RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FOXR1Q6PIV2 292 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 HCN4Q9Y3Q4 1203 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 ARSJQ5FYB0 599 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P13-201ENST00000406019 ALDH16A1Q8IZ83 802 aa9.07□□□□□ -0.96
HMGB1P13-201ENST00000406019 IGF1RP08069 1367 aa9.07□□□□□ -0.96
HMGB1P13-201ENST00000406019 ATXN7O15265 892 aaPredicted RBP9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 FOXO3O43524 673 aa9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 FIGNL1Q6PIW4 674 aa9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 STK17AQ9UEE5 414 aa9.06□□□□□ -0.96
HMGB1P13-201ENST00000406019 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 ZNF280CQ8ND82 737 aa9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 HSH2DQ96JZ2 352 aa9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 QTRT2Q9H974 415 aaKnown RBP9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 BCS1LQ9Y276 419 aa9.05□□□□□ -0.96
HMGB1P13-201ENST00000406019 ARHGEF15O94989 841 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 MAPTP10636 758 aaKnown RBP9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 FGFR3P22607 806 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 CTBSQ01459 385 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 LYPD4Q6UWN0 246 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 RHPN1Q8TCX5 695 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 ACDQ96AP0 544 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 PRIMPOLQ96LW4 560 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 PHF24Q9UPV7 400 aa9.04□□□□□ -0.96
HMGB1P13-201ENST00000406019 MX2P20592 715 aa9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 TRIM26Q12899 539 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 RTN1Q16799 776 aa9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 FAM182BQ5T319 152 aa9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 BICDL1Q6ZP65 573 aa9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 SUSD3Q96L08 255 aa9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 DMGDHQ9UI17 866 aaKnown RBP9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 CHMP3Q9Y3E7 222 aa9.03□□□□□ -0.96
HMGB1P13-201ENST00000406019 DCDC2BA2VCK2 349 aa9.02□□□□□ -0.97
HMGB1P13-201ENST00000406019 PRMT3O60678 531 aa9.02□□□□□ -0.97
HMGB1P13-201ENST00000406019 MYO19Q96H55 970 aa9.02□□□□□ -0.97
HMGB1P13-201ENST00000406019 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P13-201ENST00000406019 TYRO3Q06418 890 aa9.01□□□□□ -0.97
HMGB1P13-201ENST00000406019 LAMC2Q13753 1193 aa9.01□□□□□ -0.97
HMGB1P13-201ENST00000406019 GRIN2CQ14957 1233 aa9.01□□□□□ -0.97
HMGB1P13-201ENST00000406019 CD33P20138 364 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 GRNP28799 593 aaKnown RBP9□□□□□ -0.97
HMGB1P13-201ENST00000406019 MAP2K3P46734 347 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 IER5Q5VY09 327 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 NGLY1Q96IV0 654 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 KLF15Q9UIH9 416 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 LRFN2Q9ULH4 789 aa9□□□□□ -0.97
HMGB1P13-201ENST00000406019 KHNYNO15037 678 aaKnown RBP8.99□□□□□ -0.97
HMGB1P13-201ENST00000406019 KCNQ4P56696 695 aa8.99□□□□□ -0.97
HMGB1P13-201ENST00000406019 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P13-201ENST00000406019 COL26A1Q96A83 441 aa8.99□□□□□ -0.97
HMGB1P13-201ENST00000406019 TGFBR3LH3BV60 316 aa8.98□□□□□ -0.97
HMGB1P13-201ENST00000406019 MDFIQ99750 246 aa8.98□□□□□ -0.97
HMGB1P13-201ENST00000406019 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
HMGB1P13-201ENST00000406019 SFSWAPQ12872 951 aaKnown RBP8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 COX20Q5RI15 118 aa8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 BTLAQ7Z6A9 289 aa8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 OXCT2Q9BYC2 517 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 SAP130Q9H0E3 1048 aa8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 KLK14Q9P0G3 267 aa8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 GJA3Q9Y6H8 435 aa8.97□□□□□ -0.97
HMGB1P13-201ENST00000406019 ARAFP10398 606 aa8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 BCRP11274 1271 aa8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 BMP4P12644 408 aa8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 FAM26DQ5JW98 314 aa8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 MARK1Q9P0L2 795 aa8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 ANKIB1Q9P2G1 1089 aa8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 NSFL1CQ9UNZ2 370 aaKnown RBP8.96□□□□□ -0.98
HMGB1P13-201ENST00000406019 TNFRSF10BO14763 440 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 OIP5O43482 229 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 ATP2B4P23634 1241 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 PHLDB3Q6NSJ2 640 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 SLCO4C1Q6ZQN7 724 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 SVOPQ8N4V2 548 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 BRD7Q9NPI1 651 aa8.95□□□□□ -0.98
HMGB1P13-201ENST00000406019 CARNS1A5YM72 827 aa8.94□□□□□ -0.98
HMGB1P13-201ENST00000406019 DGKZQ13574 1117 aa8.94□□□□□ -0.98
HMGB1P13-201ENST00000406019 ZNF468Q5VIY5 522 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P13-201ENST00000406019 SLC30A3Q99726 388 aa8.94□□□□□ -0.98
HMGB1P13-201ENST00000406019 AVENQ9NQS1 362 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P13-201ENST00000406019 ADAMTS8Q9UP79 889 aa8.94□□□□□ -0.98
HMGB1P13-201ENST00000406019 SHISA8B8ZZ34 492 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 HOXB4P17483 251 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 SSFA2P28290 1259 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 INPP5BP32019 993 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 GSK3AP49840 483 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 HIF1AQ16665 826 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 FCHSD1Q86WN1 690 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 CEP63Q96MT8 703 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 GGA1Q9UJY5 639 aa8.93□□□□□ -0.98
HMGB1P13-201ENST00000406019 GDF2Q9UK05 429 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms