0 422 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
SERF2-210ENST00000409960 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
SERF2-210ENST00000409960 RGL2O15211 777 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 C21orf2O43822 256 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 HTRA3P83110 453 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 PHACTR3Q96KR7 559 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
SERF2-210ENST00000409960 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
SERF2-210ENST00000409960 MASTLQ96GX5 879 aa15.7■□□□□ 0.1
SERF2-210ENST00000409960 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
SERF2-210ENST00000409960 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
SERF2-210ENST00000409960 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
SERF2-210ENST00000409960 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
SERF2-210ENST00000409960 SRGNP10124 158 aa15.69■□□□□ 0.1
SERF2-210ENST00000409960 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
SERF2-210ENST00000409960 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
SERF2-210ENST00000409960 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
SERF2-210ENST00000409960 PRPF40BQ6NWY9 871 aaKnown RBP15.68■□□□□ 0.1
SERF2-210ENST00000409960 NBPF5PQ86XG9 351 aaPredicted RBP15.68■□□□□ 0.1
SERF2-210ENST00000409960 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
SERF2-210ENST00000409960 CACNA1SQ13698 1873 aa15.67■□□□□ 0.1
SERF2-210ENST00000409960 SLX4Q8IY92 1834 aa15.67■□□□□ 0.1
SERF2-210ENST00000409960 KCNQ3O43525 872 aa15.67■□□□□ 0.1
SERF2-210ENST00000409960 CCDC24Q8N4L8 307 aa15.67■□□□□ 0.1
SERF2-210ENST00000409960 NEFMP07197 916 aa15.66■□□□□ 0.1
SERF2-210ENST00000409960 NPR1P16066 1061 aa15.66■□□□□ 0.1
SERF2-210ENST00000409960 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
SERF2-210ENST00000409960 IQCA1LA6NCM1 817 aa15.65■□□□□ 0.1
SERF2-210ENST00000409960 POTECB2RU33 542 aa15.65■□□□□ 0.1
SERF2-210ENST00000409960 PPP2R1AP30153 589 aa15.65■□□□□ 0.1
SERF2-210ENST00000409960 CCDC93Q567U6 631 aa15.65■□□□□ 0.1
SERF2-210ENST00000409960 MCM10Q7L590 875 aa15.65■□□□□ 0.1
SERF2-210ENST00000409960 TAF7Q15545 349 aaPredicted RBP15.64■□□□□ 0.09
SERF2-210ENST00000409960 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
SERF2-210ENST00000409960 SCN4AP35499 1836 aa15.64■□□□□ 0.09
SERF2-210ENST00000409960 LAMB4A4D0S4 1761 aa15.63■□□□□ 0.09
SERF2-210ENST00000409960 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
SERF2-210ENST00000409960 NIP7Q9Y221 180 aaKnown RBP eCLIP15.63■□□□□ 0.09
SERF2-210ENST00000409960 PCNTO95613 3336 aa15.62■□□□□ 0.09
SERF2-210ENST00000409960 PRAMEF22A3QJZ6 481 aa15.62■□□□□ 0.09
SERF2-210ENST00000409960 ALDH1B1P30837 517 aa15.62■□□□□ 0.09
SERF2-210ENST00000409960 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
SERF2-210ENST00000409960 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
SERF2-210ENST00000409960 PNISRQ8TF01 805 aaKnown RBP15.62■□□□□ 0.09
SERF2-210ENST00000409960 C7orf43Q8WVR3 580 aa15.62■□□□□ 0.09
SERF2-210ENST00000409960 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
SERF2-210ENST00000409960 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
SERF2-210ENST00000409960 DDNO94850 711 aaPredicted RBP15.61■□□□□ 0.09
SERF2-210ENST00000409960 GTF2E1P29083 439 aaPredicted RBP15.61■□□□□ 0.09
SERF2-210ENST00000409960 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
SERF2-210ENST00000409960 COL13A1Q5TAT6 717 aaPredicted RBP15.61■□□□□ 0.09
SERF2-210ENST00000409960 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
SERF2-210ENST00000409960 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
SERF2-210ENST00000409960 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
SERF2-210ENST00000409960 LDHDQ86WU2 507 aa15.6■□□□□ 0.09
SERF2-210ENST00000409960 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
SERF2-210ENST00000409960 NYXQ9GZU5 481 aa15.6■□□□□ 0.09
SERF2-210ENST00000409960 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
SERF2-210ENST00000409960 HSPA1AP0DMV8 641 aaKnown RBP15.59■□□□□ 0.09
SERF2-210ENST00000409960 HSPA1BP0DMV9 641 aaKnown RBP15.59■□□□□ 0.09
SERF2-210ENST00000409960 TNS4Q8IZW8 715 aa15.59■□□□□ 0.09
SERF2-210ENST00000409960 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
SERF2-210ENST00000409960 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
SERF2-210ENST00000409960 KDM3BQ7LBC6 1761 aa15.57■□□□□ 0.08
SERF2-210ENST00000409960 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
SERF2-210ENST00000409960 GRIPAP1Q4V328 841 aa15.57■□□□□ 0.08
SERF2-210ENST00000409960 CC2D2BQ6DHV5 1058 aa15.57■□□□□ 0.08
SERF2-210ENST00000409960 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
SERF2-210ENST00000409960 HLFQ16534 295 aa15.56■□□□□ 0.08
SERF2-210ENST00000409960 CRY2Q49AN0 593 aa15.56■□□□□ 0.08
SERF2-210ENST00000409960 KIF6Q6ZMV9 814 aa15.56■□□□□ 0.08
SERF2-210ENST00000409960 PNMA8AQ86V59 439 aaPredicted RBP15.56■□□□□ 0.08
SERF2-210ENST00000409960 ZNF277Q9NRM2 450 aaPredicted RBP15.56■□□□□ 0.08
SERF2-210ENST00000409960 HACL1Q9UJ83 578 aa15.56■□□□□ 0.08
SERF2-210ENST00000409960 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms