RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 HTRA3P83110 453 aa23.48■■□□□ 1.35
SDR39U1-201ENST00000399395 CNKSR1Q969H4 720 aa23.48■■□□□ 1.35
SDR39U1-201ENST00000399395 FER1L6Q2WGJ9 1857 aa23.47■■□□□ 1.35
SDR39U1-201ENST00000399395 NEFMP07197 916 aa23.47■■□□□ 1.35
SDR39U1-201ENST00000399395 STYK1Q6J9G0 422 aa23.47■■□□□ 1.35
SDR39U1-201ENST00000399395 DPY19L2Q6NUT2 758 aa23.47■■□□□ 1.35
SDR39U1-201ENST00000399395 KLRG1Q96E93 195 aa23.47■■□□□ 1.35
SDR39U1-201ENST00000399395 NBPF5PQ86XG9 351 aaPredicted RBP23.46■■□□□ 1.35
SDR39U1-201ENST00000399395 TAOK3Q9H2K8 898 aa23.46■■□□□ 1.35
SDR39U1-201ENST00000399395 ARFGEF2Q9Y6D5 1785 aa23.46■■□□□ 1.35
SDR39U1-201ENST00000399395 DICER1Q9UPY3 1922 aaKnown RBP23.45■■□□□ 1.35
SDR39U1-201ENST00000399395 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 ERFEQ4G0M1 354 aa23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 SOGA3Q5TF21 947 aa23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 MASTLQ96GX5 879 aa23.45■■□□□ 1.34
SDR39U1-201ENST00000399395 LTBP3Q9NS15 1303 aa23.44■■□□□ 1.34
SDR39U1-201ENST00000399395 PRPF40BQ6NWY9 871 aaKnown RBP23.44■■□□□ 1.34
SDR39U1-201ENST00000399395 SLX4Q8IY92 1834 aa23.43■■□□□ 1.34
SDR39U1-201ENST00000399395 LAMB4A4D0S4 1761 aa23.43■■□□□ 1.34
SDR39U1-201ENST00000399395 SRGNP10124 158 aa23.43■■□□□ 1.34
SDR39U1-201ENST00000399395 TAF7Q15545 349 aaPredicted RBP23.4■■□□□ 1.34
SDR39U1-201ENST00000399395 JMYQ8N9B5 988 aa23.4■■□□□ 1.34
SDR39U1-201ENST00000399395 NIP7Q9Y221 180 aaKnown RBP eCLIP23.4■■□□□ 1.34
SDR39U1-201ENST00000399395 RGL2O15211 777 aa23.39■■□□□ 1.33
SDR39U1-201ENST00000399395 NBPF26B4DH59 902 aa23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 NPR1P16066 1061 aa23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 CCDC93Q567U6 631 aa23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 NBPF10Q6P3W6 841 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 TPTE2Q6XPS3 522 aa23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 NBPF15Q8N660 670 aa23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 PNISRQ8TF01 805 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-201ENST00000399395 DLG5Q8TDM6 1919 aa23.37■■□□□ 1.33
SDR39U1-201ENST00000399395 FAM177BA6PVY3 158 aa23.36■■□□□ 1.33
SDR39U1-201ENST00000399395 GTF2E1P29083 439 aaPredicted RBP23.36■■□□□ 1.33
SDR39U1-201ENST00000399395 KDM3BQ7LBC6 1761 aa23.36■■□□□ 1.33
SDR39U1-201ENST00000399395 MIS18AQ9NYP9 233 aa23.35■■□□□ 1.33
SDR39U1-201ENST00000399395 POTECB2RU33 542 aa23.34■■□□□ 1.33
SDR39U1-201ENST00000399395 DDNO94850 711 aaPredicted RBP23.33■■□□□ 1.33
SDR39U1-201ENST00000399395 MAPK8IP3Q9UPT6 1336 aa23.33■■□□□ 1.32
SDR39U1-201ENST00000399395 NGEFQ8N5V2 710 aa23.32■■□□□ 1.32
SDR39U1-201ENST00000399395 KLRG2A4D1S0 409 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 IQCA1LA6NCM1 817 aa23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 FKBP4Q02790 459 aaKnown RBP eCLIP23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 HLFQ16534 295 aa23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 KIF6Q6ZMV9 814 aa23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 NYXQ9GZU5 481 aa23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
SDR39U1-201ENST00000399395 CHADLQ6NUI6 762 aa23.3■■□□□ 1.32
SDR39U1-201ENST00000399395 C7orf43Q8WVR3 580 aa23.3■■□□□ 1.32
SDR39U1-201ENST00000399395 RTKN2Q8IZC4 609 aa23.29■■□□□ 1.32
SDR39U1-201ENST00000399395 MAP3K15Q6ZN16 1313 aa23.29■■□□□ 1.32
SDR39U1-201ENST00000399395 ERVV-1B6SEH8 477 aa23.28■■□□□ 1.32
SDR39U1-201ENST00000399395 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
SDR39U1-201ENST00000399395 ZNF277Q9NRM2 450 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-201ENST00000399395 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-201ENST00000399395 ABCC12Q96J65 1359 aa23.27■■□□□ 1.32
SDR39U1-201ENST00000399395 SCN4AP35499 1836 aa23.27■■□□□ 1.32
SDR39U1-201ENST00000399395 NUP98P52948 1817 aa23.27■■□□□ 1.32
SDR39U1-201ENST00000399395 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-201ENST00000399395 PLEKHF1Q96S99 279 aa23.27■■□□□ 1.32
SDR39U1-201ENST00000399395 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-201ENST00000399395 MYL6BP14649 208 aa23.26■■□□□ 1.31
SDR39U1-201ENST00000399395 L3MBTL3Q96JM7 780 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-201ENST00000399395 OLFM4Q6UX06 510 aa23.25■■□□□ 1.31
SDR39U1-201ENST00000399395 IBTKQ9P2D0 1353 aaPredicted RBP23.25■■□□□ 1.31
SDR39U1-201ENST00000399395 POTEIP0CG38 1075 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 POTEJP0CG39 1038 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 TTLL7Q6ZT98 887 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 LDHDQ86WU2 507 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 NUTM1Q86Y26 1132 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 RPGRQ92834 1020 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 ZBTB3Q9H5J0 574 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 CREBZFQ9NS37 354 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 ZNF541Q9H0D2 1346 aa23.24■■□□□ 1.31
SDR39U1-201ENST00000399395 GPTP24298 496 aa23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 IARSP41252 1262 aaKnown RBP23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 CRY2Q49AN0 593 aa23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 COL13A1Q5TAT6 717 aaPredicted RBP23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 TAF1DQ9H5J8 278 aaPredicted RBP23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 ERBB4Q15303 1308 aa23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
SDR39U1-201ENST00000399395 SYNE4Q8N205 404 aa23.22■■□□□ 1.31
SDR39U1-201ENST00000399395 TSPYL4Q9UJ04 414 aa23.22■■□□□ 1.31
SDR39U1-201ENST00000399395 EAPPQ56P03 285 aaPredicted RBP23.21■■□□□ 1.31
SDR39U1-201ENST00000399395 HACL1Q9UJ83 578 aa23.21■■□□□ 1.31
SDR39U1-201ENST00000399395 UBN2Q6ZU65 1347 aa23.2■■□□□ 1.3
SDR39U1-201ENST00000399395 CC2D2BQ6DHV5 1058 aa23.2■■□□□ 1.3
SDR39U1-201ENST00000399395 TNS4Q8IZW8 715 aa23.2■■□□□ 1.3
SDR39U1-201ENST00000399395 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
SDR39U1-201ENST00000399395 PSMD1Q99460 953 aa23.2■■□□□ 1.3
SDR39U1-201ENST00000399395 MKRN1Q9UHC7 482 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-201ENST00000399395 LMOD3Q0VAK6 560 aa23.18■■□□□ 1.3
SDR39U1-201ENST00000399395 GIGYF2Q6Y7W6 1299 aaKnown RBP23.18■■□□□ 1.3
SDR39U1-201ENST00000399395 CLEC11AQ9Y240 323 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms