RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 NDUFB9Q9Y6M9 179 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 NRXN3Q9Y4C0 1643 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 BOLA2Q9H3K6 86 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 CKAP2LQ8IYA6 745 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.18■□□□□ 0.82
SYNC-202ENST00000409190 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
SYNC-202ENST00000409190 MAP3K2Q9Y2U5 619 aa20.17■□□□□ 0.82
SYNC-202ENST00000409190 C3P01024 1663 aa20.17■□□□□ 0.82
SYNC-202ENST00000409190 SASS6Q6UVJ0 657 aa20.17■□□□□ 0.82
SYNC-202ENST00000409190 EDC3Q96F86 508 aaKnown RBP20.17■□□□□ 0.82
SYNC-202ENST00000409190 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
SYNC-202ENST00000409190 RAB11FIP3O75154 756 aa20.16■□□□□ 0.82
SYNC-202ENST00000409190 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
SYNC-202ENST00000409190 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
SYNC-202ENST00000409190 TTC14Q96N46 770 aa20.16■□□□□ 0.82
SYNC-202ENST00000409190 TAOK2Q9UL54 1235 aa20.16■□□□□ 0.82
SYNC-202ENST00000409190 USP31Q70CQ4 1352 aa20.16■□□□□ 0.82
SYNC-202ENST00000409190 ADAMTS13Q76LX8 1427 aa20.16■□□□□ 0.82
SYNC-202ENST00000409190 ITSN1Q15811 1721 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 BEND3Q5T5X7 828 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 CYP46A1Q9Y6A2 500 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 TAF6LQ9Y6J9 622 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 KCNA6P17658 529 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 UBE2HP62256 183 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 NOLC1Q14978 699 aaKnown RBP eCLIP20.15■□□□□ 0.82
SYNC-202ENST00000409190 ME3Q16798 604 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 TTC21AQ8NDW8 1320 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 MON2Q7Z3U7 1717 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
SYNC-202ENST00000409190 LARP1BQ659C4 914 aaKnown RBP20.15■□□□□ 0.82
SYNC-202ENST00000409190 HYPKQ9NX55 129 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 PTPRUQ92729 1446 aa20.15■□□□□ 0.82
SYNC-202ENST00000409190 TLR7Q9NYK1 1049 aaKnown RBP20.14■□□□□ 0.82
SYNC-202ENST00000409190 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.81
SYNC-202ENST00000409190 CEBPZQ03701 1054 aaKnown RBP20.14■□□□□ 0.81
SYNC-202ENST00000409190 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.81
SYNC-202ENST00000409190 KDRP35968 1356 aa20.14■□□□□ 0.81
SYNC-202ENST00000409190 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
SYNC-202ENST00000409190 AP5Z1O43299 807 aa20.13■□□□□ 0.81
SYNC-202ENST00000409190 POLA2Q14181 598 aa20.13■□□□□ 0.81
SYNC-202ENST00000409190 MTMR6Q9Y217 621 aa20.13■□□□□ 0.81
SYNC-202ENST00000409190 RBM8AQ9Y5S9 174 aaKnown RBP20.13■□□□□ 0.81
SYNC-202ENST00000409190 CHGBP05060 677 aa20.13■□□□□ 0.81
SYNC-202ENST00000409190 GOLGA6L4A6NEF3 574 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 ZKSCAN1P17029 563 aaPredicted RBP20.12■□□□□ 0.81
SYNC-202ENST00000409190 CDC37L1Q7L3B6 337 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 DRC7Q8IY82 874 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 MYL6BP14649 208 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 FSD1Q9BTV5 496 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.12■□□□□ 0.81
SYNC-202ENST00000409190 NMIQ13287 307 aaPredicted RBP20.12■□□□□ 0.81
SYNC-202ENST00000409190 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 TPCN1Q9ULQ1 816 aa20.12■□□□□ 0.81
SYNC-202ENST00000409190 MCM5P33992 734 aa20.11■□□□□ 0.81
SYNC-202ENST00000409190 RUFY2Q8WXA3 655 aa20.11■□□□□ 0.81
SYNC-202ENST00000409190 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
SYNC-202ENST00000409190 FBXW7Q969H0 707 aa20.11■□□□□ 0.81
SYNC-202ENST00000409190 ATP6V1DQ9Y5K8 247 aa20.11■□□□□ 0.81
SYNC-202ENST00000409190 TECPR2O15040 1411 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 KDM4AO75164 1064 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 LIG1P18858 919 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 LUZP1Q86V48 1076 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 LRRC2Q9BYS8 371 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 HTATSF1O43719 755 aaKnown RBP20.1■□□□□ 0.81
SYNC-202ENST00000409190 PYCARDQ9ULZ3 195 aa20.1■□□□□ 0.81
SYNC-202ENST00000409190 ST3GAL1Q11201 340 aa20.09■□□□□ 0.81
SYNC-202ENST00000409190 SLC39A6Q13433 755 aa20.09■□□□□ 0.81
SYNC-202ENST00000409190 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
SYNC-202ENST00000409190 CREB3L3Q68CJ9 461 aa20.09■□□□□ 0.81
SYNC-202ENST00000409190 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
SYNC-202ENST00000409190 EAF2Q96CJ1 260 aaPredicted RBP20.09■□□□□ 0.81
SYNC-202ENST00000409190 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.81
SYNC-202ENST00000409190 ESCO1Q5FWF5 840 aa20.08■□□□□ 0.81
SYNC-202ENST00000409190 GPATCH3Q96I76 525 aa20.08■□□□□ 0.81
SYNC-202ENST00000409190 NRKQ7Z2Y5 1582 aa20.08■□□□□ 0.81
SYNC-202ENST00000409190 A0A0D9SFI3 127 aa20.08■□□□□ 0.8
SYNC-202ENST00000409190 DYNC1I1O14576 645 aa20.08■□□□□ 0.8
SYNC-202ENST00000409190 PSME1Q06323 249 aa20.08■□□□□ 0.8
SYNC-202ENST00000409190 HSP90AB4PQ58FF6 505 aa20.08■□□□□ 0.8
SYNC-202ENST00000409190 BICC1Q9H694 974 aaKnown RBP20.08■□□□□ 0.8
SYNC-202ENST00000409190 PIBF1Q8WXW3 757 aa20.07■□□□□ 0.8
SYNC-202ENST00000409190 SUCLG2Q96I99 432 aa20.07■□□□□ 0.8
SYNC-202ENST00000409190 AOX1Q06278 1338 aa20.07■□□□□ 0.8
SYNC-202ENST00000409190 AKAP12Q02952 1782 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 C1orf141Q5JVX7 400 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 CCDC171Q6TFL3 1326 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 A0A087WWV3 80 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 HSP90B1P14625 803 aaKnown RBP20.06■□□□□ 0.8
SYNC-202ENST00000409190 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 CBX1P83916 185 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 FGD1P98174 961 aa20.06■□□□□ 0.8
SYNC-202ENST00000409190 PTGS1P23219 599 aa20.05■□□□□ 0.8
SYNC-202ENST00000409190 LARP1Q6PKG0 1096 aaKnown RBP20.05■□□□□ 0.8
SYNC-202ENST00000409190 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
SYNC-202ENST00000409190 ADCY9O60503 1353 aa20.05■□□□□ 0.8
SYNC-202ENST00000409190 BLOC1S2Q6QNY1 142 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms