RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 BICC1Q9H694 974 aaKnown RBP16.06■□□□□ 0.16
COL6A2-204ENST00000409416 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
COL6A2-204ENST00000409416 USP6P35125 1406 aa16.06■□□□□ 0.16
COL6A2-204ENST00000409416 A0A087WZG4 1122 aa16.06■□□□□ 0.16
COL6A2-204ENST00000409416 CRB1P82279 1406 aa16.06■□□□□ 0.16
COL6A2-204ENST00000409416 GADD45BO75293 160 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-204ENST00000409416 SPC24Q8NBT2 197 aa16.06■□□□□ 0.16
COL6A2-204ENST00000409416 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-204ENST00000409416 ZNF445P59923 1031 aa16.05■□□□□ 0.16
COL6A2-204ENST00000409416 GPATCH3Q96I76 525 aa16.05■□□□□ 0.16
COL6A2-204ENST00000409416 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
COL6A2-204ENST00000409416 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-204ENST00000409416 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-204ENST00000409416 CYP2E1P05181 493 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-204ENST00000409416 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
COL6A2-204ENST00000409416 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-204ENST00000409416 MAP3K5Q99683 1374 aa16.05■□□□□ 0.16
COL6A2-204ENST00000409416 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
COL6A2-204ENST00000409416 HAND2P61296 217 aa16.04■□□□□ 0.16
COL6A2-204ENST00000409416 DRC7Q8IY82 874 aa16.04■□□□□ 0.16
COL6A2-204ENST00000409416 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
COL6A2-204ENST00000409416 ZNF496Q96IT1 587 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-204ENST00000409416 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-204ENST00000409416 APPP05067 770 aa16.04■□□□□ 0.16
COL6A2-204ENST00000409416 EIF4A1P60842 406 aaKnown RBP16.04■□□□□ 0.16
COL6A2-204ENST00000409416 KIF1BPQ96EK5 621 aa16.04■□□□□ 0.16
COL6A2-204ENST00000409416 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
COL6A2-204ENST00000409416 MCM2P49736 904 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 MBD3O95983 291 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 A1BGP04217 495 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-204ENST00000409416 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
COL6A2-204ENST00000409416 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-204ENST00000409416 TIMM10P62072 90 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 IP6K1Q92551 441 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
COL6A2-204ENST00000409416 SBNO1A3KN83 1393 aa16.02■□□□□ 0.16
COL6A2-204ENST00000409416 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
COL6A2-204ENST00000409416 NPHP1O15259 732 aa16.02■□□□□ 0.15
COL6A2-204ENST00000409416 PTH1RQ03431 593 aa16.02■□□□□ 0.15
COL6A2-204ENST00000409416 USP48Q86UV5 1035 aa16.02■□□□□ 0.15
COL6A2-204ENST00000409416 ADAMTS2O95450 1211 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 CCT2P78371 535 aaKnown RBP16.01■□□□□ 0.15
COL6A2-204ENST00000409416 OSBPL3Q9H4L5 887 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 RIMS1Q86UR5 1692 aaKnown RBP16.01■□□□□ 0.15
COL6A2-204ENST00000409416 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 RAB11FIP3O75154 756 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 AK2P54819 239 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 CLEC17AQ6ZS10 378 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 ARHGEF10O15013 1369 aa16.01■□□□□ 0.15
COL6A2-204ENST00000409416 ADCK5Q3MIX3 580 aa16■□□□□ 0.15
COL6A2-204ENST00000409416 PDZRN4Q6ZMN7 1036 aaPredicted RBP16■□□□□ 0.15
COL6A2-204ENST00000409416 BRD1O95696 1058 aa16■□□□□ 0.15
COL6A2-204ENST00000409416 PDRG1Q9NUG6 133 aa16■□□□□ 0.15
COL6A2-204ENST00000409416 MTMR7Q9Y216 660 aa16■□□□□ 0.15
COL6A2-204ENST00000409416 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
COL6A2-204ENST00000409416 RRP9O43818 475 aaKnown RBP16■□□□□ 0.15
COL6A2-204ENST00000409416 SLC4A8Q2Y0W8 1093 aa16■□□□□ 0.15
COL6A2-204ENST00000409416 CKAP2LQ8IYA6 745 aa16■□□□□ 0.15
COL6A2-204ENST00000409416 IQSEC3Q9UPP2 1182 aaPredicted RBP16■□□□□ 0.15
COL6A2-204ENST00000409416 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 GOLIM4O00461 696 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 HELBQ8NG08 1087 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-204ENST00000409416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-204ENST00000409416 IGSF1Q8N6C5 1336 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 WDR33Q9C0J8 1336 aaKnown RBP15.99■□□□□ 0.15
COL6A2-204ENST00000409416 H3BQV1 296 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 IFFO2Q5TF58 517 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 CCDC82Q8N4S0 544 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 ATP2B1P20020 1258 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 NMIQ13287 307 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-204ENST00000409416 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
COL6A2-204ENST00000409416 GIMAP6Q6P9H5 292 aa15.98■□□□□ 0.15
COL6A2-204ENST00000409416 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
COL6A2-204ENST00000409416 GRM8O00222 908 aa15.98■□□□□ 0.15
COL6A2-204ENST00000409416 BICD2Q8TD16 824 aa15.98■□□□□ 0.15
COL6A2-204ENST00000409416 GOLGB1Q14789 3259 aaKnown RBP15.98■□□□□ 0.15
COL6A2-204ENST00000409416 CEP170BQ9Y4F5 1589 aaPredicted RBP15.97■□□□□ 0.15
COL6A2-204ENST00000409416 LARGE1O95461 756 aa15.97■□□□□ 0.15
COL6A2-204ENST00000409416 TFCP2Q12800 502 aa15.97■□□□□ 0.15
COL6A2-204ENST00000409416 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
COL6A2-204ENST00000409416 EAF2Q96CJ1 260 aaPredicted RBP15.97■□□□□ 0.15
COL6A2-204ENST00000409416 ECHDC1Q9NTX5 307 aa15.97■□□□□ 0.15
COL6A2-204ENST00000409416 A0A087WWV3 80 aa15.97■□□□□ 0.15
COL6A2-204ENST00000409416 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
COL6A2-204ENST00000409416 KCNQ4P56696 695 aa15.97■□□□□ 0.15
COL6A2-204ENST00000409416 DNM1Q05193 864 aaKnown RBP15.97■□□□□ 0.15
COL6A2-204ENST00000409416 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms