RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 DDX17Q92841 729 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 CCDC85AQ96PX6 553 aaPredicted RBP15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 TBX22Q9Y458 520 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 KDM4AO75164 1064 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 MYD88Q99836 296 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 HSPA4P34932 840 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 RUFY3Q7L099 469 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 CKAP2LQ8IYA6 745 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 UQCRHLA0A096LP55 91 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 UQCRHP07919 91 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 BEND3Q5T5X7 828 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 ANKRD24Q8TF21 1146 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 CCDC39Q9UFE4 941 aa15.17■□□□□ 0.02
PPP4R1-202ENST00000400555 ZSCAN22P10073 491 aaPredicted RBP15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 PPP1R9BQ96SB3 815 aa15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 CHRNA2Q15822 529 aa15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 TSC1Q92574 1164 aa15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 TLR7Q9NYK1 1049 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 RICTORQ6R327 1708 aa15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 ANAPC15P60006 121 aa15.16■□□□□ 0.02
PPP4R1-202ENST00000400555 HTATSF1O43719 755 aaKnown RBP15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 NMIQ13287 307 aaPredicted RBP15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 IP6K1Q92551 441 aa15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 OVOS2A0A0J9YW53 1432 aa15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 OVOS2Q6IE36 1432 aa15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 GCP02774 474 aa15.15■□□□□ 0.02
PPP4R1-202ENST00000400555 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 CEP170BQ9Y4F5 1589 aaPredicted RBP15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 ADCY5O95622 1261 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 BICD2Q8TD16 824 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 SUCLG2Q96I99 432 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 ATP6V1DQ9Y5K8 247 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 PTPRUQ92729 1446 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 TTC5Q8N0Z6 440 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 STAP2Q9UGK3 403 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 DLC1Q96QB1 1528 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 H3BQV1 296 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 CHGBP05060 677 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 IFFO2Q5TF58 517 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 BLOC1S2Q6QNY1 142 aa15.14■□□□□ 0.01
PPP4R1-202ENST00000400555 RAD50Q92878 1312 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 CCDC129Q6ZRS4 1044 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 CUL4AQ13619 759 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
PPP4R1-202ENST00000400555 GRM8O00222 908 aa15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 RNMTO43148 476 aaKnown RBP15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 KSR2Q6VAB6 950 aa15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 PROSER2Q86WR7 435 aaPredicted RBP15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 DLG5Q8TDM6 1919 aa15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 F13A1P00488 732 aa15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 DDX46Q7L014 1031 aaKnown RBP15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 GUCY1B3Q02153 619 aa15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
PPP4R1-202ENST00000400555 OFD1O75665 1012 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 CCDC183Q5T5S1 534 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 COL9A3Q14050 684 aaPredicted RBP15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 FAM184AQ8NB25 1140 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 KNDC1Q76NI1 1749 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 ME3Q16798 604 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 CREB3L3Q68CJ9 461 aa15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 RIMS1Q86UR5 1692 aaKnown RBP15.11■□□□□ 0.01
PPP4R1-202ENST00000400555 TPM2P07951 284 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 PLEKHG1Q9ULL1 1385 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 USP31Q70CQ4 1352 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 A0A0D9SFI3 127 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 GIGYF1O75420 1035 aaPredicted RBP15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 RAB11FIP4Q86YS3 637 aa15.1■□□□□ 0.01
PPP4R1-202ENST00000400555 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 EVI5LQ96CN4 794 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 SEC62Q99442 399 aaKnown RBP15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 CHMP4AQ9BY43 222 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 TAF6LQ9Y6J9 622 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 SALL3Q9BXA9 1300 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 ERC1Q8IUD2 1116 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 KCNH5Q8NCM2 988 aa15.09■□□□□ 0.01
PPP4R1-202ENST00000400555 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms