RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 POLA2Q14181 598 aa20.51■□□□□ 0.87
SNRNP70-202ENST00000401730 RAB11FIP3O75154 756 aa20.51■□□□□ 0.87
SNRNP70-202ENST00000401730 STK3Q13188 491 aa20.51■□□□□ 0.87
SNRNP70-202ENST00000401730 PPFIA3O75145 1194 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 SYT1P21579 422 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 ANAPC15P60006 121 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 GCP02774 474 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 TPM2P07951 284 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 RAD50Q92878 1312 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
SNRNP70-202ENST00000401730 ADCY9O60503 1353 aa20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 ANKRD24Q8TF21 1146 aa20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 TSPY26PQ9H489 355 aa20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 SUCLG2Q96I99 432 aa20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 DBF4Q9UBU7 674 aaPredicted RBP20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 BICC1Q9H694 974 aaKnown RBP20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 TAF6LQ9Y6J9 622 aa20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 PIK3C2AO00443 1686 aa20.49■□□□□ 0.87
SNRNP70-202ENST00000401730 WDR33Q9C0J8 1336 aaKnown RBP20.48■□□□□ 0.87
SNRNP70-202ENST00000401730 MBD3O95983 291 aa20.48■□□□□ 0.87
SNRNP70-202ENST00000401730 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
SNRNP70-202ENST00000401730 USP25Q9UHP3 1055 aa20.48■□□□□ 0.87
SNRNP70-202ENST00000401730 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 DNM1Q05193 864 aaKnown RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 C17orf53Q8N3J3 647 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 PDRG1Q9NUG6 133 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 NLRP2Q9NX02 1062 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 STX6O43752 255 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 GJB2P29033 226 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 FOSBP53539 338 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 GIMAP6Q6P9H5 292 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 ECHDC1Q9NTX5 307 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 LIMCH1Q9UPQ0 1083 aa20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-202ENST00000401730 AKAP4Q5JQC9 854 aa20.46■□□□□ 0.87
SNRNP70-202ENST00000401730 INTS4Q96HW7 963 aaKnown RBP20.46■□□□□ 0.87
SNRNP70-202ENST00000401730 G3BP1Q13283 466 aaKnown RBP eCLIP20.46■□□□□ 0.871e-7■□□□□ 8.5
SNRNP70-202ENST00000401730 CABLES1Q8TDN4 633 aa20.46■□□□□ 0.87
SNRNP70-202ENST00000401730 PDCL3Q9H2J4 239 aa20.46■□□□□ 0.87
SNRNP70-202ENST00000401730 NMIQ13287 307 aaPredicted RBP20.45■□□□□ 0.86
SNRNP70-202ENST00000401730 FSD1Q9BTV5 496 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 ATP5J2-PTCD1G3V325 749 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 ZSCAN22P10073 491 aaPredicted RBP20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 TAOK2Q9UL54 1235 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 TOPAZ1Q8N9V7 1692 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 TCHHQ07283 1943 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 SASH1O94885 1247 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 KSR2Q6VAB6 950 aa20.44■□□□□ 0.86
SNRNP70-202ENST00000401730 RPAP1Q9BWH6 1393 aaPredicted RBP20.43■□□□□ 0.86
SNRNP70-202ENST00000401730 DNTTIP2Q5QJE6 756 aaKnown RBP20.43■□□□□ 0.86
SNRNP70-202ENST00000401730 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
SNRNP70-202ENST00000401730 TTC14Q96N46 770 aa20.43■□□□□ 0.86
SNRNP70-202ENST00000401730 RBM8AQ9Y5S9 174 aaKnown RBP20.43■□□□□ 0.86
SNRNP70-202ENST00000401730 MYD88Q99836 296 aa20.43■□□□□ 0.86
SNRNP70-202ENST00000401730 CAMK4Q16566 473 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 ME3Q16798 604 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 ANKLE2Q86XL3 938 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 NWD1Q149M9 1564 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 CSB-PGBD3P0DP91 1061 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 SLFNL1Q499Z3 407 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 EPHA10Q5JZY3 1008 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 KAZALD1Q96I82 304 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 HYPKQ9NX55 129 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 TFIP11Q9UBB9 837 aaKnown RBP20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 A0A0D9SFI3 127 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 GRM8O00222 908 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 CHRNA2Q15822 529 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 HSP90AB4PQ58FF6 505 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 SYAP1Q96A49 352 aaPredicted RBP20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 NALCNQ8IZF0 1738 aa20.42■□□□□ 0.86
SNRNP70-202ENST00000401730 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
SNRNP70-202ENST00000401730 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
SNRNP70-202ENST00000401730 LRRC2Q9BYS8 371 aa20.41■□□□□ 0.86
SNRNP70-202ENST00000401730 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
SNRNP70-202ENST00000401730 COPS6Q7L5N1 327 aa20.41■□□□□ 0.86
SNRNP70-202ENST00000401730 XAGE3Q8WTP9 111 aa20.41■□□□□ 0.86
SNRNP70-202ENST00000401730 F13A1P00488 732 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 DNAJC2Q99543 621 aaKnown RBP20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 CCDC129Q6ZRS4 1044 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 RUFY2Q8WXA3 655 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 PDLIM2Q96JY6 352 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 PXDNQ92626 1479 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 TPCN1Q9ULQ1 816 aa20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
SNRNP70-202ENST00000401730 OFD1O75665 1012 aa20.39■□□□□ 0.85
SNRNP70-202ENST00000401730 ZKSCAN1P17029 563 aaPredicted RBP20.39■□□□□ 0.85
SNRNP70-202ENST00000401730 CREB3L3Q68CJ9 461 aa20.39■□□□□ 0.85
SNRNP70-202ENST00000401730 ZNF589Q86UQ0 364 aaPredicted RBP20.39■□□□□ 0.85
SNRNP70-202ENST00000401730 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms