RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 KIF3CO14782 793 aa20.24■□□□□ 0.83
TPM1-207ENST00000403994 PDE6BP35913 854 aa20.24■□□□□ 0.83
TPM1-207ENST00000403994 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
TPM1-207ENST00000403994 ST5P78524 1137 aa20.24■□□□□ 0.83
TPM1-207ENST00000403994 CCDC146Q8IYE0 955 aa20.24■□□□□ 0.83
TPM1-207ENST00000403994 RNF181Q9P0P0 153 aa20.24■□□□□ 0.83
TPM1-207ENST00000403994 SLX4Q8IY92 1834 aa20.24■□□□□ 0.83
TPM1-207ENST00000403994 NPHP1O15259 732 aa20.23■□□□□ 0.83
TPM1-207ENST00000403994 LMOD3Q0VAK6 560 aa20.23■□□□□ 0.83
TPM1-207ENST00000403994 PRKRIP1Q9H875 184 aaPredicted RBP20.23■□□□□ 0.83
TPM1-207ENST00000403994 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
TPM1-207ENST00000403994 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
TPM1-207ENST00000403994 WDR43Q15061 677 aaKnown RBP eCLIP20.22■□□□□ 0.83
TPM1-207ENST00000403994 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
TPM1-207ENST00000403994 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
TPM1-207ENST00000403994 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
TPM1-207ENST00000403994 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.83
TPM1-207ENST00000403994 HLFQ16534 295 aa20.2■□□□□ 0.82
TPM1-207ENST00000403994 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.826e-7■■□□□ 13.8
TPM1-207ENST00000403994 ANKRD36CQ5JPF3 1778 aa20.2■□□□□ 0.82
TPM1-207ENST00000403994 ERBB4Q15303 1308 aa20.2■□□□□ 0.82
TPM1-207ENST00000403994 NFKBIEO00221 500 aa20.19■□□□□ 0.82
TPM1-207ENST00000403994 PRELPP51888 382 aa20.19■□□□□ 0.82
TPM1-207ENST00000403994 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
TPM1-207ENST00000403994 NMRK2Q9NPI5 230 aa20.19■□□□□ 0.82
TPM1-207ENST00000403994 BABAM1Q9NWV8 329 aa20.19■□□□□ 0.82
TPM1-207ENST00000403994 MAP3K15Q6ZN16 1313 aa20.19■□□□□ 0.82
TPM1-207ENST00000403994 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
TPM1-207ENST00000403994 SRGNP10124 158 aa20.18■□□□□ 0.82
TPM1-207ENST00000403994 MYL6BP14649 208 aa20.18■□□□□ 0.82
TPM1-207ENST00000403994 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
TPM1-207ENST00000403994 LMNB1P20700 586 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 NEUROD2Q15784 382 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 KIF6Q6ZMV9 814 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 ABCC12Q96J65 1359 aa20.17■□□□□ 0.82
TPM1-207ENST00000403994 ERVV-1B6SEH8 477 aa20.16■□□□□ 0.82
TPM1-207ENST00000403994 C21orf2O43822 256 aa20.16■□□□□ 0.82
TPM1-207ENST00000403994 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
TPM1-207ENST00000403994 MASTLQ96GX5 879 aa20.16■□□□□ 0.82
TPM1-207ENST00000403994 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
TPM1-207ENST00000403994 IBTKQ9P2D0 1353 aaPredicted RBP20.16■□□□□ 0.82
TPM1-207ENST00000403994 FAM177BA6PVY3 158 aa20.15■□□□□ 0.82
TPM1-207ENST00000403994 LRP10Q7Z4F1 713 aa20.15■□□□□ 0.82
TPM1-207ENST00000403994 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
TPM1-207ENST00000403994 ZBTB3Q9H5J0 574 aa20.15■□□□□ 0.82
TPM1-207ENST00000403994 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
TPM1-207ENST00000403994 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
TPM1-207ENST00000403994 RIC1Q4ADV7 1423 aa20.15■□□□□ 0.82
TPM1-207ENST00000403994 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
TPM1-207ENST00000403994 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
TPM1-207ENST00000403994 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.81
TPM1-207ENST00000403994 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
TPM1-207ENST00000403994 HSPA6P17066 643 aa20.13■□□□□ 0.81
TPM1-207ENST00000403994 PDIA6Q15084 440 aa20.13■□□□□ 0.81
TPM1-207ENST00000403994 PROSER3Q2NL68 480 aa20.13■□□□□ 0.81
TPM1-207ENST00000403994 TOMM70O94826 608 aa20.12■□□□□ 0.81
TPM1-207ENST00000403994 NPR1P16066 1061 aa20.12■□□□□ 0.81
TPM1-207ENST00000403994 WDR90Q96KV7 1748 aa20.11■□□□□ 0.81
TPM1-207ENST00000403994 CHL1O00533 1208 aa20.11■□□□□ 0.81
TPM1-207ENST00000403994 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
TPM1-207ENST00000403994 GPTP24298 496 aa20.11■□□□□ 0.81
TPM1-207ENST00000403994 NYXQ9GZU5 481 aa20.11■□□□□ 0.81
TPM1-207ENST00000403994 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
TPM1-207ENST00000403994 LAMB2P55268 1798 aa20.11■□□□□ 0.81
TPM1-207ENST00000403994 ANXA1P04083 346 aa20.1■□□□□ 0.81
TPM1-207ENST00000403994 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
TPM1-207ENST00000403994 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
TPM1-207ENST00000403994 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
TPM1-207ENST00000403994 NUTM1Q86Y26 1132 aa20.1■□□□□ 0.81
TPM1-207ENST00000403994 GTF2E1P29083 439 aaPredicted RBP20.08■□□□□ 0.81
TPM1-207ENST00000403994 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.81
TPM1-207ENST00000403994 CRY2Q49AN0 593 aa20.08■□□□□ 0.81
TPM1-207ENST00000403994 ERFEQ4G0M1 354 aa20.08■□□□□ 0.81
TPM1-207ENST00000403994 ZNF34Q8IZ26 560 aa20.08■□□□□ 0.81
TPM1-207ENST00000403994 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
TPM1-207ENST00000403994 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
TPM1-207ENST00000403994 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
TPM1-207ENST00000403994 GLTPD2A6NH11 291 aa20.07■□□□□ 0.8
TPM1-207ENST00000403994 NTSR2O95665 410 aa20.07■□□□□ 0.8
TPM1-207ENST00000403994 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
TPM1-207ENST00000403994 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
TPM1-207ENST00000403994 SNED1Q8TER0 1413 aa20.07■□□□□ 0.8
TPM1-207ENST00000403994 SUSD4Q5VX71 490 aa20.06■□□□□ 0.8
TPM1-207ENST00000403994 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
TPM1-207ENST00000403994 RRAGCQ9HB90 399 aa20.06■□□□□ 0.8
TPM1-207ENST00000403994 HOXB7P09629 217 aa20.05■□□□□ 0.8
TPM1-207ENST00000403994 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
TPM1-207ENST00000403994 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
TPM1-207ENST00000403994 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
TPM1-207ENST00000403994 APAF1O14727 1248 aa20.04■□□□□ 0.8
TPM1-207ENST00000403994 PARP10Q53GL7 1025 aa20.04■□□□□ 0.8
TPM1-207ENST00000403994 HDGFL1Q5TGJ6 251 aa20.04■□□□□ 0.8
TPM1-207ENST00000403994 DDX21Q9NR30 783 aaKnown RBP eCLIP20.04■□□□□ 0.8
TPM1-207ENST00000403994 MBIPQ9NS73 344 aa20.04■□□□□ 0.8
TPM1-207ENST00000403994 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
TPM1-207ENST00000403994 DDX60Q8IY21 1712 aaKnown RBP20.03■□□□□ 0.8
TPM1-207ENST00000403994 COPS6Q7L5N1 327 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms